Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046836_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:108000755:108003545:1 gene:Zm00001d046836 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sas10/Utp3/C1D family
Sequence

ATGGCGGCAGCATCCGCCGCCGAAGCTAACAGCGTGAGCAATGACGAATTCCTCGTACGC
GACGACGTGCCGGGGCTGCTCGCCGCTCTCAAGGAGATGAAGGACGGACTGGACCTCGTC
AGGGGCAAGGTCGAGGCCATCACCCGGAAGGTCAAGGCGAACCAGTTGCCGGCGGGCAAC
GGGATCGGGTACCTAGAAGCGAAGAACCACATGCTTCTTGGCTACTGCCAGGACATCGTC
TACTACCTGCTCCGCAAGACCAAGGGGCTCTCGGTGGATGGCCACCCCGTTGTACGGAGC
CTTGTCGAGATTAGGCTGTTTCTGGAGAAGATTCGTCCGATTGACAAGAAGGCAGAGTAC
CAAATCCAGAAGCTCACCAATGCCGCTGACAATGCAACTGCTCGAGAGAAGGCAGGAAAT
GCAGAGGTGAAGGGGAAGGACGGGCATTCGGATGAGGAAGACCTCCTGATGTATAGGCCA
AACCCAGAGATGATGGACACAAAGCCTGGTCCTGATGGGCAGGACACTGATGGTGTTTAC
CGTCCTCCAAAATTTATGCCTACTAGCATGGATGATGAAGAGAAACGTCATAAAAAAGAT
TCAAGGAGAGATAAAGCGATAGCCCGAGTGGCAACAGAAAATCCTTATATTAAAGAGATA
ATTGATGATGCTGCAGATAGACCTGAAGAGTGGAAGGAAACAGTGGGCGATGAAAGCAGG
GAATTTGGGAGGTACATGAGACAGAGAGAGGAGCAAGAGAAGCAGGAAGAGGAGTTGTTC
ACTCGGGCTCCTGTTACTAAACGTGATAAGCAGATGGAGAAGCGCATAAGGAGACAACTT
CATGGGCTAGGAGGCTTAACTGACGGTTTCGACCTTGGGATGAACATGCTGTTGGGAGGA
GACAAGGAAGATGATGGCGGTTCAAGCAAACCGCACGGCAAGAGCGGAAACCGAAAGAAG
CATCTGAAGAGCAGCAAGAAGAGGAAGAGGCATTAG

Peptide Sequence

PEP ID

Zm00001d046836_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:108000755:108003545:1 gene:Zm00001d046836 transcript:Zm00001d046836_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sas10/Utp3/C1D family
Sequence

MAAASAAEANSVSNDEFLVRDDVPGLLAALKEMKDGLDLVRGKVEAITRKVKANQLPAGN
GIGYLEAKNHMLLGYCQDIVYYLLRKTKGLSVDGHPVVRSLVEIRLFLEKIRPIDKKAEY
QIQKLTNAADNATAREKAGNAEVKGKDGHSDEEDLLMYRPNPEMMDTKPGPDGQDTDGVY
RPPKFMPTSMDDEEKRHKKDSRRDKAIARVATENPYIKEIIDDAADRPEEWKETVGDESR
EFGRYMRQREEQEKQEEELFTRAPVTKRDKQMEKRIRRQLHGLGGLTDGFDLGMNMLLGG
DKEDDGGSSKPHGKSGNRKKHLKSSKKRKRH

Transcript Sequence

Transcript ID

Zm00001d046836_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:108000755:108003545:1 gene:Zm00001d046836 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sas10/Utp3/C1D family
Sequence

AGAGACGAGTCGATGAGTGCGACTGCAGACAATCTTGTTTCCTTCTCTCCCCTCCCCAAA
CCCCAGCGCGGCCTCCGCCACCGCGTTCCGGGACGAGTCACCGCTCCGTCGGCACGGCAG
CTTGCTCCAGCCCACGCCACGCGCTACGTCGTCGCGGTCGATCCTCCCGTGAGGCAGCCG
TGTCGCTAGGCACCGCCTATTTCTCGAACAAAGTCGCTCGCTACCATGGCGGCAGCATCC
GCCGCCGAAGCTAACAGCGTGAGCAATGACGAATTCCTCGTACGCGACGACGTGCCGGGG
CTGCTCGCCGCTCTCAAGGAGATGAAGGACGGACTGGACCTCGTCAGGGGCAAGGTCGAG
GCCATCACCCGGAAGGTCAAGGCGAACCAGTTGCCGGCGGGCAACGGGATCGGGTACCTA
GAAGCGAAGAACCACATGCTTCTTGGCTACTGCCAGGACATCGTCTACTACCTGCTCCGC
AAGACCAAGGGGCTCTCGGTGGATGGCCACCCCGTTGTACGGAGCCTTGTCGAGATTAGG
CTGTTTCTGGAGAAGATTCGTCCGATTGACAAGAAGGCAGAGTACCAAATCCAGAAGCTC
ACCAATGCCGCTGACAATGCAACTGCTCGAGAGAAGGCAGGAAATGCAGAGGTGAAGGGG
AAGGACGGGCATTCGGATGAGGAAGACCTCCTGATGTATAGGCCAAACCCAGAGATGATG
GACACAAAGCCTGGTCCTGATGGGCAGGACACTGATGGTGTTTACCGTCCTCCAAAATTT
ATGCCTACTAGCATGGATGATGAAGAGAAACGTCATAAAAAAGATTCAAGGAGAGATAAA
GCGATAGCCCGAGTGGCAACAGAAAATCCTTATATTAAAGAGATAATTGATGATGCTGCA
GATAGACCTGAAGAGTGGAAGGAAACAGTGGGCGATGAAAGCAGGGAATTTGGGAGGTAC
ATGAGACAGAGAGAGGAGCAAGAGAAGCAGGAAGAGGAGTTGTTCACTCGGGCTCCTGTT
ACTAAACGTGATAAGCAGATGGAGAAGCGCATAAGGAGACAACTTCATGGGCTAGGAGGC
TTAACTGACGGTTTCGACCTTGGGATGAACATGCTGTTGGGAGGAGACAAGGAAGATGAT
GGCGGTTCAAGCAAACCGCACGGCAAGAGCGGAAACCGAAAGAAGCATCTGAAGAGCAGC
AAGAAGAGGAAGAGGCATTAGCCTGGACCCACAGTCCCACACTGCTGTAAGCCTGTAACA
CTTCAACATACTGATAAAGCCTAGAAGACGGTTCAAGCAAGCCACACAGAAGCTGAAGAA
AATACCAAGAAACCAAGTAGAGAAGAGGCTTTGGTTCCTCAAAAGTGTAGGAAAATATGA
TCTGAGCGACTGATCCTGAGCCATTGGAACAGTATAAATTAGGGCTTGTTCGTTTTGCTC
TCAATCCATATGGATTGACCGTGATTGAGTGGATTTCAAACCCGAATAAGTCAAAATCCT
TCATAATTTTTCCAATACCATCCAATCCACATGTATTTGAAATAATCGAACAAGACCTTA
TATGGCTTGAACGTGGTAGGGTAGCAAATTTTGTTCATTGTAGAGTATCCCAGATGTGAT
AATTGTTTCCCCG