Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046740_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:9:103969409:103972181:1 gene:Zm00001d046740 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 318 description:Zinc finger CCCH domain-containing protein 52
Sequence

ATGACCAACTTGGGTGGGCCACCTGTTCCGGCTCCCCCAGGAAGGATGCCTATGGGACCT
GGTGGTCCTGATGGGCCACCTTCACCTGCTCTGAAGACTCGCTTGTGTAACAAGTACAAC
ACTGCAGAAGGATGTAAATGGGGGAGCAAATGCCACTTTGCTCATGGAGAGAGGGAGCTT
GGAAAGCCCCTGCAGATGGACAACTCGATGGGAGCTCCTCCAATGGGTCCAGGGCCAAAC
GGTCACTTCATGCCACCTCCAATGCCTATCCCAGACATGGTTCCTCACTCCACATTCGGT
GCTTCGGCCACAGCCAAGATCAGTGTCGATGCATCCCTTGCTGGCGCCATCATTGGGAAG
AGTGGTATCAACACAAAGCATATATCCCGAGTGACTGGGGCCAAGTTAGCCATCCGGGAC
AATGAGGCTGATCCCAACCATAAAAACATCGAGCTCGAGGGAACGTTTGACCAGATCAAG
CACGCTAGCGCAATGGTCACAGAGTTGATTGTCCGCATCAGTGGTAAGGTGCCTCCACAA
GCAAAGAACAACCCAGGCAGGGGGCCTGGTTCTCATGCTGGGGGTCCTGCAAGCAACTTC
AAGACCAAGTTGTGCGAGAACTTCAACAAAGGCTCCTGCACCTTTGGAGACAGGTGCCAC
TTTGCCCATGGCGAAAGTGAGTTGCGCAAACCTGCTGCTGCTTGA

Peptide Sequence

PEP ID

Zm00001d046740_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:9:103969409:103972181:1 gene:Zm00001d046740 transcript:Zm00001d046740_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 318 description:Zinc finger CCCH domain-containing protein 52
Sequence

MTNLGGPPVPAPPGRMPMGPGGPDGPPSPALKTRLCNKYNTAEGCKWGSKCHFAHGEREL
GKPLQMDNSMGAPPMGPGPNGHFMPPPMPIPDMVPHSTFGASATAKISVDASLAGAIIGK
SGINTKHISRVTGAKLAIRDNEADPNHKNIELEGTFDQIKHASAMVTELIVRISGKVPPQ
AKNNPGRGPGSHAGGPASNFKTKLCENFNKGSCTFGDRCHFAHGESELRKPAAA

Transcript Sequence

Transcript ID

Zm00001d046740_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:103969409:103972181:1 gene:Zm00001d046740 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 318 description:Zinc finger CCCH domain-containing protein 52
Sequence

GCGCTGCGCCAAGCCTCCCCACCTCTCTCGTCTCTTCTCCACCCGCCGCCCTCGTGGGAG
TGAAACCCTAGCTAGGGTTCTGCCCGCCGCCGCCTTCGATCAAGACGCCTGCAGCCTTAG
CGCGAGCCCGCCATGGACACAGGACGCAAGCGCATCGCGCCGGGGGGCGCCAACGGCGCG
GGCGGCCCGAAGCGCGCGAGAGCACTGCGGGTTGTCCCTTTGGTTCAAATTGCCATTTTC
TCCATAACTTCCCGGGTGGCTACCTGGCGGTTTCAAAGATGACCAACTTGGGTGGGCCAC
CTGTTCCGGCTCCCCCAGGAAGGATGCCTATGGGACCTGGTGGTCCTGATGGGCCACCTT
CACCTGCTCTGAAGACTCGCTTGTGTAACAAGTACAACACTGCAGAAGGATGTAAATGGG
GGAGCAAATGCCACTTTGCTCATGGAGAGAGGGAGCTTGGAAAGCCCCTGCAGATGGACA
ACTCGATGGGAGCTCCTCCAATGGGTCCAGGGCCAAACGGTCACTTCATGCCACCTCCAA
TGCCTATCCCAGACATGGTTCCTCACTCCACATTCGGTGCTTCGGCCACAGCCAAGATCA
GTGTCGATGCATCCCTTGCTGGCGCCATCATTGGGAAGAGTGGTATCAACACAAAGCATA
TATCCCGAGTGACTGGGGCCAAGTTAGCCATCCGGGACAATGAGGCTGATCCCAACCATA
AAAACATCGAGCTCGAGGGAACGTTTGACCAGATCAAGCACGCTAGCGCAATGGTCACAG
AGTTGATTGTCCGCATCAGTGGTAAGGTGCCTCCACAAGCAAAGAACAACCCAGGCAGGG
GGCCTGGTTCTCATGCTGGGGGTCCTGCAAGCAACTTCAAGACCAAGTTGTGCGAGAACT
TCAACAAAGGCTCCTGCACCTTTGGAGACAGGTGCCACTTTGCCCATGGCGAAAGTGAGT
TGCGCAAACCTGCTGCTGCTTGATAGATGTGTTTAGTGTGGCTTGCGGTGATTACTCTGC
CTGTGTGGCTGAATAACACCACAGTCGCCTATGGTGAGATGTACTGGGCCACGTGCTGCC
TGAGAGAGATCATTTCCATCGCTTGCGTAGAGACAATGGCCGTTTTTTAGGATTTGTAGG
ATTGCCGTATTGTTCTGTTCGATTTATATCTAACCCTGCCAGAATCCTATTTTTGTACCG
TTTCTTAGCTACTAATTGGTGCCAGATCATTGTGGTTCTGTTGACTCGAGAATAGTTGCT
ATCGATGGTATGGGTTTGTGAATTATTGATAGCATTTTTGAAATC