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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046723_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:103579654:103582402:-1 gene:Zm00001d046723 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin-A20
Sequence

ATGGTCAGCTCCCTGCCGCTGTCCTCGTTGCTGCTGCTGCTGCTGCTGCTCTCCGCAGCC
AGCTTCGGCGGCGGCGTAAGGCTCGGCGATGGTGGCTACGAGGACTGGAGGCTCGGCACC
GCCACCTACGTCAAGGAGTTCCAGTCACACCCTCTCAATGACGGCGGTGGCGCCTGCGGG
TACGGCGACCTGGACATCTTCAGGTACGGGCGCTACACGGCGGGGCTGAGCGCGGCGCTG
TTCGGGCGCGGCGGCGCCTGCGGCGGCTGCTACGAGCTGCGGTGCGTCAACCACATCCAG
TGGTGCCTCCGGGGCAGCCCCACGGTGGTGGTGACGGCGACGGACTTCTGCCCGGCCAAC
ATGGGCCTCGCCGACGACGACGCCGGCGGCTGGTGCAACTTCCCGCGGGAGCACCTCGAG
CTGTCGGAGGCCGCGTTCCTCCGCGTCGCCAAGGCCAAGGCCGGCATCGTGCCGGTGCAG
TTCCGGAGGGTGAGCTGCGACAGGGCGGGCGGCATGCGGTTCACCATCACCGGTAGCGCC
CACTTCCTGCAGGTGCTCATCACCAACGTGGCGGCGGACGGCGAGGTGGCGGCCGTGAAG
GTGAAGGGCTCGAGGACGGGGTGGATCCCGATGGGGCGGAACTGGGGCCAGAACTGGCAG
TGCGACGCCGACCTCCGCGCCCAGCCGCTGTCGTTCGAGGTCACCGGCGGGAGGGGCAGG
ACGGTCACCGCCTACAGCGTGGCGCCGGCGGACTGGATGTTCGCGCAGACGTTCGAGGGC
AAGCAGTTCGCCGAGTAG

Peptide Sequence

PEP ID

Zm00001d046723_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:103579654:103582402:-1 gene:Zm00001d046723 transcript:Zm00001d046723_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin-A20
Sequence

MVSSLPLSSLLLLLLLLSAASFGGGVRLGDGGYEDWRLGTATYVKEFQSHPLNDGGGACG
YGDLDIFRYGRYTAGLSAALFGRGGACGGCYELRCVNHIQWCLRGSPTVVVTATDFCPAN
MGLADDDAGGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTITGSA
HFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGR
TVTAYSVAPADWMFAQTFEGKQFAE

Transcript Sequence

Transcript ID

Zm00001d046723_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:103579654:103582402:-1 gene:Zm00001d046723 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin-A20
Sequence

TCCCCTCTGCCCCCGCTCTGTCATCTTTGACTGCCCCTGTCCGGTCTCCTCCCCTCCATC
CCACTCCACGCCACCCCCACACCCCACCGGCCAAGCAAACACGCTGCACATTTCAGTTCA
GACAGTCCAAGAACAGCACCAAGAAAGACTCCTTGCCGCTCTTCTTGCTTGGCTACTGAC
TAGGAGAGCTCCCTGCCGCTGGTTGATCAACAGAGAGGCAGGCGGACGGCATGGTCAGCT
CCCTGCCGCTGTCCTCGTTGCTGCTGCTGCTGCTGCTGCTCTCCGCAGCCAGCTTCGGCG
GCGGCGTAAGGCTCGGCGATGGTGGCTACGAGGACTGGAGGCTCGGCACCGCCACCTACG
TCAAGGAGTTCCAGTCACACCCTCTCAATGACGGCGGTGGCGCCTGCGGGTACGGCGACC
TGGACATCTTCAGGTACGGGCGCTACACGGCGGGGCTGAGCGCGGCGCTGTTCGGGCGCG
GCGGCGCCTGCGGCGGCTGCTACGAGCTGCGGTGCGTCAACCACATCCAGTGGTGCCTCC
GGGGCAGCCCCACGGTGGTGGTGACGGCGACGGACTTCTGCCCGGCCAACATGGGCCTCG
CCGACGACGACGCCGGCGGCTGGTGCAACTTCCCGCGGGAGCACCTCGAGCTGTCGGAGG
CCGCGTTCCTCCGCGTCGCCAAGGCCAAGGCCGGCATCGTGCCGGTGCAGTTCCGGAGGG
TGAGCTGCGACAGGGCGGGCGGCATGCGGTTCACCATCACCGGTAGCGCCCACTTCCTGC
AGGTGCTCATCACCAACGTGGCGGCGGACGGCGAGGTGGCGGCCGTGAAGGTGAAGGGCT
CGAGGACGGGGTGGATCCCGATGGGGCGGAACTGGGGCCAGAACTGGCAGTGCGACGCCG
ACCTCCGCGCCCAGCCGCTGTCGTTCGAGGTCACCGGCGGGAGGGGCAGGACGGTCACCG
CCTACAGCGTGGCGCCGGCGGACTGGATGTTCGCGCAGACGTTCGAGGGCAAGCAGTTCG
CCGAGTAGAGATCGACGCCGAAAACCAAGTCTCCGGCGGTGGTGATGTAAGTAGAATTAT
ACGGGTGGCTTCTTGCTCGCGAGTCGTGACCGGTGACTCGACAAAACGAGACGTATTGAA
TGGCGAAAGGATTTCCAGTCATAAGAAAGTGGCAGTCCAAATATGCGTGATGATGGATCG
TCGGTAACGGTACAAGATTAGGCGATCACCGTGAGTTCAGACTTGTGTACTCTGGCTTAA
CGGGAGAGAACGCAATGTGAAAAAGTGTGTCTGGTATCGT