Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046691_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:9:102506726:102518761:-1 gene:Zm00001d046691 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellulose synthase A catalytic subunit 5 [UDP-forming]
Sequence	ATGGTCCAGGTCATCACTGGTAATGATTGTGTCATGGATGATGCTGGAAATAAGCTGCCT TGGTTGGTCTATGTTTCACGTGAGAAAAGGCCTGGACATGATCATCATAAAAAAGCCGGT GCCTTGAATGCATTGCTGCGAACTTCAGCAATTCTCTCCAACGCACCTTTTGTACTGAAT GTGGATTGTGACCACTATATGAACAATAGCAAAGCGCTACGGGAGGCAATGTGTTTTCTG ATGGACCCAGTGTTGGGAGAGAAGATTTGTTATGTTCAATTTCCGCAGAGATTTGATGGC ATTGATCAACACGATAGATATTCAAACCACAATGTTGTGTTTTTTGATATTAACATGAAA GGTCTTGATGGGATCCAAGGACCAATATATGTTGGGACTGGTTGTGTTTTCAGAAGACAT GCTTTGTATGGTTATGATGCCCCAACTGCAACAAAACCTCCTAGCAAGACATGTAACTGC TGGCCAAAGTCATGCTGCTTGTGTTGTGGATCGAAAAGAAAATGTTCCAAAGCTAAGAAA AAACAAGAACACCAAAAGAAAGTGAAATGCAGGAATGCGTCCAAGCAAGTGCATGCTCTC GAAGTAGCTGGAAGAGAAACTGCACCTCCTGTGCCTCGAGAAAAGTTTGAGAAGAGATTT GGGCAGTCAGATGCATTTTTGGCTTCAACATTGCAAGATAATGGTGAAGGTTGTCACTTC GACATGCTCAAAAGCCTTGATGATTGCATCCATGTGCTAAGTTGTGGGTACGAGAATAAG ACACAATGGGGGAAAGAGGTTGGTTGGATTTATGGATCTGTCACTGAGGATATCCTCACG GGCTTCAAGATGCACTGCCATGGTTGGCGATCTGTGTACTGCATGCCCAAGAGACCAGCA TTCAAAGGATCTGCACCTATCAATCTCACTGATCGTCTCCATCAAGTTCTAAGATGGGCA CTTGGCTCTGTGGAGATCTTCCTTAGCAAGCACTGCCCAATATGGTACGGGTATCGATGT GGTCTGAAACCATTGGAGAGGTTGTCATATATCAACTGTGTCATCTATCCATGGACATCA ATCCCGCTGCTAATCTACTGCGCCCTGCCAGCGTTTTGCCTGTTATCAGGGAAGTTTATG GTGCCTGAGATGAATGTCTATTCGAGCATATTGTTCATAGCTCTATTTGTCTCCATAGCA GCTACCAGCATCCTAGAGATGCAGTGGGGAGGAGTCGGAATCGACGATTGGTGGAGAAAC GAGCAGTTCTGGGTCATTGGCGGTGTCTCCTCGCACCTCTTTGCGCTGTGCCAGGGGCTC CTCAAGGTTCTCGGTGGCGTGAGTACCAAGTTCAGGGTGACTCTGAAGGGAGGCGGCACG GACGAGTTCTCAGAGCTGTACGAGTTCAAGTGGACCTGGCTACTGGTCCCTCCGATGACA CTGCTCCTGCTAAACGTCGTCGCGGTCTTGGCCGGCGTGTCCAAGGCGGTGACGGACGGG TACGAAGCCTGGGGCCCGCTGCTCGGCAAGCTGTTCTTCTCCTTCTGGGTCGTCCTCCAC CTCCACCCGTTCCTCAAGGGCGTGATCGGCAGGCAGGACAGGGTGCCGACCGTTGTCGTT GTGCTGTCAATGCTACTGGCATCCATACTCTCTCTGTTGTGGGTCCGGGTGAGCCCCTTC GCCACCAAGTTCGATGGACCTGTTCTGGAGGTCTGTGGCTTGGATTGTGAGTGA

Peptide Sequence

PEP ID	Zm00001d046691_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:9:102506726:102518761:-1 gene:Zm00001d046691 transcript:Zm00001d046691_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellulose synthase A catalytic subunit 5 [UDP-forming]
Sequence	MVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRTSAILSNAPFVLN VDCDHYMNNSKALREAMCFLMDPVLGEKICYVQFPQRFDGIDQHDRYSNHNVVFFDINMK GLDGIQGPIYVGTGCVFRRHALYGYDAPTATKPPSKTCNCWPKSCCLCCGSKRKCSKAKK KQEHQKKVKCRNASKQVHALEVAGRETAPPVPREKFEKRFGQSDAFLASTLQDNGEGCHF DMLKSLDDCIHVLSCGYENKTQWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPA FKGSAPINLTDRLHQVLRWALGSVEIFLSKHCPIWYGYRCGLKPLERLSYINCVIYPWTS IPLLIYCALPAFCLLSGKFMVPEMNVYSSILFIALFVSIAATSILEMQWGGVGIDDWWRN EQFWVIGGVSSHLFALCQGLLKVLGGVSTKFRVTLKGGGTDEFSELYEFKWTWLLVPPMT LLLLNVVAVLAGVSKAVTDGYEAWGPLLGKLFFSFWVVLHLHPFLKGVIGRQDRVPTVVV VLSMLLASILSLLWVRVSPFATKFDGPVLEVCGLDCE

Transcript Sequence

Transcript ID	Zm00001d046691_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:102506726:102518761:-1 gene:Zm00001d046691 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellulose synthase A catalytic subunit 5 [UDP-forming]
Sequence	GGCGCCGTCGTACCCCTTCTCGCCGCTCGCCCACGGCCCACTCCACACACCCGAGTGTCC CTTCGCCGAGTGCCGACCGAGGGTCTCCCCGTTGTCGCCGATCCAGAGAGAGAGAGAGAG AGAGAGAGAGTTGTAGAGGCGGACAGGCGGCCCACGGCCAAGCCTGGGGGAGGACCTCCA TTGTTGCCGCATTGGCGTATTGTGTCTGGTTATCAGACTGAGACGACAGCGTGTGCTTTC ATTTATCAGGCTGACGCGAGGCACCGAGAGTCCGAGACCGCGCGATGGTGGCGCAGGCAG ACGCGGGGGAGACGGGTGGCGTAGGTGCCGATGGACGCGGACGTCGTAACAGGGAGAGTG AGCGTGGGAAGGAGAGGTGGAGTGTACCCTGTGATGCGCGTGCGGCGGTGCGGGTCTCAC GGGGGAGGGGTTCTAATTTGGGGTTGGGGCGAAGATGGGGGGATCTTGGTTGGTTGCGCA GTGTACCGCGGCGTAGAGGCGGAGGCGCATCGGACGGATGGACGCTGGAGGGCTCGGCTT CCTCGTCGCGGGCTCCCGGCGCGAGTTCGTCGTCCTCAACGTCGACGATTTCTCCAAGCA AGGATCTTCACAGGGCTGTCCAGACTATATTTGTCAGATATGTGGAGATGACATTGACAT ACTCCAGGAAGAAAATGAGTATTTCGTCGCATGTAATGATTGTGCTTTTCCTGTTTGCCG CACTTGCTATGAGTACGAGCGTCAGGAGGGCACACAAGTATGCCCTCGGTGCAAGACCCG GTACAAACGCCACAAAGGTAGTCCTCGAGTCCATGGGGATGAGGAAGAAGAAGGTTCTGA TGACATTGAGAGTGAGTTTGCTTCCAGTATAGCTGGACGATCAAATATAGTGCATCCATA CCGTGTCTCTGTGGCAGAAAGCTCCATCAACTCATGGGACATTGATAGTGTCAGTATCAC CAACAGTGGAGCTAGTGTCCATTTTTATGAAGAGCATGTTGGAACTCCAACAAATCATCA TGCTCTTGTTGTTCACCCTAACACCGGAGAAATTATGCGATATAATCCCTTGCAAACAAG ACCAATAAATCCCAATAGAGACCTAGCATTGTATGGCTATGGATCAGTTGCCTGGAAGAA CAGAGTTGAGTGGAAAACAAAACAACAGAATAAAATGCAAAAGGTCTCATCTGATGGTGA AGGATCTGATTTAAATGATTTTGACAGCGACTGCGATATTCCCAGGTGTGCTGAAAGTAA GCAGCAACTATCAAGGAAGGTGCCTATTCCATCTAGCAAAATAAATCCTTACAGGATCGT AATCAGTTTGCGGCTAGCCATTCTTGGCTTATTTTTCCACTATCGGATTCTGAATCCTGT ACATGATGCTCACTGGTTGTGGTTGACTTCAGTTATTTGTGAAATTTGGTTCGCCTTTTC ATGGATTTTAGACCAATTTCCCAAGTGGCACCCAATACAGAGAGAAACATACTTAGATCG ATTATCATTAAGGTACGAGAAGGAAGGAAAACCACCAGAACTTGCTCGGATCGATGTATT TGTCAGTACAGTTGATCCAATGAAGGAGCCTCCTTTAATTATTGCAAACACAGTTTTGTC CATACTGGCTGTGGATTATCCTGTTGATAAAGTTTGCTGCTATGTGTCGGATGATGGTGC TGCAATGCTTACTTTTGAAGCACTTACAGAAACATGTCTATTTGCACGAAAATGGGTTCC CTTCTGTAAGAAACACAAAATCGAGCCTCGGGCTCCTGAATGGTATTTTGCTCAGAAAAT TGACTATCTAAGAGAAAAGGTTCACCCAGAGTTTGTTCGAGAACGACGTGCAATGAAGAG AATACGAAGAATTTAAGGTTCGCATAAACACAGTAGTTGCTAATTCATGCAAAGTTCCCG AGGGAGGATGGTCCCTACCAGAAGGAGCTCCATGGCATGGAAATAATGTTCGAGACCATG CCGGAATGGTCCAGGTCATCACTGGTAATGATTGTGTCATGGATGATGCTGGAAATAAGC TGCCTTGGTTGGTCTATGTTTCACGTGAGAAAAGGCCTGGACATGATCATCATAAAAAAG CCGGTGCCTTGAATGCATTGCTGCGAACTTCAGCAATTCTCTCCAACGCACCTTTTGTAC TGAATGTGGATTGTGACCACTATATGAACAATAGCAAAGCGCTACGGGAGGCAATGTGTT TTCTGATGGACCCAGTGTTGGGAGAGAAGATTTGTTATGTTCAATTTCCGCAGAGATTTG ATGGCATTGATCAACACGATAGATATTCAAACCACAATGTTGTGTTTTTTGATATTAACA TGAAAGGTCTTGATGGGATCCAAGGACCAATATATGTTGGGACTGGTTGTGTTTTCAGAA GACATGCTTTGTATGGTTATGATGCCCCAACTGCAACAAAACCTCCTAGCAAGACATGTA ACTGCTGGCCAAAGTCATGCTGCTTGTGTTGTGGATCGAAAAGAAAATGTTCCAAAGCTA AGAAAAAACAAGAACACCAAAAGAAAGTGAAATGCAGGAATGCGTCCAAGCAAGTGCATG CTCTCGAAGTAGCTGGAAGAGAAACTGCACCTCCTGTGCCTCGAGAAAAGTTTGAGAAGA GATTTGGGCAGTCAGATGCATTTTTGGCTTCAACATTGCAAGATAATGGTGAAGGTTGTC ACTTCGACATGCTCAAAAGCCTTGATGATTGCATCCATGTGCTAAGTTGTGGGTACGAGA ATAAGACACAATGGGGGAAAGAGGTTGGTTGGATTTATGGATCTGTCACTGAGGATATCC TCACGGGCTTCAAGATGCACTGCCATGGTTGGCGATCTGTGTACTGCATGCCCAAGAGAC CAGCATTCAAAGGATCTGCACCTATCAATCTCACTGATCGTCTCCATCAAGTTCTAAGAT GGGCACTTGGCTCTGTGGAGATCTTCCTTAGCAAGCACTGCCCAATATGGTACGGGTATC GATGTGGTCTGAAACCATTGGAGAGGTTGTCATATATCAACTGTGTCATCTATCCATGGA CATCAATCCCGCTGCTAATCTACTGCGCCCTGCCAGCGTTTTGCCTGTTATCAGGGAAGT TTATGGTGCCTGAGATGAATGTCTATTCGAGCATATTGTTCATAGCTCTATTTGTCTCCA TAGCAGCTACCAGCATCCTAGAGATGCAGTGGGGAGGAGTCGGAATCGACGATTGGTGGA GAAACGAGCAGTTCTGGGTCATTGGCGGTGTCTCCTCGCACCTCTTTGCGCTGTGCCAGG GGCTCCTCAAGGTTCTCGGTGGCGTGAGTACCAAGTTCAGGGTGACTCTGAAGGGAGGCG GCACGGACGAGTTCTCAGAGCTGTACGAGTTCAAGTGGACCTGGCTACTGGTCCCTCCGA TGACACTGCTCCTGCTAAACGTCGTCGCGGTCTTGGCCGGCGTGTCCAAGGCGGTGACGG ACGGGTACGAAGCCTGGGGCCCGCTGCTCGGCAAGCTGTTCTTCTCCTTCTGGGTCGTCC TCCACCTCCACCCGTTCCTCAAGGGCGTGATCGGCAGGCAGGACAGGGTGCCGACCGTTG TCGTTGTGCTGTCAATGCTACTGGCATCCATACTCTCTCTGTTGTGGGTCCGGGTGAGCC CCTTCGCCACCAAGTTCGATGGACCTGTTCTGGAGGTCTGTGGCTTGGATTGTGAGTGAG GGAGGTAGGAGAAGATACAGCTTCTTTGCTTAGGGAATAGGTTTTGAGTTACCCCAGTGC TAGAGTAGTGAGAGGGTTCTATTCTTTCGTTAGCTATTCAACGTTTTCTATCTGATTAGC GTAGGTTTTAGTGAAGCGGTGTTTTATGTTTATGAGCAGGAGGGAAATAGAGAATGGAGA AGATGGTAGTGCTGCTGCTGACTGTTGTAGATATTGAGACAGGCACAATAGAGAATAGAG TGACACTTGGTATGG