Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046658_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:100815624:100818428:1 gene:Zm00001d046658 gene_biotype:protein_coding transcript_biotype:protein_coding description:Intron maturase type II family protein
Sequence

ATGTCCATCCTAGCGTCCGGTCGCGCCCGCCTCCTCCGTGGACTCTCCAGCCACTGCACG
CAGCGGCCTCAACAGCAAGGATACTATGTCGCGTGCGTCCGGCGGTACAGGTCGCGACAC
ATGTCACTCGATGGAGTTGAGGACGCGGCGGAGCAAGCCGTCGAACCGCCGCCGGTGTCT
CTGGCGAAGAGCCTGGCTTCTCTCGCCGAGGAGGCCGCGGCCGTCCAGAGGCAGAGGAAG
CCCCTCACACGGATGGAGCGGAAGCGGTTAGCCGAGCTCCACATCAAGAAGAGGGTCAAG
GAGCAGTACCTCAACGGCAAGTTCTACCGCCTCATGGATAAGGTCGTGGCGAATGCTGAG
ACGCTGGAGGATGCATACGACATCGTGCGTCTGAATTCAAACGTTGATCTAGCGTCTTCA
AAGGATGATGTATGCTTTGCCACGCTGGCAGAGGAGCTGAGGAACGGGGCGTTTGATGTC
CGAGCTAATGCTTTCTCAGTGGTCGCGAAGAGAAAACGGGGACACCTTGTTCTTCCTAGG
CTGAACTTGAAAGTGGTTCAGGAAGCGATAAGAGTGGTGCTTGAGGTTGTCTACAGGCCT
CAATTCTCAAAGATATCACATGGTTGTCGCAGTGGGCGAGGATATCACTCAGTTTTCAGA
TTTATATCTGATGAAATCGGGATTCCAGATTGGTTCTTTACTGTCCCGTTGCACAAGGCG
GTTGATAGCAATGTGACCTCTAAGCTTATGTCGCTAATACAGGAGAAGATCGATGACGCC
CAGTTAGTTGCATTCATGCAAAATATGTTTGATGCCAAGGTGATCAATTTGGTATTTGGT
GGGTACCCCAAGGGTCATGGGCTGCCTCAAGAAGGAGTACTTGCACCAATCCTGATGAAC
ATATATCTTGACAGTTTTGACCACGAGATATTCAGGATTTGCTTGAAACATGAAGGCCTT
GGTTCAGAGGCAACAGATGTTTCAGAAGACCGTGGGTCAAATTTGCGTCGCTGGTTTCGG
AGCCAACTGAAGGGCAAGGATGAAAGTAGTGAAAATCAAACAGATTGTCTGATAAAGATA
AAGCTATATGCTTGTAGATATATGGATGAGATTTTTGTTGCAGTTTCTGGATCCAGAGAT
GTCGCGGAAGATATGAAATCTGAAATGGTTGCTTACTTAAACAAATCACTTTACTTGGAA
GTTGATGATAAAATTCATCTTGTGCCGATCAGAAGGAACCCACGAGGCTTACAGTTTGCT
GGTTTTGTGGTCAGAGTAGAAACGAAGGAAAATGCTAAACTGAAAGCTGTGCATAAGCTG
AAGCAGAAGATTGGTTTGTTTGCTTCTCAGAAGCAAGAGATTTGGGACGCTATGAATCTT
AGAGTAGGAAAGAAGTGGTTGGCATATGGATTGAGAAGAATAAAAGAGAGTGAGATCAAG
TCGCTTGGCCTTAGCACCCCTTTGTTGGATCACATTGCACAATTTAGGAAAGAGGGAATG
AAGACAGATCACTGGTTCAAAACATTGCTAAAGGTATGGATGCAGGATGTCAATGCCAAA
AATGAGCTAAATGAGGATGTTCTCTTATCAAAATACATTGCTGAGCCAGCACTTGCACAA
GACCTTAGGGATGCATTCTACAACTTTCAGAAGCAAGCTAAGGATTACATTTCATCAGAG
ACTGCTGCAACGGAAGCATTGTTGTCCGATTTGAAGAGTACCTGCACTGATGGCAGTGTC
ATAAAAATTCATGCACCTCTTAACTATATTCAGAAGTGCCTTCATCGCTATGGTATAATT
AATCTAGAAGGTTTCCCTAGGCATGTATCGGCCCTTGTCTTGCAAGATGATGAGTTAATA
GTAAGTTGGTTTGCAGGAATAATTCATCGTTGGATAAGATGGTTTTCTGAAGTTGACAAT
TTCAAGGAACTTCAGCTTATGTTTGTGGAATGTGTCAGAAAATCCTGCATCAGGACACTA
TCTGCGAAGTATAGGATGTATGAAAGGCTCACAGAAAAGCGGTTTGAACTTGATGATCAT
GGCATTCCAATGGTTGAGGATTTTGAGGCAATAATTAAACCTTTAGAATCTAGTTATTCT
GTGGCTTCTACTGATGAAGCTTTGGTGTATGGCATTTCTGCTAGCGGTGTAGTTGTGCTA
ACACTGTCAAGAGTTAGAGTCCCTACTCGACAATTTAACTGCTTTGTTATGGGCTGCCAA
TCTGCGTCACCAAGTATGTATGTGCTTCATGTGAAGGAGAAACAGCGTTTCCCTGGATGG
AGGACAGGTTTCTCGTCATCAATCGATGGGATTTTGGATGGTAAACGAATTGGACTGTGC
ACCAAGCATGTTAAAGATATATATCTGGGACACATCTCCCTTCAATCAGTCGATTTTGGT
TCCCTGATTAGATGA

Peptide Sequence

PEP ID

Zm00001d046658_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:100815624:100818428:1 gene:Zm00001d046658 transcript:Zm00001d046658_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Intron maturase type II family protein
Sequence

MSILASGRARLLRGLSSHCTQRPQQQGYYVACVRRYRSRHMSLDGVEDAAEQAVEPPPVS
LAKSLASLAEEAAAVQRQRKPLTRMERKRLAELHIKKRVKEQYLNGKFYRLMDKVVANAE
TLEDAYDIVRLNSNVDLASSKDDVCFATLAEELRNGAFDVRANAFSVVAKRKRGHLVLPR
LNLKVVQEAIRVVLEVVYRPQFSKISHGCRSGRGYHSVFRFISDEIGIPDWFFTVPLHKA
VDSNVTSKLMSLIQEKIDDAQLVAFMQNMFDAKVINLVFGGYPKGHGLPQEGVLAPILMN
IYLDSFDHEIFRICLKHEGLGSEATDVSEDRGSNLRRWFRSQLKGKDESSENQTDCLIKI
KLYACRYMDEIFVAVSGSRDVAEDMKSEMVAYLNKSLYLEVDDKIHLVPIRRNPRGLQFA
GFVVRVETKENAKLKAVHKLKQKIGLFASQKQEIWDAMNLRVGKKWLAYGLRRIKESEIK
SLGLSTPLLDHIAQFRKEGMKTDHWFKTLLKVWMQDVNAKNELNEDVLLSKYIAEPALAQ
DLRDAFYNFQKQAKDYISSETAATEALLSDLKSTCTDGSVIKIHAPLNYIQKCLHRYGII
NLEGFPRHVSALVLQDDELIVSWFAGIIHRWIRWFSEVDNFKELQLMFVECVRKSCIRTL
SAKYRMYERLTEKRFELDDHGIPMVEDFEAIIKPLESSYSVASTDEALVYGISASGVVVL
TLSRVRVPTRQFNCFVMGCQSASPSMYVLHVKEKQRFPGWRTGFSSSIDGILDGKRIGLC
TKHVKDIYLGHISLQSVDFGSLIR

Transcript Sequence

Transcript ID

Zm00001d046658_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:100815624:100818428:1 gene:Zm00001d046658 gene_biotype:protein_coding transcript_biotype:protein_coding description:Intron maturase type II family protein
Sequence

CCGCACGGACGATTCATCCCTGCGGACAACGATGGCGGCTTTGCTGCAGCGTCGCGCACA
CCACCAGCTCGACGGAATGCCCCACTAGACCAGGTCCAGGACGCCTGCTCAATGTCCATC
CTAGCGTCCGGTCGCGCCCGCCTCCTCCGTGGACTCTCCAGCCACTGCACGCAGCGGCCT
CAACAGCAAGGATACTATGTCGCGTGCGTCCGGCGGTACAGGTCGCGACACATGTCACTC
GATGGAGTTGAGGACGCGGCGGAGCAAGCCGTCGAACCGCCGCCGGTGTCTCTGGCGAAG
AGCCTGGCTTCTCTCGCCGAGGAGGCCGCGGCCGTCCAGAGGCAGAGGAAGCCCCTCACA
CGGATGGAGCGGAAGCGGTTAGCCGAGCTCCACATCAAGAAGAGGGTCAAGGAGCAGTAC
CTCAACGGCAAGTTCTACCGCCTCATGGATAAGGTCGTGGCGAATGCTGAGACGCTGGAG
GATGCATACGACATCGTGCGTCTGAATTCAAACGTTGATCTAGCGTCTTCAAAGGATGAT
GTATGCTTTGCCACGCTGGCAGAGGAGCTGAGGAACGGGGCGTTTGATGTCCGAGCTAAT
GCTTTCTCAGTGGTCGCGAAGAGAAAACGGGGACACCTTGTTCTTCCTAGGCTGAACTTG
AAAGTGGTTCAGGAAGCGATAAGAGTGGTGCTTGAGGTTGTCTACAGGCCTCAATTCTCA
AAGATATCACATGGTTGTCGCAGTGGGCGAGGATATCACTCAGTTTTCAGATTTATATCT
GATGAAATCGGGATTCCAGATTGGTTCTTTACTGTCCCGTTGCACAAGGCGGTTGATAGC
AATGTGACCTCTAAGCTTATGTCGCTAATACAGGAGAAGATCGATGACGCCCAGTTAGTT
GCATTCATGCAAAATATGTTTGATGCCAAGGTGATCAATTTGGTATTTGGTGGGTACCCC
AAGGGTCATGGGCTGCCTCAAGAAGGAGTACTTGCACCAATCCTGATGAACATATATCTT
GACAGTTTTGACCACGAGATATTCAGGATTTGCTTGAAACATGAAGGCCTTGGTTCAGAG
GCAACAGATGTTTCAGAAGACCGTGGGTCAAATTTGCGTCGCTGGTTTCGGAGCCAACTG
AAGGGCAAGGATGAAAGTAGTGAAAATCAAACAGATTGTCTGATAAAGATAAAGCTATAT
GCTTGTAGATATATGGATGAGATTTTTGTTGCAGTTTCTGGATCCAGAGATGTCGCGGAA
GATATGAAATCTGAAATGGTTGCTTACTTAAACAAATCACTTTACTTGGAAGTTGATGAT
AAAATTCATCTTGTGCCGATCAGAAGGAACCCACGAGGCTTACAGTTTGCTGGTTTTGTG
GTCAGAGTAGAAACGAAGGAAAATGCTAAACTGAAAGCTGTGCATAAGCTGAAGCAGAAG
ATTGGTTTGTTTGCTTCTCAGAAGCAAGAGATTTGGGACGCTATGAATCTTAGAGTAGGA
AAGAAGTGGTTGGCATATGGATTGAGAAGAATAAAAGAGAGTGAGATCAAGTCGCTTGGC
CTTAGCACCCCTTTGTTGGATCACATTGCACAATTTAGGAAAGAGGGAATGAAGACAGAT
CACTGGTTCAAAACATTGCTAAAGGTATGGATGCAGGATGTCAATGCCAAAAATGAGCTA
AATGAGGATGTTCTCTTATCAAAATACATTGCTGAGCCAGCACTTGCACAAGACCTTAGG
GATGCATTCTACAACTTTCAGAAGCAAGCTAAGGATTACATTTCATCAGAGACTGCTGCA
ACGGAAGCATTGTTGTCCGATTTGAAGAGTACCTGCACTGATGGCAGTGTCATAAAAATT
CATGCACCTCTTAACTATATTCAGAAGTGCCTTCATCGCTATGGTATAATTAATCTAGAA
GGTTTCCCTAGGCATGTATCGGCCCTTGTCTTGCAAGATGATGAGTTAATAGTAAGTTGG
TTTGCAGGAATAATTCATCGTTGGATAAGATGGTTTTCTGAAGTTGACAATTTCAAGGAA
CTTCAGCTTATGTTTGTGGAATGTGTCAGAAAATCCTGCATCAGGACACTATCTGCGAAG
TATAGGATGTATGAAAGGCTCACAGAAAAGCGGTTTGAACTTGATGATCATGGCATTCCA
ATGGTTGAGGATTTTGAGGCAATAATTAAACCTTTAGAATCTAGTTATTCTGTGGCTTCT
ACTGATGAAGCTTTGGTGTATGGCATTTCTGCTAGCGGTGTAGTTGTGCTAACACTGTCA
AGAGTTAGAGTCCCTACTCGACAATTTAACTGCTTTGTTATGGGCTGCCAATCTGCGTCA
CCAAGTATGTATGTGCTTCATGTGAAGGAGAAACAGCGTTTCCCTGGATGGAGGACAGGT
TTCTCGTCATCAATCGATGGGATTTTGGATGGTAAACGAATTGGACTGTGCACCAAGCAT
GTTAAAGATATATATCTGGGACACATCTCCCTTCAATCAGTCGATTTTGGTTCCCTGATT
AGATGACTCAATGATATGTTACCTGTGATTTTCTAATAATTGAAGGCCTTGAAAATGAGT
ACTGACTCACATGATAGTAGGTTCAGTAATTGTAAATCTAAACATGGTTACACATAGTTT
GATTTTGTAGACAGCTTGATTGATATGCTTGTGGACTGTTTCAAATAGAAATTACTCTAC
AACTTGAAGC