Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046601_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:9:98195683:98203766:1 gene:Zm00001d046601 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox (PX) domain-containing protein
Sequence	ATGGCAACGTCGGCGGCGGCGGGATCGCGCAGGAAGGCGCCGAGCCCTCCGAAGCACCGC CACGACGGTACCTCGCCGCTGCCTCTCGGCATGGACTGGAGCCCTCCCCCGAAGAGATGG GAGGGAAGGAACACCATATGGCCACACAACCCTCAAACAGGTTGGAGTTACTGTGTGATG ATGCCTTCTTGGATCACCCAAACACCTGAAACTGGTGTCACAGCCGATAGCTTTTTGAAA TCTGTCGTTTTTTACAGGATACATGTTGGTATACAATCTTCAGAAGGCTTTAGCTCTATC CATGGAATCCTCAGAAGGTTTAGTGACTTTCTGAAGCTATCTTCTGATCTTAAGAGCGCG TTTCCCAGAAAAGATGTCCCATCGGCTCCTCCGAAGCATGCTTTCTTAAGAATAAATTCA AGCAGGTTGCTTCTAGAAGAGAGAAGGCATGCATTGGAGGAGTGGATGCAGAAGTTACTT TCTGACATTGACTTGTCAAGAAGTGCTCCTGTTGCTGCTTTTCTTGAGCTTGAAGCTGCT GCGCGTTCATATTTCCAAGAACGGAATGGGCGTCCTTCTGAAGTAGGTCCTTCTGCAAAA AGCAGTACTAAATCTTCCTCACATTCTGATGGACCTGCTTCCGGTTCTCTTGCTGAGTCC AATGAAATAAATCAAGGTCTTACTCGCGGTAGCAGTCTGACAGGAGCAACTGGTAATGGT GTGCTTGGAGAAGCTATCTTAGATCAGTCTGATGAGCATGTTAGCAGTGCCTTGAATCAC AGGAAAGGGAACCTTGTATTGGAACATGATGGTAGAAATGGTTCGGTAGCGTCTTATAGG GGAGTTCTTTCAGAAGAGGACCGTGATTCTTATCCCGGCCATGCTCGGAAGGACTCTGCT GAAAGTATTGGGAGTGATTTGAGTTCTTTAAGAGGAAGTGAATTATCTGTTCCAGGGGCT AGTAATTCCCTTTGGGATGGTGCTGTGGTGGATGGACATGTTAGTCAAACAGAACATCTT ACTGGTTTAGATATGCATCTTTTGTATGATATGGATGCGCAAGTCATCCTTCCAAATGAT AAAAAACAGAAGTTGACTAGACTTTTGATCACAATGCAACGAAGAATAGGGACAGCAAAA ACTGATATGGAGGATCTCATAGCACGATTAAATCAGGAAGGAGCTGTTAAAGAATATCTT ACTACAAAGGTTAAAGATTTAGAGGTTGAATTGGAAGCCACAAAGCAAAAAGGTAGAGAG ACACTGCAACAAGCTATCCTGGCTGAAAGAGAGAGGATTACCCAGATGCAGTGGGATATG GATGAGCTCCGTAGGAAGTACTCTGAGATGGAGTCAAACCTGAAGACCGAACATAATGAG AAAACTCGTGCGGAGTCAGAAAGAACAACTGCTAGTGGTGAAAATGAAACATTACTTGAA GAATTAGAAATCAAACAAAAAGAAGTTGAGAGTTTGAAACAGCAACTTGTAGAAGCTGAG GCAAAGTCCAAAGCTGATAAGAAAGTTCTTGTCAAAGAGGTCAAGTCTCTTAGAAACTCC CAAACTGAGATGAAGAAAGTGTTGAATCAGTATCTTGAGGAGAAGACTGATTTAGAGAGA GTTATTAATAGAGATAAACAGAGATCAGCACGTACAAAGTTATCCCGAGTAAAAATTCTT CATGAGTGTCGACTGCTGCGGGAGCGGCTACAAGACTGCAGTGCTAAATTTCTAGCAGAA GAACAAGACAACTTTACTATTGATCCATCATCCTTGCCTGATGCATTAGATCTTCTAGCA ACATCAGACAATAGAATACGCCTACTCGTTGCTGAGGTAAACTTGAAATGTTATGGTAAA TTAATACTCCCTCCGTCCCAATTTATAATTCTTTTGACTTTTTTTAATCAAGTTTGA

Peptide Sequence

PEP ID	Zm00001d046601_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:9:98195683:98203766:1 gene:Zm00001d046601 transcript:Zm00001d046601_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox (PX) domain-containing protein
Sequence	MATSAAAGSRRKAPSPPKHRHDGTSPLPLGMDWSPPPKRWEGRNTIWPHNPQTGWSYCVM MPSWITQTPETGVTADSFLKSVVFYRIHVGIQSSEGFSSIHGILRRFSDFLKLSSDLKSA FPRKDVPSAPPKHAFLRINSSRLLLEERRHALEEWMQKLLSDIDLSRSAPVAAFLELEAA ARSYFQERNGRPSEVGPSAKSSTKSSSHSDGPASGSLAESNEINQGLTRGSSLTGATGNG VLGEAILDQSDEHVSSALNHRKGNLVLEHDGRNGSVASYRGVLSEEDRDSYPGHARKDSA ESIGSDLSSLRGSELSVPGASNSLWDGAVVDGHVSQTEHLTGLDMHLLYDMDAQVILPND KKQKLTRLLITMQRRIGTAKTDMEDLIARLNQEGAVKEYLTTKVKDLEVELEATKQKGRE TLQQAILAERERITQMQWDMDELRRKYSEMESNLKTEHNEKTRAESERTTASGENETLLE ELEIKQKEVESLKQQLVEAEAKSKADKKVLVKEVKSLRNSQTEMKKVLNQYLEEKTDLER VINRDKQRSARTKLSRVKILHECRLLRERLQDCSAKFLAEEQDNFTIDPSSLPDALDLLA TSDNRIRLLVAEVNLKCYGKLILPPSQFIILLTFFNQV

Transcript Sequence

Transcript ID	Zm00001d046601_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:98195683:98203766:1 gene:Zm00001d046601 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox (PX) domain-containing protein
Sequence	GGGAGCGTCCGCCCGACCGCCACCGCGTCCGCCTCAGCTCCCCTCGCTTCCCTCTAATTT CCAGCCCAGTAGTAGGGAGACTAGAATCGTCGGCGCGACGCCTTGGCAGATTCGTCCGCC CCGATCCCACCACCACCGTGCCCCGCGGGTGACGTCGGACCGGCGGCGATGGCAACGTCG GCGGCGGCGGGATCGCGCAGGAAGGCGCCGAGCCCTCCGAAGCACCGCCACGACGGTACC TCGCCGCTGCCTCTCGGCATGGACTGGAGCCCTCCCCCGAAGAGATGGGAGGGAAGGAAC ACCATATGGCCACACAACCCTCAAACAGGTTGGAGTTACTGTGTGATGATGCCTTCTTGG ATCACCCAAACACCTGAAACTGGTGTCACAGCCGATAGCTTTTTGAAATCTGTCGTTTTT TACAGGATACATGTTGGTATACAATCTTCAGAAGGCTTTAGCTCTATCCATGGAATCCTC AGAAGGTTTAGTGACTTTCTGAAGCTATCTTCTGATCTTAAGAGCGCGTTTCCCAGAAAA GATGTCCCATCGGCTCCTCCGAAGCATGCTTTCTTAAGAATAAATTCAAGCAGGTTGCTT CTAGAAGAGAGAAGGCATGCATTGGAGGAGTGGATGCAGAAGTTACTTTCTGACATTGAC TTGTCAAGAAGTGCTCCTGTTGCTGCTTTTCTTGAGCTTGAAGCTGCTGCGCGTTCATAT TTCCAAGAACGGAATGGGCGTCCTTCTGAAGTAGGTCCTTCTGCAAAAAGCAGTACTAAA TCTTCCTCACATTCTGATGGACCTGCTTCCGGTTCTCTTGCTGAGTCCAATGAAATAAAT CAAGGTCTTACTCGCGGTAGCAGTCTGACAGGAGCAACTGGTAATGGTGTGCTTGGAGAA GCTATCTTAGATCAGTCTGATGAGCATGTTAGCAGTGCCTTGAATCACAGGAAAGGGAAC CTTGTATTGGAACATGATGGTAGAAATGGTTCGGTAGCGTCTTATAGGGGAGTTCTTTCA GAAGAGGACCGTGATTCTTATCCCGGCCATGCTCGGAAGGACTCTGCTGAAAGTATTGGG AGTGATTTGAGTTCTTTAAGAGGAAGTGAATTATCTGTTCCAGGGGCTAGTAATTCCCTT TGGGATGGTGCTGTGGTGGATGGACATGTTAGTCAAACAGAACATCTTACTGGTTTAGAT ATGCATCTTTTGTATGATATGGATGCGCAAGTCATCCTTCCAAATGATAAAAAACAGAAG TTGACTAGACTTTTGATCACAATGCAACGAAGAATAGGGACAGCAAAAACTGATATGGAG GATCTCATAGCACGATTAAATCAGGAAGGAGCTGTTAAAGAATATCTTACTACAAAGGTT AAAGATTTAGAGGTTGAATTGGAAGCCACAAAGCAAAAAGGTAGAGAGACACTGCAACAA GCTATCCTGGCTGAAAGAGAGAGGATTACCCAGATGCAGTGGGATATGGATGAGCTCCGT AGGAAGTACTCTGAGATGGAGTCAAACCTGAAGACCGAACATAATGAGAAAACTCGTGCG GAGTCAGAAAGAACAACTGCTAGTGGTGAAAATGAAACATTACTTGAAGAATTAGAAATC AAACAAAAAGAAGTTGAGAGTTTGAAACAGCAACTTGTAGAAGCTGAGGCAAAGTCCAAA GCTGATAAGAAAGTTCTTGTCAAAGAGGTCAAGTCTCTTAGAAACTCCCAAACTGAGATG AAGAAAGTGTTGAATCAGTATCTTGAGGAGAAGACTGATTTAGAGAGAGTTATTAATAGA GATAAACAGAGATCAGCACGTACAAAGTTATCCCGAGTAAAAATTCTTCATGAGTGTCGA CTGCTGCGGGAGCGGCTACAAGACTGCAGTGCTAAATTTCTAGCAGAAGAACAAGACAAC TTTACTATTGATCCATCATCCTTGCCTGATGCATTAGATCTTCTAGCAACATCAGACAAT AGAATACGCCTACTCGTTGCTGAGGTAAACTTGAAATGTTATGGTAAATTAATACTCCCT CCGTCCCAATTTATAATTCTTTTGACTTTTTTTAATCAAGTTTGACTGGCTTGTCTTATT CAATTTTTTTTTTGCGAAAAAATGAAAAATTCAAAGCCATACTTAAAGTATATCATATGC TAAACGGTATCGCATTAAAAATTAATAATAATTATGATTTTTTTGAATAAGACGAGCCAG TCGAACTTAAAGTAAAAAAGTCAAAAGAATTATAAATTGGAACAGAGGGAGTATCTTCTT TTATGTTCTTCAAGAGCAGCCAAAGTTACACGGTACAACTCTAATGAACTTTGAGTTTGA GCAATTGAGTTATTTTGGAAATAAGTGCTACTTTCATTTCTTGGCAATGCAAAAAAGAAG TGTCCTATGGATAACGTAGAAAGCTATGCAAGAACATGGGGTTTGTGATGGTTGCTTATC CTAACACAGAATACTACCCTCCTGATGTTAATATTTGATGCTCCAACAGCATTTTAATAC CTGCAGCTAGCTCATTATCCTAGTTTGGAAGATCAACTATTCCTGATTTGGGTTGGGGGG GGGGTGTATTATTTAGTTCAGTTATTGTCGATTGGACGATCACTCGAATTTCCCTACTTC TGCACTAGAAGCCCCTGAACTCTTCTCACTTTACCTTTTTTTTTATCTTGGATCTGGATC TGGAGCTGGAGCAGCCTTTGTAATATCATTATTTCAGCATTCACTTCTTGAACCTAGACT GTTTTTATTGTTGTAGACTGGTTGTAGCTGGGAGAAAACTACCCTATCAAGGTCCCAACT TTAGAATTATTAAGGAAAATGACAAGTTTGCGGCAGTTAGTTCTTAAACGTAGACTGTTT TTAGTGTGAACTAGCTGTAGCTTGCACATTGTGTTCGTAGCTCCTGTTTAGAATTATTGC CTCCTATCAGTCGCTTCTTTGTAGTAGTGACAGATCTTTTTTCTTTGGGTTCAGGTAGAG TTTGGAGTTTGAGCATCATATCATGTTACCTTGATAGTTACAGTTCATCATATGCTTTGA TTTAGATAGAGAATATTGTTCACACTGGAATGCAATTTTCATGGATGTACACTCCATTTC AGTTTTAAATATACTTTCTGTTAATTCTGCTCCTTCTAAATCTCTACTAAACCTATGCTC TGCATTGCCCTCTCCAGGCTCAACTTCTAGCACGAGATGATGAACAAGGCTCTTCTGATG GTGGCGACGATTCTGATAGTAGATCCTCATTAACTATGAGCAGTGAAGATGCAAAAGTTA CCGATGAAGATACTACTAAAATGCTTTCTGATCTGCTCATTGACAATGCGCAGCTGAGAC TACGCCTCAATGCTGTCATCCGCAATGCTGTAAATACTTCCGTGAAGCCAGAGAAAGAAG GTAGTGGCGAGGTTCTCCCCAAAAAGACAGTCCTTAACTGGTTGTTGGACAGATGAGAGA ACCACCAATATATATTTATGTGGATTAGTTCTTCAAACTTACGCGGCTTGACCAAAATTA TATGATGAG