Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046600_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:9:98188130:98192465:1 gene:Zm00001d046600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type

Sequence

ATGGTGGGGAAGAACTGTTTCGCGATCGCCAGCGACCGGCGGCTGGGCGTGCAGCTTCAG
ACCATCGCGACGGACTTCCAGCGGGTGTTCAAGGTCCACGACAAGCTTTACATCGGCCTC
TCTGGGCTCGCCACTGACGCCCAGACGCTGTACCAGCGGTTGGTGTTCAGGCACAAGCTG
TATCAGCTGCGGGAGGAGAGGGACATGAAGCCCGAGACCTTTGCCAGCCTTGTCTCTGCG
CTCCTCTACGAGAAGAGATTCGGGCCATATTTTTGCCAGCCAGTCATTGCTGGACTTGGA
GATGACAACGTACCATTTATTTGTACTATGGACTGCTTAGGTGCAAAGGAGCTGGCCAAG
GATTTTGTTGTATCTGGGACAGCATCAGAATCTTTGTATGGTGCTTGTGAGTCCATGTAC
AAGCCGAACATGGAACCTGATGAACTCTTCGAAACTGTATCCCAAGCTCTGAATTCATCA
ATAGACCGTGACTGCCTTAGTGGGTGGGGTGGCTATGTTCTGATTGTGACACCGACTGAA
GTGAGGGAGCATGTGATTAAGAGCAGGATGGACTAA

Peptide Sequence

PEP ID

Zm00001d046600_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:9:98188130:98192465:1 gene:Zm00001d046600 transcript:Zm00001d046600_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type

Sequence

MVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDAQTLYQRLVFRHKL
YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFICTMDCLGAKELAK
DFVVSGTASESLYGACESMYKPNMEPDELFETVSQALNSSIDRDCLSGWGGYVLIVTPTE
VREHVIKSRMD

Transcript Sequence

Transcript ID

Zm00001d046600_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:98188130:98192465:1 gene:Zm00001d046600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type

Sequence

ATGTCGGTGAGTCCCCCGATTCCCCGCTGGCTCCCGTGCCGTCCTCCCCTCGCCCCGGAT
CTCGAATTCCTTACCGTTTCGCCCCCCCTACCCATCGCAGATCTTCGAGTATAATGGGTC
CGCCGTGGTGGCGATGGTGGGGAAGAACTGTTTCGCGATCGCCAGCGACCGGCGGCTGGG
CGTGCAGCTTCAGACCATCGCGACGGACTTCCAGCGGGTGTTCAAGGTCCACGACAAGCT
TTACATCGGCCTCTCTGGGCTCGCCACTGACGCCCAGACGCTGTACCAGCGGTTGGTGTT
CAGGCACAAGCTGTATCAGCTGCGGGAGGAGAGGGACATGAAGCCCGAGACCTTTGCCAG
CCTTGTCTCTGCGCTCCTCTACGAGAAGAGATTCGGGCCATATTTTTGCCAGCCAGTCAT
TGCTGGACTTGGAGATGACAACGTACCATTTATTTGTACTATGGACTGCTTAGGTGCAAA
GGAGCTGGCCAAGGATTTTGTTGTATCTGGGACAGCATCAGAATCTTTGTATGGTGCTTG
TGAGTCCATGTACAAGCCGAACATGGAACCTGATGAACTCTTCGAAACTGTATCCCAAGC
TCTGAATTCATCAATAGACCGTGACTGCCTTAGTGGGTGGGGTGGCTATGTTCTGATTGT
GACACCGACTGAAGTGAGGGAGCATGTGATTAAGAGCAGGATGGACTAAATCATGGCCAC
TATCACTATAATTCTTAGCTGGTTTCCAATGCTTAGACCAATGTTGTGTTTGGATTCTGA
AGTAACATTGTATCATCACAGCTGGTATGAGAATGAACGGTTGTTTTATT