Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046581_T024
CDS Infomation	cds chromosome:B73_RefGen_v4:9:96875420:96896676:-1 gene:Zm00001d046581 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucine--tRNA ligase cytoplasmic
Sequence	ATGGACGACGTGTGCGAGGGGAAGGACTTCTCCTTCCCGGAGCAGGAGGAGGGGGTGATC GAGCTGTGGGCGAAGCTCGACGCCTTCCACGAGCAGCTCCGGCGCACGGAGGGCGGCGAG GAGTTCGTATTCTACGACGGTCCCCCCTTCGCCACGGGCCTGCCCCATTACGGCCACATA CTCGCCGGTACCATCAAGGACGTGGTCACCCGGCACCAGTCGATGCGAGGCCGCCACGTC TCGCGACGGTTCGGATGGGACTGTCACGGACTCCCCGTCGAGTTCGAGATCGATAAGGCG CTCGGCATCACCAACCGGCAGCAGGTGTTCGACCTCGGCATCGGCAAGTACAACGAGACG TGCCGCAGCATCGTCACCAAGTACGTCTCCGAGTGGGAGGCCATGGTTACACGCACGGGG AGGTGGATTGACTTCAAGAACGACTACAAAACCATGGACCTCAACTTCATGGAGAGCGTC TGGTGGGTGTTTGCCCAGCTATGGGAGAAGGACCTCGTCTATAGGGGTTTCAAGGTCATG CCTTACAGCACAGGATGCAAAACTGCACTGTCAAACTTTGAGGCAGCACTGGACTATAGG ACTGTTCCTGACCCAGCGGTGATGGTATCCTTCCCTATTGTTGGCGATGCGGACAATGCA GCTCTTGTTGCATGGACTACAACACCCTGGACACTTCCAAGTAACCTAGCGCTGTGTGTC AATGCCAATCTTACATATGCAAAGGTTAAAGACAAATCAAATGGAGCAGTATATGTTATT GCAGAATCCAGGCTTGGGCAGTTACCAGTTAAGGCCAAAGCTTCAGGAAAGAAGCAGGCA CCTTCAAAGGGAAGCAATATTGAAGCTGTTCAGGATGGTTTGGACAAGGAATCATATGAG CTGTTGTCAAAGATTCCTGGGGTATCCTTGGTTGGCTTAAAATATACTCCTCTATTTGAC TTTTTCATTGAACTTCAAGGGACTGCCTTTAGAGTGATTGCGGATAACTATGTCACGGAT GATAGTGGAACGGGTGTTGTTCATTGTGCTCCTGCTTTTGGTGAAGACGACCATCGTGTT TGCCTTGCTGCTGGGATATTTGAGACTGCTGGACTTGTTGTTGCTGTTGATGACGACGGA TGTTTTATTGAAAAAATATCTGATTTTAAAGGGCGATATGTCAAAGAAGCCGACAAGGAT ATCATCAATGCTGTTAAGGATAAAGGAAGACTCATTAGTAAAGGGAGTATTGAGCACTCT TATCCATTTTGTTGGCGATCGGGCACTCCTCTTATTTATCGGGCTGTTCCAAGCTGGTTT GTCAAGGTTGAGAAGATTAAAGACCAGTTGCTGGAATGTAACAAGGAGACTTACTGGGTG CCTGACTATGTTAAGGAAAAAAGATTTCACAACTGGCTTGAAGGTGCTCGTGATTGGGCT GTTAGCAGAAGTAGATTCTGGGGTACTCCACTTCCACTGTGGATAAGTCAAGATGGTGAA GAAATTGTTGTTATGGATTCTATAGAGAAGCTTGAAAAATTATCTGGAGTCAAGGTCACT GATCTTCACCGACACTATGTTGATGATATTACAATTCCCTCTAAGAGAGGACCTGAGTTT GGGGTGCTCAAACGTGTTGATGATGTTTTCGACTGCTGGTTCGAGAGTGGGTCAATGCCA TATGCCTACATTCACTATCCATTTGAGAATCGGGAACTATTTGAAAAGAACTTTCCTGGC AATTTTGTGGCAGAGGGTTTAGATCAAACCCGTGGATGGTTCTATACTCTGATGGTTCTC TCAACAGCACTGTTTGGGAAGCCTGCATTTAAGAATCTTATATGCAATGGGCTTGTCTTG GCTGAGGATGGTAAGAAAATGAGCAAGAGTAAAAAGAACTATCCTCCACCCAAGGATCTC ATTGATGAGTTTGGAGCGGATGCTCTGCGACTATATTTGGTAAACTCCCCAGTTGTACGT GCAGAGTCTCTACGATTCAAACGTACTGGTGTCTTTGCTGTTGTGAAAGATGTCTTCCTC CCATGGTATAACGCATATAGATTTTTTGTCCAAAATGCAAAGAGACTGGAAGTTGAGGGT CTTGCCTCATTTTCTCCGATGGAACAAGTGGTACTTCTGAAGTCATCCAATGTGTTGGAT CACTGGATAAACTCTGCAACTGAAAGTCTAGTTAGCTTTGTTCACCAGGAGATGGATGCA TATCGGCTTTACACGGTTGTGCCGTATTTGGTAAAATACATTGACTATCTTACTAACATA TATGTGCGTTTGAACCGCAAACGGTTCAAAGGGCGTACTGGAGAAGAAGACTGCAGAATT TCTCTTTCAACACTCTACCATGTTCTTGTAACAACTTGCGTGGTGATGGCTCCATTTACA CCATTCTTTACTGAAGTTCTTTATCAAAATTTGCGGAAGGTGTCAAGTAATTCTGAGGAG AGCATCCACTTTTGCAAGTTCCCTTCCACAACTGGCGAGGGAAATGGTGGTTGTGCATCC AGACAATGA

Peptide Sequence

PEP ID	Zm00001d046581_P024
PEP Infomation	pep chromosome:B73_RefGen_v4:9:96875420:96896676:-1 gene:Zm00001d046581 transcript:Zm00001d046581_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucine--tRNA ligase cytoplasmic
Sequence	MDDVCEGKDFSFPEQEEGVIELWAKLDAFHEQLRRTEGGEEFVFYDGPPFATGLPHYGHI LAGTIKDVVTRHQSMRGRHVSRRFGWDCHGLPVEFEIDKALGITNRQQVFDLGIGKYNET CRSIVTKYVSEWEAMVTRTGRWIDFKNDYKTMDLNFMESVWWVFAQLWEKDLVYRGFKVM PYSTGCKTALSNFEAALDYRTVPDPAVMVSFPIVGDADNAALVAWTTTPWTLPSNLALCV NANLTYAKVKDKSNGAVYVIAESRLGQLPVKAKASGKKQAPSKGSNIEAVQDGLDKESYE LLSKIPGVSLVGLKYTPLFDFFIELQGTAFRVIADNYVTDDSGTGVVHCAPAFGEDDHRV CLAAGIFETAGLVVAVDDDGCFIEKISDFKGRYVKEADKDIINAVKDKGRLISKGSIEHS YPFCWRSGTPLIYRAVPSWFVKVEKIKDQLLECNKETYWVPDYVKEKRFHNWLEGARDWA VSRSRFWGTPLPLWISQDGEEIVVMDSIEKLEKLSGVKVTDLHRHYVDDITIPSKRGPEF GVLKRVDDVFDCWFESGSMPYAYIHYPFENRELFEKNFPGNFVAEGLDQTRGWFYTLMVL STALFGKPAFKNLICNGLVLAEDGKKMSKSKKNYPPPKDLIDEFGADALRLYLVNSPVVR AESLRFKRTGVFAVVKDVFLPWYNAYRFFVQNAKRLEVEGLASFSPMEQVVLLKSSNVLD HWINSATESLVSFVHQEMDAYRLYTVVPYLVKYIDYLTNIYVRLNRKRFKGRTGEEDCRI SLSTLYHVLVTTCVVMAPFTPFFTEVLYQNLRKVSSNSEESIHFCKFPSTTGEGNGGCAS RQ

Transcript Sequence

Transcript ID	Zm00001d046581_T024
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:96875420:96896676:-1 gene:Zm00001d046581 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucine--tRNA ligase cytoplasmic
Sequence	CCCCTTCCAAGCGAATCCCATTCCCTACCTTTCGCCGCCGCCTACGCACCATCGCTCGAA ACCCTAGCCCCATTCCCCGTCTCGCTCGGAATCCCAGCTACCTCCAGCGCCGCCGCGACT GCAGGATAGGAGGCCATGGACGACGTGTGCGAGGGGAAGGACTTCTCCTTCCCGGAGCAG GAGGAGGGGGTGATCGAGCTGTGGGCGAAGCTCGACGCCTTCCACGAGCAGCTCCGGCGC ACGGAGGGCGGCGAGGAGTTCGTATTCTACGACGGTCCCCCCTTCGCCACGGGCCTGCCC CATTACGGCCACATACTCGCCGGTACCATCAAGGACGTGGTCACCCGGCACCAGTCGATG CGAGGCCGCCACGTCTCGCGACGGTTCGGATGGGACTGTCACGGACTCCCCGTCGAGTTC GAGATCGATAAGGCGCTCGGCATCACCAACCGGCAGCAGGTGTTCGACCTCGGCATCGGC AAGTACAACGAGACGTGCCGCAGCATCGTCACCAAGTACGTCTCCGAGTGGGAGGCCATG GTTACACGCACGGGGAGGTGGATTGACTTCAAGAACGACTACAAAACCATGGACCTCAAC TTCATGGAGAGCGTCTGGTGGGTGTTTGCCCAGCTATGGGAGAAGGACCTCGTCTATAGG GGTTTCAAGGTCATGCCTTACAGCACAGGATGCAAAACTGCACTGTCAAACTTTGAGGCA GCACTGGACTATAGGACTGTTCCTGACCCAGCGGTGATGGTATCCTTCCCTATTGTTGGC GATGCGGACAATGCAGCTCTTGTTGCATGGACTACAACACCCTGGACACTTCCAAGTAAC CTAGCGCTGTGTGTCAATGCCAATCTTACATATGCAAAGGTTAAAGACAAATCAAATGGA GCAGTATATGTTATTGCAGAATCCAGGCTTGGGCAGTTACCAGTTAAGGCCAAAGCTTCA GGAAAGAAGCAGGCACCTTCAAAGGGAAGCAATATTGAAGCTGTTCAGGATGGTTTGGAC AAGGAATCATATGAGCTGTTGTCAAAGATTCCTGGGGTATCCTTGGTTGGCTTAAAATAT ACTCCTCTATTTGACTTTTTCATTGAACTTCAAGGGACTGCCTTTAGAGTGATTGCGGAT AACTATGTCACGGATGATAGTGGAACGGGTGTTGTTCATTGTGCTCCTGCTTTTGGTGAA GACGACCATCGTGTTTGCCTTGCTGCTGGGATATTTGAGACTGCTGGACTTGTTGTTGCT GTTGATGACGACGGATGTTTTATTGAAAAAATATCTGATTTTAAAGGGCGATATGTCAAA GAAGCCGACAAGGATATCATCAATGCTGTTAAGGATAAAGGAAGACTCATTAGTAAAGGG AGTATTGAGCACTCTTATCCATTTTGTTGGCGATCGGGCACTCCTCTTATTTATCGGGCT GTTCCAAGCTGGTTTGTCAAGGTTGAGAAGATTAAAGACCAGTTGCTGGAATGTAACAAG GAGACTTACTGGGTGCCTGACTATGTTAAGGAAAAAAGATTTCACAACTGGCTTGAAGGT GCTCGTGATTGGGCTGTTAGCAGAAGTAGATTCTGGGGTACTCCACTTCCACTGTGGATA AGTCAAGATGGTGAAGAAATTGTTGTTATGGATTCTATAGAGAAGCTTGAAAAATTATCT GGAGTCAAGGTCACTGATCTTCACCGACACTATGTTGATGATATTACAATTCCCTCTAAG AGAGGACCTGAGTTTGGGGTGCTCAAACGTGTTGATGATGTTTTCGACTGCTGGTTCGAG AGTGGGTCAATGCCATATGCCTACATTCACTATCCATTTGAGAATCGGGAACTATTTGAA AAGAACTTTCCTGGCAATTTTGTGGCAGAGGGTTTAGATCAAACCCGTGGATGGTTCTAT ACTCTGATGGTTCTCTCAACAGCACTGTTTGGGAAGCCTGCATTTAAGAATCTTATATGC AATGGGCTTGTCTTGGCTGAGGATGGTAAGAAAATGAGCAAGAGTAAAAAGAACTATCCT CCACCCAAGGATCTCATTGATGAGTTTGGAGCGGATGCTCTGCGACTATATTTGGTAAAC TCCCCAGTTGTACGTGCAGAGTCTCTACGATTCAAACGTACTGGTGTCTTTGCTGTTGTG AAAGATGTCTTCCTCCCATGGTATAACGCATATAGATTTTTTGTCCAAAATGCAAAGAGA CTGGAAGTTGAGGGTCTTGCCTCATTTTCTCCGATGGAACAAGTGGTACTTCTGAAGTCA TCCAATGTGTTGGATCACTGGATAAACTCTGCAACTGAAAGTCTAGTTAGCTTTGTTCAC CAGGAGATGGATGCATATCGGCTTTACACGGTTGTGCCGTATTTGGTAAAATACATTGAC TATCTTACTAACATATATGTGCGTTTGAACCGCAAACGGTTCAAAGGGCGTACTGGAGAA GAAGACTGCAGAATTTCTCTTTCAACACTCTACCATGTTCTTGTAACAACTTGCGTGGTG ATGGCTCCATTTACACCATTCTTTACTGAAGTTCTTTATCAAAATTTGCGGAAGGTGTCA AGTAATTCTGAGGAGAGCATCCACTTTTGCAAGTTCCCTTCCACAACTGGCGAGGGAAAT GGTGGTTGTGCATCCAGACAATGACTTCCTTGAAGACATCACTGGCAAACTAAAGGAGGT TTGTTTATTATTAGAGTGAAACCTGTAGTCGCTGAGCTTGTCTCCCATTCTGAAGTTATG GAGCTGTTTTGCGGCCACCAATCAGACACATCCATTTCAAGTTTTTCTTAGTTTTCACTA AAAATTTGGTTCATCATTGGTGGATGCTGACTACATTTACTTCATTCCATGTAGTATGTC ATGGAGGAAATCAATGTTAAGAATGTCACTCCATGTAATGACCCCTTGATGTATGCTTCT CTGCGAGCCGAGCCTAATTTCAGCGTGCTAGGAAAAAGACTTGGAAAAGACATGGGAAAA GTATCAAATGTGGTGAAGAAGATGACTCAGGAGCAGATCTTAGCATTTGAAAAAAGTGGA GAGGTTTCATTCTTCGGCCATTGCTTGAAGCTAGATGATATCAAGGTTGTCCGACAATTC AAGCGTCCTGAAAATGTGTCAGAGAAGGAGATTGATGCTGCAGGAGATGGTGATGTTTTA GTCATTTTGGATCTACGAACCGACCAGTCATTGTTTGAAGCTGGAGTGGCTCGAGAGGTT GTGAACAGGATCCAGAAATTACGAAAGACTGCTCAGCTTGAACCTGCTGATCCAGTTGAT GTGTATTACGAATCTGTGGGCAATGACAAAAACACTCTGGAAGAGATATTGAAGTCACAG GATCAGTATATTAGAGACGCACTTGGCTCACCAATCGTTCCAAAGGAAATGGCACCAACA GATGTCGTAGTACTTGGCGAGGAATCGCACAACGTACATGACATGTCATTTGTCATATGC ATCGCAAGGTCCACCCCGATTATTTCACCAGATCTTCTTTCTCATGCCTCAGGCAACAGC AATCATGTCGAGGCGTTGAGAGTATATCTTCTGTCAAAATCTCTATCCAGATTGAAGAAC CAGTTCCAAAGTGGAAATGGCGTGATTACGGTCGACTGCATCGAAGGTTATCCACTAATC AGGTTACAGCTAGGAAAGCATGTTTTTCTAAGTGCAGGGGATTTTTATCTGGCTAGTCGA TCCTAATTTTTGTGTGCAGCATCCCAATTTTGACTGATTCACCCATCATTTTGCCGCAAT CGGCTTAAACAGCTTGGTT