Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046579_T031
CDS Infomation	cds chromosome:B73_RefGen_v4:9:96792665:96809715:1 gene:Zm00001d046579 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor TFIID subunit 1
Sequence	ATGCAAAATGTGCGACCAAACTCCATTGTGCATGCTGTTCGCACTGAAGTGTACCTATGG CCAAAAGCACAGAAATTACCTGGTGAGGACAAGCCTCTACGCCCTCCTGGGGCTTTCAGG AAAAAAACTGACTTGTCTATCAAGGATGGACATGTTTTTTTAATGGAATATTGTGAAGAG AGACCTTTGCTTCTCTCGAATGCAGGAATGGGAGCCCGTCTCTGTACATATTACCAGAAA ACTACCCCTACTGATCAGACAGCTGCATCACTGCGAAACAACAGTGATGGACTGGGCACA GTGCTTGCAATTGATCCTGCTGATAAATCCCCTTTTCTAGGAGAGATACATTCTGGGTCC CACCAATCTTGTCTTGAAACAAACATGTATAGATCACCTGTATTTCCCCATAAGGTTGCA CCAACTGATTACTTATTAGTTCGTTCAGCCAAAGGGGCTCTTTCCCTCCGTCGCATTGAC AAGCTATATGTTGTTGGCCAACAAGAACCTCATATGGAAGTCTTTTCACCAGGGACTAAG AACATGCAAAATTATCTTCTGAACCGAGTTCTTGCATATGTTTATCGTGAGTTTCGTGCT AGAGAGAGGCCTGATGCTATTCCTCAGATTCGAGCTGACGAGTTACCCATACAAAGTCCT CTGACAGAAGCCATAGTGAAAAAACGATTGAAGCATTGTGCAGATTTGAAGAAAGGACCA AAGGGGCATTTTTTCTGGACACAGAGACCTGATTTCCGGGTTCCATCAGAAGAAGAACTG AGGAGATTATTGACGCCAGAAAGTGTTTGCTGTTATGAAAGTATGCAAGCTGGTTTGTAT CGTCTCAAGCGCTTAGGAATTCTGAAGCTTACTCAGCCTGTTGGATTGGCTTCTGCCATG AATCAGCTTCCTGATGAGGCTATTGAGCTTGCTGCTGCATCACATATCGAGAGGGAACTG CAAATCACTAGCTGGAATCTTACAAGTAATTTCGTCGCTTGTACTAATCAGGACAGAGAA AATATAGAAAGATTAGAAATCACTGGTGTTGGAGATCCATCTGGTCGTGGGTTAGGATTC AGCTATGTGCGAGTAGCACCAAAAGCACCTGCCTCCAATTCAGTGCTCAAGAAGAAGTCA GCTGCTGCAAAGGGTACCACTGTAACTGGCACTGATGCTGATCTCCGCAGATTGAGCATG GATGCAGCCCGTGAGTTGCTGCTAAAATTTGGCGTACCTGAAGAGCAAATTGATAAATTA ACAAGGTGGCATCGGATCGCTATGGTGAGGAAGCTTTCAAGTGAGCAAGCTGCATCGGGA ATTACTATCGATGAAATTCCTGTTAGTAAGTTTGCACGTGGACAAAGGATGTCTTTTCTG CAACTTCAGCAGCAAACTAGGGAGAAATGTCAGGAAATTTGGGACAGACAAGTTCAGTCA CTTTCAGCTTTAGATGGTGATGACAATGCCAGTGACACAGAAGCTCACAGTGATCTAGAC TCATTTGCTGGGGATCTTGAGAACTTGCTAGACGCAGAAGAATTTGATGATGAGGATACT AGTACAGCAGACTTGAGAATTGACAAAGCAGATGGAATGAGAGGACTTAAAATGAGAAGG TGCTCTACGCAAGCCCAAATTAACAAGGAAATTGAAGATGATGAAACAGAGGCTTCTCTG GCAAAGAAACTACTTGAAGACGATGGCAATGATGTGAAGAGGAAAAAACAGCCTGTGGAA TTGACAAATTGTGGCACCTCTTTAGTTGCCAATAAAATGAAGCAGAGTAAGACTGGGCAA ACGATCAAATCATCTGGTTATGCTGGTGCATTAACCCCAAAGGAGAACACACCAAGAGAA GGAAAAGAGGTTGAAAATTCTTTTGTTGAGGGTGGTTTGTCCTCAAAACTAAAACCAAAG ATGGCACTCGATGTAAATGAGACTGTTCTAGTTAAAAAGAAAAGTGTTCCAGGAAAGGAT GGACCTAAGGAAAAGAAACAGGGTGCAAGAGGGGATAGTCTTGTTTGTGGAGCCTGTAGT CAGGTTGGGCATATGCGGACTAACAAACTGTGCCCTAAGTATCGGGAGGATCCAGAAATG TCAGAAATGGATGCTAATTCAGTTAAGCCCAACTCTATGGATATAAACCATTTGCAAGCA AAGACACCTAAAAGGTTGATAACAAAAGTTTCCTCTGAAGTTACTGAAACTGAAGGGCCA GAAGGTATTGAGAAGACAAAATCTGTCCCAGTAAAGTTCAAAGTAGGGGCACCTGATAAA TCCTTGGAGAGGAACATGTCAGTCTCCGTTTCACTCGTTTCTGATAAACGTGTCATGGAT GTTACAGACAGTAGATCTACCGGAAAGGTAAACAAGATAGTGATACCTAATAAGATGAAG TCTGATGATTTCCCTCCTGACACTCCAAAGCCATCTGTTGTATTTCGGCCTCCTGCTGAA GAAAAGGATGTACCTCGCAAAAAGATCACCATCAAGCAGCCTAAAGGCATAGACCAGCAA AGACATGTTGAATCTAGGAGTGTTCAGGAACCCACCAGAAAGACAAGAAAAATTGTAGAA TTGTCGAGTTTTGAGGATAAAAGTAGAGAGGATGATCATTGGGTTGGTGGGGAACCCAGC CAGGTGAATTCCTCACATGGGAGGAGGCTGGGTCTGGAAGGAAAAATAAGCAAAGCCACA ATGGAAAATGAAAGATCCTGGAGAGATTTTGAGGAGCGAAGAGAAATGCCACAAGCAAGG CTCTTTGATGCTACGATATATGCATCAAGGGAGGAAGATCATCTAAAGGCAAAAAAGAAA AACAAGAAAAAGAAAAAACATGAATTCAAAGATGATGACTTACTTGATCACAGGCCATAC AGAAATGACAGGAGGGTACCTGAAAGACATCGAGCACTAAAACGATCTAGTCCAGCTCCT GTGGTTGGATATGCATCATCTGCCAAGCGTCGCAGAGGAGGAGAGGTTGAGCTCTCCAAC ATATTGGAAAAAGTAGTTGATCACTTGCGGGGTTTGAGTGGATCACTGCTGTTTTTAAAA CCAGTGACAAAGAAAGAAGCTTCTGATTACCTTGATATCATACGGTACCCAATGGATCTT GGTACCATCAGGGACAAGGTGAGAAAGATGGTGTACAGAAACAGGGATGAATTCAGGCAC GACGTAGCACAGATACAACTCAATGCACACATATACAACGACACTCGCTATCCTCACATC CCTCCGCTTGCTGACGAGCTCATGGAGGTCTGCGACCATCTGCTTTACGAAAACGCAGAT CTGCTCACCGAGGCGGAAGATGCTATCGAGTAG

Peptide Sequence

PEP ID	Zm00001d046579_P031
PEP Infomation	pep chromosome:B73_RefGen_v4:9:96792665:96809715:1 gene:Zm00001d046579 transcript:Zm00001d046579_T031 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor TFIID subunit 1
Sequence	MQNVRPNSIVHAVRTEVYLWPKAQKLPGEDKPLRPPGAFRKKTDLSIKDGHVFLMEYCEE RPLLLSNAGMGARLCTYYQKTTPTDQTAASLRNNSDGLGTVLAIDPADKSPFLGEIHSGS HQSCLETNMYRSPVFPHKVAPTDYLLVRSAKGALSLRRIDKLYVVGQQEPHMEVFSPGTK NMQNYLLNRVLAYVYREFRARERPDAIPQIRADELPIQSPLTEAIVKKRLKHCADLKKGP KGHFFWTQRPDFRVPSEEELRRLLTPESVCCYESMQAGLYRLKRLGILKLTQPVGLASAM NQLPDEAIELAAASHIERELQITSWNLTSNFVACTNQDRENIERLEITGVGDPSGRGLGF SYVRVAPKAPASNSVLKKKSAAAKGTTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKL TRWHRIAMVRKLSSEQAASGITIDEIPVSKFARGQRMSFLQLQQQTREKCQEIWDRQVQS LSALDGDDNASDTEAHSDLDSFAGDLENLLDAEEFDDEDTSTADLRIDKADGMRGLKMRR CSTQAQINKEIEDDETEASLAKKLLEDDGNDVKRKKQPVELTNCGTSLVANKMKQSKTGQ TIKSSGYAGALTPKENTPREGKEVENSFVEGGLSSKLKPKMALDVNETVLVKKKSVPGKD GPKEKKQGARGDSLVCGACSQVGHMRTNKLCPKYREDPEMSEMDANSVKPNSMDINHLQA KTPKRLITKVSSEVTETEGPEGIEKTKSVPVKFKVGAPDKSLERNMSVSVSLVSDKRVMD VTDSRSTGKVNKIVIPNKMKSDDFPPDTPKPSVVFRPPAEEKDVPRKKITIKQPKGIDQQ RHVESRSVQEPTRKTRKIVELSSFEDKSREDDHWVGGEPSQVNSSHGRRLGLEGKISKAT MENERSWRDFEERREMPQARLFDATIYASREEDHLKAKKKNKKKKKHEFKDDDLLDHRPY RNDRRVPERHRALKRSSPAPVVGYASSAKRRRGGEVELSNILEKVVDHLRGLSGSLLFLK PVTKKEASDYLDIIRYPMDLGTIRDKVRKMVYRNRDEFRHDVAQIQLNAHIYNDTRYPHI PPLADELMEVCDHLLYENADLLTEAEDAIE

Transcript Sequence

Transcript ID	Zm00001d046579_T031
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:96792665:96809715:1 gene:Zm00001d046579 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor TFIID subunit 1
Sequence	ATGGTGTGTGTGTATATGGTTAGAGATACAGGGAGATCTTGTTTGGTTCTGTTTCTATAA GCCACGAGATATCATTTTTTTCTCTGGAATACGCAGGAGAACTGCACATTTTTGTATTAA GAAGAAAGAGAGAAGGGGGAAGATCCCCAAAATACAAACAATTCCCGAGACACACCGGGA ACTAGGGAGAGCAGACTCCGACCACACAAGGGAGAGCAGACTCCTGCCACACCACCTACC ACTAGGTCAGCAGCTCGTCTATATGGAAGAAACCAGACAGAGCTTTATCACCAGCCAAAG ACAAACACAAAGCCTTGTCTCTAGCCACCCGAAGAGCAGCAACTAAGGTGCAGTTTGGTT CGCGAAATGTAACGTAAATGGTAATGATAATTATTCACACTTGAATACCTGCGGTAACAA ATATGAATAGGCCGGTATCCATTTTTAGTGTGATATTCGATTACCGTTAGACTTAAACAA ACATGATTTAACGTTGTCGGTTACCCATTACGTTACCAATATGTGAACCAAACGACACCT AATTTCTGAGGGGCTTTTCTGAGAATCTGGCTGTCGGTTACCCATTACGTTTAGGGTTTT AGGGGCCTGTTTGGCTCAGCTTATTTCTGAGGGGCTTTTCTGAGAATCTGGCTGTGGAGA GAATCTGAGTATTGTGGAGATTACATGCGGAGGAAGATAAAAGAGTCCATAGAATTTAGG ATGTAGAAAGTGACGGTTTCCTACTATCACAACGACTCGACCGATTCTGTGTTCACGTTT ATTTTAACAATTTTGACTAAAGTGATTTTCATAGAAGCGGGCTGAAAAGCTGGGCATTTG ACAGTTTGCAGCAGCTTCTGGTGGCCAAAAGTTGAAAAAAGCTGAAACAAACAGTGAAAC AGGGCCAATGACCCCTGAAAAAAAGCCCTGTACGCGGAGCTAGCTGAGTAATTTCCAGAA GCACAAACGAGATCTCATTTCCCTTACCTATTTATCTATCTATATAGGTCTCTCCAATTA ATCAATCTATTATTTTGCGCTATCTCTATTGCTAACAGCATCCTAACCGACTCTAACTCT AAATGAACTGGATGCATGCAGTCCTGTTCTGTTTTATCTCTAACCTCTAATCCGAGTCGG TTTCTATTCTAGCCCAAGAGGATCTTGGACAACTAAGTTTGTAGCCTATGTATAGCATAT TCTAACACTCACCACCTTAGCTTTTTGCAGAATTGAAGCCTTCTGAGAAGATCAAATTGT TCTGTTCTGGGAAAGAGCTTCAGGATGACATCTCGTTAGCAATGCAAAATGTGCGACCAA ACTCCATTGTGCATGCTGTTCGCACTGAAGTGTACCTATGGCCAAAAGCACAGAAATTAC CTGGTGAGGACAAGCCTCTACGCCCTCCTGGGGCTTTCAGGAAAAAAACTGACTTGTCTA TCAAGGATGGACATGTTTTTTTAATGGAATATTGTGAAGAGAGACCTTTGCTTCTCTCGA ATGCAGGAATGGGAGCCCGTCTCTGTACATATTACCAGAAAACTACCCCTACTGATCAGA CAGCTGCATCACTGCGAAACAACAGTGATGGACTGGGCACAGTGCTTGCAATTGATCCTG CTGATAAATCCCCTTTTCTAGGAGAGATACATTCTGGGTCCCACCAATCTTGTCTTGAAA CAAACATGTATAGATCACCTGTATTTCCCCATAAGGTTGCACCAACTGATTACTTATTAG TTCGTTCAGCCAAAGGGGCTCTTTCCCTCCGTCGCATTGACAAGCTATATGTTGTTGGCC AACAAGAACCTCATATGGAAGTCTTTTCACCAGGGACTAAGAACATGCAAAATTATCTTC TGAACCGAGTTCTTGCATATGTTTATCGTGAGTTTCGTGCTAGAGAGAGGCCTGATGCTA TTCCTCAGATTCGAGCTGACGAGTTACCCATACAAAGTCCTCTGACAGAAGCCATAGTGA AAAAACGATTGAAGCATTGTGCAGATTTGAAGAAAGGACCAAAGGGGCATTTTTTCTGGA CACAGAGACCTGATTTCCGGGTTCCATCAGAAGAAGAACTGAGGAGATTATTGACGCCAG AAAGTGTTTGCTGTTATGAAAGTATGCAAGCTGGTTTGTATCGTCTCAAGCGCTTAGGAA TTCTGAAGCTTACTCAGCCTGTTGGATTGGCTTCTGCCATGAATCAGCTTCCTGATGAGG CTATTGAGCTTGCTGCTGCATCACATATCGAGAGGGAACTGCAAATCACTAGCTGGAATC TTACAAGTAATTTCGTCGCTTGTACTAATCAGGACAGAGAAAATATAGAAAGATTAGAAA TCACTGGTGTTGGAGATCCATCTGGTCGTGGGTTAGGATTCAGCTATGTGCGAGTAGCAC CAAAAGCACCTGCCTCCAATTCAGTGCTCAAGAAGAAGTCAGCTGCTGCAAAGGGTACCA CTGTAACTGGCACTGATGCTGATCTCCGCAGATTGAGCATGGATGCAGCCCGTGAGTTGC TGCTAAAATTTGGCGTACCTGAAGAGCAAATTGATAAATTAACAAGGTGGCATCGGATCG CTATGGTGAGGAAGCTTTCAAGTGAGCAAGCTGCATCGGGAATTACTATCGATGAAATTC CTGTTAGTAAGTTTGCACGTGGACAAAGGATGTCTTTTCTGCAACTTCAGCAGCAAACTA GGGAGAAATGTCAGGAAATTTGGGACAGACAAGTTCAGTCACTTTCAGCTTTAGATGGTG ATGACAATGCCAGTGACACAGAAGCTCACAGTGATCTAGACTCATTTGCTGGGGATCTTG AGAACTTGCTAGACGCAGAAGAATTTGATGATGAGGATACTAGTACAGCAGACTTGAGAA TTGACAAAGCAGATGGAATGAGAGGACTTAAAATGAGAAGGTGCTCTACGCAAGCCCAAA TTAACAAGGAAATTGAAGATGATGAAACAGAGGCTTCTCTGGCAAAGAAACTACTTGAAG ACGATGGCAATGATGTGAAGAGGAAAAAACAGCCTGTGGAATTGACAAATTGTGGCACCT CTTTAGTTGCCAATAAAATGAAGCAGAGTAAGACTGGGCAAACGATCAAATCATCTGGTT ATGCTGGTGCATTAACCCCAAAGGAGAACACACCAAGAGAAGGAAAAGAGGTTGAAAATT CTTTTGTTGAGGGTGGTTTGTCCTCAAAACTAAAACCAAAGATGGCACTCGATGTAAATG AGACTGTTCTAGTTAAAAAGAAAAGTGTTCCAGGAAAGGATGGACCTAAGGAAAAGAAAC AGGGTGCAAGAGGGGATAGTCTTGTTTGTGGAGCCTGTAGTCAGGTTGGGCATATGCGGA CTAACAAACTGTGCCCTAAGTATCGGGAGGATCCAGAAATGTCAGAAATGGATGCTAATT CAGTTAAGCCCAACTCTATGGATATAAACCATTTGCAAGCAAAGACACCTAAAAGGTTGA TAACAAAAGTTTCCTCTGAAGTTACTGAAACTGAAGGGCCAGAAGGTATTGAGAAGACAA AATCTGTCCCAGTAAAGTTCAAAGTAGGGGCACCTGATAAATCCTTGGAGAGGAACATGT CAGTCTCCGTTTCACTCGTTTCTGATAAACGTGTCATGGATGTTACAGACAGTAGATCTA CCGGAAAGGTAAACAAGATAGTGATACCTAATAAGATGAAGTCTGATGATTTCCCTCCTG ACACTCCAAAGCCATCTGTTGTATTTCGGCCTCCTGCTGAAGAAAAGGATGTACCTCGCA AAAAGATCACCATCAAGCAGCCTAAAGGCATAGACCAGCAAAGACATGTTGAATCTAGGA GTGTTCAGGAACCCACCAGAAAGACAAGAAAAATTGTAGAATTGTCGAGTTTTGAGGATA AAAGTAGAGAGGATGATCATTGGGTTGGTGGGGAACCCAGCCAGGTGAATTCCTCACATG GGAGGAGGCTGGGTCTGGAAGGAAAAATAAGCAAAGCCACAATGGAAAATGAAAGATCCT GGAGAGATTTTGAGGAGCGAAGAGAAATGCCACAAGCAAGGCTCTTTGATGCTACGATAT ATGCATCAAGGGAGGAAGATCATCTAAAGGCAAAAAAGAAAAACAAGAAAAAGAAAAAAC ATGAATTCAAAGATGATGACTTACTTGATCACAGGCCATACAGAAATGACAGGAGGGTAC CTGAAAGACATCGAGCACTAAAACGATCTAGTCCAGCTCCTGTGGTTGGATATGCATCAT CTGCCAAGCGTCGCAGAGGAGGAGAGGTTGAGCTCTCCAACATATTGGAAAAAGTAGTTG ATCACTTGCGGGGTTTGAGTGGATCACTGCTGTTTTTAAAACCAGTGACAAAGAAAGAAG CTTCTGATTACCTTGATATCATACGGTACCCAATGGATCTTGGTACCATCAGGGACAAGG TGAGAAAGATGGTGTACAGAAACAGGGATGAATTCAGGCACGACGTAGCACAGATACAAC TCAATGCACACATATACAACGACACTCGCTATCCTCACATCCCTCCGCTTGCTGACGAGC TCATGGAGGTCTGCGACCATCTGCTTTACGAAAACGCAGATCTGCTCACCGAGGCGGAAG ATGCTATCGAGTAGCAATATAAAAAGCTAGATTTAGCATTTGGATCTTGCTATATCCTAA CATAGATGATGTATCTATCTTCTGATCTGTAGGAGGGGAAAAGGTTGTACATTTTTTGGG CCTAGCAGCAATCTACATGTGATCCCGAATCCAGCCAGCTTCTGTTGGTATTGTGTTGAG AGGTAGTGGAAGTACAAAATGTCTAGGTTAGCCACTCAATGGCCTCATGTTGTAAAAATG TAGAATGTAATCATGTCCATATACATGGCATATATCGGTC