Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046554_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:9:95762517:95766297:-1 gene:Zm00001d046554 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copine-1%3B Copine-1 isoform 1%3B Copine-1 isoform 2
Sequence	ATGGGGCAAAAGGACTCCAAGCCTTCAAATGGATATGGCTACTCTTCTGATTACGGGGGT ACTTCATCGGGATATAACTTGAGAAATACTGGAAGTACGTCCTCCAGTTATGGCGCGAGG TATGTGCCTTCTTCAGAGAACAATGTACAGCCAGAAACACATGCCAGGTTGCAGAGGAAG TATTCCAGGATTGGTGATGACTATCGTTCTCTGAGTCAGGTGACTGAAGCTTTGGCGCAA GCAGGCCTTGAATCTTCAAATCTTATCGTAGGCATTGATTTTACAAAGAGCAATGAATGG ACAGGTAAAATTTCATTTAATCGCCGCTGCCTACATGATATTGGAAACACTCCGAACCCA TATGAGCAAGCTATATCTATTATTGGAAGGACACTTTCAGTATTTGATGAAGATAACTTG ATTCCCTGCTTTGGATTTGGTGACGCATCAACTCATGATCAGGAGGTATTCAGCTTTTAC CCAGAGAACCGCCCATGCAACGGATTTGAAGAGGCACTAGACAGATACAGAGAAATCGTT CCAACTCTTCGATTAGCAGGACCTACATCTTTCGCTCCGATGATCGAGACAGCAATTGGA ATTGTTGACAGCACTGGTGGTCAATATCATGTTCTTCTGATAATCGCAGATGGACAGGTT ACCCGAAGTGTCGATACACAATCTGGACAATTGAGTCCACAGGAGCGGGATACTATAGAT GCAATAGTAAGAGCAAGCCAGTTCCCCCTGTCAATTGTTCTTGTTGGGGTTGGTGATGGA CCATGGGACATGATGCACCAGTTTGATGACAATATACCTGCTCGGTCATTTGACAATTTC CAGTTTGTGAACTTCACGGAGATTATGTCAAAGAGCATAGCAGCTGACAGAAAGGAGGCA GAATTTGCATTGTCAGCGCTGATGGAAATCCCTACACAGTACAAAGCAACACTTGATCTC CAACTCTTAGGCCGCCGCCAAAGAATAACTCCAAGAATTGCTCTGCCGCCACCAACAAGG ACTGCTTATTCACGGACTACTAGCTTTAGCCAACAGTCTGGTGTTTATTCGCGATCAAGT AGCTTTGACCAACAAACAAGTGTCTACCAGCAACGTTCTGAGAGCTTGAAACAGCAGCAA CCTGCAGCCCCAAAGGGACCTGACACTTACGTATCAGAAAGTGCTCTGGAGGACAGAATT CTGTGCCCCATCTGCATGTATAAATCGAAGGACCTTGCATTTGGGTGTGGACATCAGACT TGCTATGAATGCGGGAGAGATTTGGAGCGCTGCCCTCTGTGCCAGCAACACATAACCACG AGGATCAGGCTCTACTGA

Peptide Sequence

PEP ID	Zm00001d046554_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:9:95762517:95766297:-1 gene:Zm00001d046554 transcript:Zm00001d046554_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copine-1%3B Copine-1 isoform 1%3B Copine-1 isoform 2
Sequence	MGQKDSKPSNGYGYSSDYGGTSSGYNLRNTGSTSSSYGARYVPSSENNVQPETHARLQRK YSRIGDDYRSLSQVTEALAQAGLESSNLIVGIDFTKSNEWTGKISFNRRCLHDIGNTPNP YEQAISIIGRTLSVFDEDNLIPCFGFGDASTHDQEVFSFYPENRPCNGFEEALDRYREIV PTLRLAGPTSFAPMIETAIGIVDSTGGQYHVLLIIADGQVTRSVDTQSGQLSPQERDTID AIVRASQFPLSIVLVGVGDGPWDMMHQFDDNIPARSFDNFQFVNFTEIMSKSIAADRKEA EFALSALMEIPTQYKATLDLQLLGRRQRITPRIALPPPTRTAYSRTTSFSQQSGVYSRSS SFDQQTSVYQQRSESLKQQQPAAPKGPDTYVSESALEDRILCPICMYKSKDLAFGCGHQT CYECGRDLERCPLCQQHITTRIRLY

Transcript Sequence

Transcript ID	Zm00001d046554_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:95762517:95766297:-1 gene:Zm00001d046554 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copine-1%3B Copine-1 isoform 1%3B Copine-1 isoform 2
Sequence	AGGAAGCTCATCTGGGTGTTGGCCTCATCCCCTGCACAAGCTGAGGAATGGGGCAAAAGG ACTCCAAGCCTTCAAATGGATATGGCTACTCTTCTGATTACGGGGGTACTTCATCGGGAT ATAACTTGAGAAATACTGGAAGTACGTCCTCCAGTTATGGCGCGAGGTATGTGCCTTCTT CAGAGAACAATGTACAGCCAGAAACACATGCCAGGTTGCAGAGGAAGTATTCCAGGATTG GTGATGACTATCGTTCTCTGAGTCAGGTGACTGAAGCTTTGGCGCAAGCAGGCCTTGAAT CTTCAAATCTTATCGTAGGCATTGATTTTACAAAGAGCAATGAATGGACAGGTAAAATTT CATTTAATCGCCGCTGCCTACATGATATTGGAAACACTCCGAACCCATATGAGCAAGCTA TATCTATTATTGGAAGGACACTTTCAGTATTTGATGAAGATAACTTGATTCCCTGCTTTG GATTTGGTGACGCATCAACTCATGATCAGGAGGTATTCAGCTTTTACCCAGAGAACCGCC CATGCAACGGATTTGAAGAGGCACTAGACAGATACAGAGAAATCGTTCCAACTCTTCGAT TAGCAGGACCTACATCTTTCGCTCCGATGATCGAGACAGCAATTGGAATTGTTGACAGCA CTGGTGGTCAATATCATGTTCTTCTGATAATCGCAGATGGACAGGTTACCCGAAGTGTCG ATACACAATCTGGACAATTGAGTCCACAGGAGCGGGATACTATAGATGCAATAGTAAGAG CAAGCCAGTTCCCCCTGTCAATTGTTCTTGTTGGGGTTGGTGATGGACCATGGGACATGA TGCACCAGTTTGATGACAATATACCTGCTCGGTCATTTGACAATTTCCAGTTTGTGAACT TCACGGAGATTATGTCAAAGAGCATAGCAGCTGACAGAAAGGAGGCAGAATTTGCATTGT CAGCGCTGATGGAAATCCCTACACAGTACAAAGCAACACTTGATCTCCAACTCTTAGGCC GCCGCCAAAGAATAACTCCAAGAATTGCTCTGCCGCCACCAACAAGGACTGCTTATTCAC GGACTACTAGCTTTAGCCAACAGTCTGGTGTTTATTCGCGATCAAGTAGCTTTGACCAAC AAACAAGTGTCTACCAGCAACGTTCTGAGAGCTTGAAACAGCAGCAACCTGCAGCCCCAA AGGGACCTGACACTTACGTATCAGAAAGTGCTCTGGAGGACAGAATTCTGTGCCCCATCT GCATGTATAAATCGAAGGACCTTGCATTTGGGTGTGGACATCAGACTTGCTATGAATGCG GGAGAGATTTGGAGCGCTGCCCTCTGTGCCAGCAACACATAACCACGAGGATCAGGCTCT ACTGATTTGAAGCCAATGGGATTGAAAAATGTTCAGAACCAGCTTTGATGCTACTGTGCT TCATCATTTTGTAATTCTGAATGAGATAACACTGTCTCAGTAGTTTCGCTACACTAGTTA TGCCAAAAGGAAGCGCACCAGAAAATAATGTACAGATTTTTC