Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046480_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:91882164:91884352:1 gene:Zm00001d046480 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

ATGATCAGGCGACAACCCGGCATGGATCGGTTCCTGCAGCTGCTGGCCGCCGGCGTGGCC
GTGCTACTGCTAGTGGCACCGCCGGCCATGGCTGACGACGACATTGTAGAAGTCGGCGTC
AACTGGGGTTCGCAGCTCTCGCACCCGCTTCTCCCCGGCTCCGTGGTGAAGATGCTCAAG
GCGAACCGCATCGCCAGGGTCAAGATGTTCGACGCCGACTCCTGGCCCGTCGGCGCGCTC
GTCGACTCCGGCATTGAGGTCATGCTCGGCATCCCCAACGACATGCTCGAGACCATGAGC
AGCAGCTACGGCAACGCCCAGGATTGGGTCAAGGAGAACGTCACCGCCTACGGTGACAAG
CTTAAGCTCAAGTATGTGGCAGTGGGGAACGAGCCATTTCTCAAGGCATACAACGGGTCA
TTCATGAAGACCACCTTCCCGGCGCTCAAGAACATCCAGAAGGCCCTTGACGAGGCCGGC
GTCGGCAACACCGTGAAGGCAGTCGTCCCGCTCAACGCCGACGTCTACGTCTCCCCGGAC
GACAAGCCATCTTCCGGCGCGTTCCGGCCTGACATCAACGGCCTCATGACCGACATGGTC
AAGTTCCTGCACGACCACGGCGCGCCCTTCGTCGTCAACATCTACCCCTTCCTCAGCCTG
TACCAGAGCGACAACTTCCCCTTCGAGTTCGCCTTCTTCGACGGCGGCAAGAACATCCAG
GACAAGGGCGGCGTCACCTACTCCAATGTGTTCGACGCCAACTACGACACGCTCGTGCAC
GCGCTGAAGAAGGCCGGCGTGCCCGACCTCAAGGTCATCGTCGGCGAGGCCGGCTGGCCT
ACCGATGGCAACAAGTACGCCAACTTCAAGCTGGCGCGGCGGTTCTACGACGGGCTCCTC
AGGAAGCTGGCCAAGAACGAAGGCACCCCGGTCCGGAAGGGCAAGATGGAGGTCTACCTG
TTCGGCCTATTCGACGAGGACATGAAGAGCATCGCGCCGGGGAACTTCGAGCGGCACTGG
GGCATCTTCACCTACGACGGCAAGCCCAAGTTCCCCATCGACCTGACGGGGCAGGGCCAC
GAAAAGCTCCTCTCCCCAGTTACCGACGTTAAGTACCTCCCGAACCAGTGGTGCGTGTTC
GACGACGGGGCCGAGGACAAGTCCAAGCTGCCTAGCAACGTCCAGTATGCATGTGCGAGC
GGCGACTGCACGGCACTCGGCTATGGCTGCTCCTGCAATGGGCTGGACGAGAAGAGCAAC
ATCTCCTACGCGTTCAACATGTACTTCCAGATGCAGGACCAGGATGTGCGCGCCTGCGAC
TTCGAAGGGCTTGCCAAGATCACAGACAAGAACGCCTCCACGCGCGGCTGCCTGTTCCCG
GTCCAGATAATCAGTGCCAGTGCTCGGGTGGCGCCAGCTCTATTGCTGGCGGCGCTATTG
GCATTGCTTGTGATTGTGTTCGTGTAG

Peptide Sequence

PEP ID

Zm00001d046480_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:91882164:91884352:1 gene:Zm00001d046480 transcript:Zm00001d046480_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

MIRRQPGMDRFLQLLAAGVAVLLLVAPPAMADDDIVEVGVNWGSQLSHPLLPGSVVKMLK
ANRIARVKMFDADSWPVGALVDSGIEVMLGIPNDMLETMSSSYGNAQDWVKENVTAYGDK
LKLKYVAVGNEPFLKAYNGSFMKTTFPALKNIQKALDEAGVGNTVKAVVPLNADVYVSPD
DKPSSGAFRPDINGLMTDMVKFLHDHGAPFVVNIYPFLSLYQSDNFPFEFAFFDGGKNIQ
DKGGVTYSNVFDANYDTLVHALKKAGVPDLKVIVGEAGWPTDGNKYANFKLARRFYDGLL
RKLAKNEGTPVRKGKMEVYLFGLFDEDMKSIAPGNFERHWGIFTYDGKPKFPIDLTGQGH
EKLLSPVTDVKYLPNQWCVFDDGAEDKSKLPSNVQYACASGDCTALGYGCSCNGLDEKSN
ISYAFNMYFQMQDQDVRACDFEGLAKITDKNASTRGCLFPVQIISASARVAPALLLAALL
ALLVIVFV

Transcript Sequence

Transcript ID

Zm00001d046480_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:91882164:91884352:1 gene:Zm00001d046480 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

TTTTACCCGCCATTTTCCTCTCCTCTCCTCTCCTCTCCCTCCATCTAAGGAGAGGAGAGA
TATGCAGCTCACGAGCTCCACCAAATCCTGACCTCCCAAAGCTGTGGTCGCGATCCAAAC
AGAAGGGAAATGATCAGGCGACAACCCGGCATGGATCGGTTCCTGCAGCTGCTGGCCGCC
GGCGTGGCCGTGCTACTGCTAGTGGCACCGCCGGCCATGGCTGACGACGACATTGTAGAA
GTCGGCGTCAACTGGGGTTCGCAGCTCTCGCACCCGCTTCTCCCCGGCTCCGTGGTGAAG
ATGCTCAAGGCGAACCGCATCGCCAGGGTCAAGATGTTCGACGCCGACTCCTGGCCCGTC
GGCGCGCTCGTCGACTCCGGCATTGAGGTCATGCTCGGCATCCCCAACGACATGCTCGAG
ACCATGAGCAGCAGCTACGGCAACGCCCAGGATTGGGTCAAGGAGAACGTCACCGCCTAC
GGTGACAAGCTTAAGCTCAAGTATGTGGCAGTGGGGAACGAGCCATTTCTCAAGGCATAC
AACGGGTCATTCATGAAGACCACCTTCCCGGCGCTCAAGAACATCCAGAAGGCCCTTGAC
GAGGCCGGCGTCGGCAACACCGTGAAGGCAGTCGTCCCGCTCAACGCCGACGTCTACGTC
TCCCCGGACGACAAGCCATCTTCCGGCGCGTTCCGGCCTGACATCAACGGCCTCATGACC
GACATGGTCAAGTTCCTGCACGACCACGGCGCGCCCTTCGTCGTCAACATCTACCCCTTC
CTCAGCCTGTACCAGAGCGACAACTTCCCCTTCGAGTTCGCCTTCTTCGACGGCGGCAAG
AACATCCAGGACAAGGGCGGCGTCACCTACTCCAATGTGTTCGACGCCAACTACGACACG
CTCGTGCACGCGCTGAAGAAGGCCGGCGTGCCCGACCTCAAGGTCATCGTCGGCGAGGCC
GGCTGGCCTACCGATGGCAACAAGTACGCCAACTTCAAGCTGGCGCGGCGGTTCTACGAC
GGGCTCCTCAGGAAGCTGGCCAAGAACGAAGGCACCCCGGTCCGGAAGGGCAAGATGGAG
GTCTACCTGTTCGGCCTATTCGACGAGGACATGAAGAGCATCGCGCCGGGGAACTTCGAG
CGGCACTGGGGCATCTTCACCTACGACGGCAAGCCCAAGTTCCCCATCGACCTGACGGGG
CAGGGCCACGAAAAGCTCCTCTCCCCAGTTACCGACGTTAAGTACCTCCCGAACCAGTGG
TGCGTGTTCGACGACGGGGCCGAGGACAAGTCCAAGCTGCCTAGCAACGTCCAGTATGCA
TGTGCGAGCGGCGACTGCACGGCACTCGGCTATGGCTGCTCCTGCAATGGGCTGGACGAG
AAGAGCAACATCTCCTACGCGTTCAACATGTACTTCCAGATGCAGGACCAGGATGTGCGC
GCCTGCGACTTCGAAGGGCTTGCCAAGATCACAGACAAGAACGCCTCCACGCGCGGCTGC
CTGTTCCCGGTCCAGATAATCAGTGCCAGTGCTCGGGTGGCGCCAGCTCTATTGCTGGCG
GCGCTATTGGCATTGCTTGTGATTGTGTTCGTGTAGAGTGGGGATTTCGTCACTTCGTGT
AGAACTGTGTTCGCGTGACCAAAAAAATAATATGAATTCCTTGCTGGCATAAAAGATGGG
CTAGACATCAAAACACTAGAGCATGCTACAGATTGCGAAACTATAACAAGTGGTAAATAT
ATCATATTTATGTGATAACAAACAAAGCTTATTACGAGCAAACTAGCAAACAACCATCAA
AACTCTTGCTACGAGGCATCCCTGGATTGCTCTAAGTTGGCAAACAAACATAGGATGTCA
ATGTTAGGTCTATAAGATCCCAGCCCATGACCCTAGCCACTAGAATTGATGAAACTAAGT
GTATACCTTCGAGATGGGAAGTCACCATGAAAATTGGGAATCCGGCGAATGGCATCGGAG
ACAGCGTCTATATAGGGCCTGTTTGTTTCAGCTTATAGATTATATAATCTGGATTATAAT
CTAAATTATATAATCTAGATATATTATAATCTATATGTAGTTGTTTGGTAGTTTAGATTA
TATAAAT