Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046440_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:89862594:89864336:1 gene:Zm00001d046440 gene_biotype:protein_coding transcript_biotype:protein_coding description:FscO

Sequence

ATGGGAAAGAAGGTGGCTGTTGTGGTGGGAGGGAGCGTTGCTGGGCTAGCGTGCGCTCAC
GCCGTGGCTGGCGCGGGATGGGAGGTGGTTGTGCTGGAGAAGGCGGCAGCGCCGGCGGCG
GGGAGCGGCACGGGCGCCGGACTGGGCCTCGACGCGCAGTCTATGGAGATTATCTCGCGC
TGGATCCCGGGGTGGGGAATCGACGCGGTCACGCTGCCGCTCGCCGTCGATCTGAACATA
GCCACGGACAGCGCGACGAAGGCGGCGCGGACGCTGGCGAGGGACGAAGACTTCAAATTC
CGCGCGGCTCACTGGGGCGACCTGCACCGGCGGCTGCACGAGGAGCTGCCGCCCGCGGTG
ACCGTGCTGTGGGGGCACCAGTTCTTGTCGTTCGAGGCGCCGGACGACACACGCGGGGTC
GTCGCGACGGCCCGCGTGCTGCGGACGGGAGGGACGGTTGAGGCCACGGGGGACCTGCTC
ATCGCCGCGGACGGCTCCACGTCGTCTGTCCGTCGCAGCTTCTTGCCAGACCTCAAGCTC
AGGTACTCCGGGTACTGCGCGTGGCGAGGCGTGTTTGATTTCAGCGGGAAAGAGAGCTCT
GACACCATGACCAGCATCCGAAGAGCCTACCCGGAGCTCGGCAACTGCCTCTACTTCGAC
CTTGCTTACAAGACCCACGCCGTGCTCTACGAGCTGCCCAGGAGCAGGCTCAACTGGCTC
TGGTACATCAACGGCCCAGAACCGGAGCTCGCGGGGAACTCGGTGACCATGGAGGCGACT
GACGCCATGGTGGGACGAATGCGGAACGAGGCGGAGCGCGTCTGGTGCCCCGAGCTGGCG
CGTCTGGTCAGGGAGACCGCGGCGCCGTTCGTAAACGTGATCTACGACGCAGACCCGCTG
CGGCGGTTGTCGTGGACGGGCGGCCGCGTGGTACTGGTCGGCGACGCGGCGCACCCGACG
ACTCCGCACGGGTTGCGGAGCACCAACATGTCGGTCATGGACGCGTGCACGCTCGGGCAG
TGCTTGGCGAACTGGAACTCAGAGCCGACGCCTGCGCGCGCGCTGGCAGAGTACGAGGCG
GTGCGCCTGCCCGTTGTGGCGGAACAAGTGCTCCACGCCCGCCAGCTCGGGCGGCTCAAG
CAGGGCCTGCCAGTGGACGGTGAGGCGGAGGACGGGTTTGACGTGACGACGGCAAAGGCC
GAGGTGCTGCAGCTACGGCAGAGGACAATGCCGTTCTTCGATGGCGCACCTGCCGCAGTT
GGCGGTGATTTTCCTCTCGTTGGCAGTACAAGATGA

Peptide Sequence

PEP ID

Zm00001d046440_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:89862594:89864336:1 gene:Zm00001d046440 transcript:Zm00001d046440_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:FscO

Sequence

MGKKVAVVVGGSVAGLACAHAVAGAGWEVVVLEKAAAPAAGSGTGAGLGLDAQSMEIISR
WIPGWGIDAVTLPLAVDLNIATDSATKAARTLARDEDFKFRAAHWGDLHRRLHEELPPAV
TVLWGHQFLSFEAPDDTRGVVATARVLRTGGTVEATGDLLIAADGSTSSVRRSFLPDLKL
RYSGYCAWRGVFDFSGKESSDTMTSIRRAYPELGNCLYFDLAYKTHAVLYELPRSRLNWL
WYINGPEPELAGNSVTMEATDAMVGRMRNEAERVWCPELARLVRETAAPFVNVIYDADPL
RRLSWTGGRVVLVGDAAHPTTPHGLRSTNMSVMDACTLGQCLANWNSEPTPARALAEYEA
VRLPVVAEQVLHARQLGRLKQGLPVDGEAEDGFDVTTAKAEVLQLRQRTMPFFDGAPAAV
GGDFPLVGSTR

Transcript Sequence

Transcript ID

Zm00001d046440_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:89862594:89864336:1 gene:Zm00001d046440 gene_biotype:protein_coding transcript_biotype:protein_coding description:FscO

Sequence

TTGTGGACCTGTGGCCTTGTGGGGCAATTGGCTAGATGGGAAAGAAGGTGGCTGTTGTGG
TGGGAGGGAGCGTTGCTGGGCTAGCGTGCGCTCACGCCGTGGCTGGCGCGGGATGGGAGG
TGGTTGTGCTGGAGAAGGCGGCAGCGCCGGCGGCGGGGAGCGGCACGGGCGCCGGACTGG
GCCTCGACGCGCAGTCTATGGAGATTATCTCGCGCTGGATCCCGGGGTGGGGAATCGACG
CGGTCACGCTGCCGCTCGCCGTCGATCTGAACATAGCCACGGACAGCGCGACGAAGGCGG
CGCGGACGCTGGCGAGGGACGAAGACTTCAAATTCCGCGCGGCTCACTGGGGCGACCTGC
ACCGGCGGCTGCACGAGGAGCTGCCGCCCGCGGTGACCGTGCTGTGGGGGCACCAGTTCT
TGTCGTTCGAGGCGCCGGACGACACACGCGGGGTCGTCGCGACGGCCCGCGTGCTGCGGA
CGGGAGGGACGGTTGAGGCCACGGGGGACCTGCTCATCGCCGCGGACGGCTCCACGTCGT
CTGTCCGTCGCAGCTTCTTGCCAGACCTCAAGCTCAGGTACTCCGGGTACTGCGCGTGGC
GAGGCGTGTTTGATTTCAGCGGGAAAGAGAGCTCTGACACCATGACCAGCATCCGAAGAG
CCTACCCGGAGCTCGGCAACTGCCTCTACTTCGACCTTGCTTACAAGACCCACGCCGTGC
TCTACGAGCTGCCCAGGAGCAGGCTCAACTGGCTCTGGTACATCAACGGCCCAGAACCGG
AGCTCGCGGGGAACTCGGTGACCATGGAGGCGACTGACGCCATGGTGGGACGAATGCGGA
ACGAGGCGGAGCGCGTCTGGTGCCCCGAGCTGGCGCGTCTGGTCAGGGAGACCGCGGCGC
CGTTCGTAAACGTGATCTACGACGCAGACCCGCTGCGGCGGTTGTCGTGGACGGGCGGCC
GCGTGGTACTGGTCGGCGACGCGGCGCACCCGACGACTCCGCACGGGTTGCGGAGCACCA
ACATGTCGGTCATGGACGCGTGCACGCTCGGGCAGTGCTTGGCGAACTGGAACTCAGAGC
CGACGCCTGCGCGCGCGCTGGCAGAGTACGAGGCGGTGCGCCTGCCCGTTGTGGCGGAAC
AAGTGCTCCACGCCCGCCAGCTCGGGCGGCTCAAGCAGGGCCTGCCAGTGGACGGTGAGG
CGGAGGACGGGTTTGACGTGACGACGGCAAAGGCCGAGGTGCTGCAGCTACGGCAGAGGA
CAATGCCGTTCTTCGATGGCGCACCTGCCGCAGTTGGCGGTGATTTTCCTCTCGTTGGCA
GTACAAGATGAATCGAGACAGCATTACCTGTATGACTCTATGACATTTAATCATGGTTTG
GCATAGCTTCACCAAATACAATTAAAAAATATATAGTTTAGAATTACCTGTATGACTATG
AAATTTAATGATGGCTTGGCATAGCTTCACCAAATACAATTAAAAAATATA