Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046389_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:9:86784333:86785592:1 gene:Zm00001d046389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectate lyase 3
Sequence	ATGGGGACGACGACGAGGAAGTCTAAGTTCAGCGGGCCGTGCAGGGCGACGAACCCGATC GACCGGTGCTGGCGGTGCCGGCAGGACTGGGCGACGGACCGGAAGCGCCTGGCGCGGTGC GCCAAGGGGTTCGGGCGCAACACCACCGGCGGGCTGGCCGGCAAGTTCTACGTGGTGACG GACGGCACCGACGACGACGTGGTGAACCCGCGCCCCGGCACGCTCCGGTGGGGCGTCATC CAGATCGAGCCGCTGTGGATCACCTTCGCCAAGACCATGATCATCACGCTTAAGGAGGAG CTCATCATCCGCGGCGACAAGACCATTGACGGCCGCGGCGTGCAGGTGCGCATCACCAAC GGCGCGCAGCTCACGTTGCAGTTCGTCAACAACGTCATCATCCACAACATCCACATCAAC GACATCGTCTCCTCCAACAAGGACGGCGGCTACGTCCGCGACTCGCCGGACCACTTCGGC TGGCGCACCGTCTCCGACGGCGACGGCATCACCGTCTTCGGCTCCACCAACGTGTGGCTG GACCACCTCTCCCTCTCCAACTGCCAGGACGGCCTCATCGACGTCATCGCCAAGTCCACC GGCGTCACCATCTCCAACTGCCACCTCACCAACCACAACGATGTCATGCTCTTCTTCCAC GTGGTCAACAACGACTACACGCACTGGCTCATGTACGCCATCGGCGGCAGCAAGGCCCCC ACCATCATCAGCCAGGGCAACCGCTACATCGCGCCGCCCAACCTTGCCGCGAAGCAGGTC ACCAAGCAGCATGACACGCCGGAGTCGGTGTGGAAAAACTGGGTGTGGCACTCCGAGAAC GACCTCTTCATGGAAGGCGCCTACTTCACCGTCACCGGCGGCCAGATCAACAGGCAGTTC AACAAGAAGGACCTCATCAAGCCCAGGAACGGGTCCTACGTCACCAGGCTCACGCGCTAC GCCGGCTCCCTCGCCTGCACGCCCGGCAAGCCCTGCTAG

Peptide Sequence

PEP ID	Zm00001d046389_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:9:86784333:86785592:1 gene:Zm00001d046389 transcript:Zm00001d046389_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectate lyase 3
Sequence	MGTTTRKSKFSGPCRATNPIDRCWRCRQDWATDRKRLARCAKGFGRNTTGGLAGKFYVVT DGTDDDVVNPRPGTLRWGVIQIEPLWITFAKTMIITLKEELIIRGDKTIDGRGVQVRITN GAQLTLQFVNNVIIHNIHINDIVSSNKDGGYVRDSPDHFGWRTVSDGDGITVFGSTNVWL DHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFFHVVNNDYTHWLMYAIGGSKAP TIISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQF NKKDLIKPRNGSYVTRLTRYAGSLACTPGKPC

Transcript Sequence

Transcript ID	Zm00001d046389_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:86784333:86785592:1 gene:Zm00001d046389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectate lyase 3
Sequence	GATGGGGACGACGACGAGGAAGTCTAAGTTCAGCGGGCCGTGCAGGGCGACGAACCCGAT CGACCGGTGCTGGCGGTGCCGGCAGGACTGGGCGACGGACCGGAAGCGCCTGGCGCGGTG CGCCAAGGGGTTCGGGCGCAACACCACCGGCGGGCTGGCCGGCAAGTTCTACGTGGTGAC GGACGGCACCGACGACGACGTGGTGAACCCGCGCCCCGGCACGCTCCGGTGGGGCGTCAT CCAGATCGAGCCGCTGTGGATCACCTTCGCCAAGACCATGATCATCACGCTTAAGGAGGA GCTCATCATCCGCGGCGACAAGACCATTGACGGCCGCGGCGTGCAGGTGCGCATCACCAA CGGCGCGCAGCTCACGTTGCAGTTCGTCAACAACGTCATCATCCACAACATCCACATCAA CGACATCGTCTCCTCCAACAAGGACGGCGGCTACGTCCGCGACTCGCCGGACCACTTCGG CTGGCGCACCGTCTCCGACGGCGACGGCATCACCGTCTTCGGCTCCACCAACGTGTGGCT GGACCACCTCTCCCTCTCCAACTGCCAGGACGGCCTCATCGACGTCATCGCCAAGTCCAC CGGCGTCACCATCTCCAACTGCCACCTCACCAACCACAACGATGTCATGCTCTTCTTCCA CGTGGTCAACAACGACTACACGCACTGGCTCATGTACGCCATCGGCGGCAGCAAGGCCCC CACCATCATCAGCCAGGGCAACCGCTACATCGCGCCGCCCAACCTTGCCGCGAAGCAGGT CACCAAGCAGCATGACACGCCGGAGTCGGTGTGGAAAAACTGGGTGTGGCACTCCGAGAA CGACCTCTTCATGGAAGGCGCCTACTTCACCGTCACCGGCGGCCAGATCAACAGGCAGTT CAACAAGAAGGACCTCATCAAGCCCAGGAACGGGTCCTACGTCACCAGGCTCACGCGCTA CGCCGGCTCCCTCGCCTGCACGCCCGGCAAGCCCTGCTAGATCAAGCCACCAGCGAGGAC GGCCGACGACCAGAGGCAGACCATGCATTCGCCGGCTCGCCATGTAAGAAACAGGGGAGT TGAAAGTGCGACACACCAGAGAACGTGTCTGTGTATACTGTGTAAAGGTCCTAAAGGAAA GAGAAGATGCAC