Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046372_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:9:84919504:84922831:-1 gene:Zm00001d046372 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyprotein
Sequence

ATGAAGAGTAAGAAAAGTGTGCACGGATCATCATGCAAGAAGGCTAAGTTGTTTGACGGC
CTAATTGGTAGACATGGTTCTGAAATAGATCCATGTTATAAACTTTTTCTTGAACATTTA
AGCAAAGATCGGAATACATATGTCCTTGATGTACCAAAGGGTGACCACGGCTTGCCTTTT
TCTGTACGTTATGAGGAGGACTATACGTCCTATGGAAATACTAAGAGCAGAAGTAGTCCA
AATTTTCCCAACCATTCACGGCGCACAAGTTGGGGCATTCCAGATGGCAAACAGCCTGAT
GTAAAAGCTGTCAAGGCTGCCAGCAGAAATATGTGTTGCTCCTTTTCACCAAAGAGATCA
TATGTGAAGAAGAAGACCACGACCTCACTAGTAGATGAATCTTATGAGTTATTTCTGAGC
CTTGTGAAGTTCAAGGATGGTTTCATGGTTATTGAACCAGAACCAGGTGTCACCATTGTA
TATGAGCGAGAAGAAGATATGCCAGCTGGCTATGATGAATGGAGAACTGGCAGTTCCACA
AATGAACTGTCTTTGGTGTCTCCACTTGAAAACACGGAGGGAGACTACACCATGCAAAGA
TATGATTATGGCCTTGCACCGGCTAACAAAATTTCTTCTGAACATGAAATGGCTGCACCT
TCTTCAGAGAACATTGCTGGTCAGGATATTATTTGCACAGATGAGCATGGCCTTGTACTT
TATGCTGAACCATCTGATTTAAATGCATGTGAAGATGAACAAGCAACACCTCTTGCTATC
AGCTACGGTGGTTCATCTACATTTGATGAAAAACTCAATGCTGTTTTAAGTCAACCATAT
GATCAAAACGAATACGAAGAGTTGTGGAGAAAAGCGACTGACCGGAAGCCTGTGAGCAGA
CAAAGACACTTGCGAAGTGCATCAAAGCGCTATGTTACAGAGGCAATCGGGCTGTCATAT
CTCGATTATTACCCTGGTATAGTTACAAAGCTTGGTAGGGGAACTTGTTTGTCCTAA

Peptide Sequence

PEP ID

Zm00001d046372_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:9:84919504:84922831:-1 gene:Zm00001d046372 transcript:Zm00001d046372_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyprotein
Sequence

MKSKKSVHGSSCKKAKLFDGLIGRHGSEIDPCYKLFLEHLSKDRNTYVLDVPKGDHGLPF
SVRYEEDYTSYGNTKSRSSPNFPNHSRRTSWGIPDGKQPDVKAVKAASRNMCCSFSPKRS
YVKKKTTTSLVDESYELFLSLVKFKDGFMVIEPEPGVTIVYEREEDMPAGYDEWRTGSST
NELSLVSPLENTEGDYTMQRYDYGLAPANKISSEHEMAAPSSENIAGQDIICTDEHGLVL
YAEPSDLNACEDEQATPLAISYGGSSTFDEKLNAVLSQPYDQNEYEELWRKATDRKPVSR
QRHLRSASKRYVTEAIGLSYLDYYPGIVTKLGRGTCLS

Transcript Sequence

Transcript ID

Zm00001d046372_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:84919504:84922831:-1 gene:Zm00001d046372 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyprotein
Sequence

ACTTCAGCACACATCACACAGAGGTAGTGCCTACCCGCACGGCCGCACGGCAGTTCGTCA
CCGTGGTGGCGTATCCGCCACAAGCCCACTGCCCACAGGCCCACTGCTGCCGTCTCGCCT
CAGGGCTCAGGCTGCAGGCTGACGACGCCAACGCCGCCCCTCCCGGCCTTGGCCCAAGTC
GTCACCTCCTCGCCCCTCGCCCACGGCTGCGGCCACATTGTCGCCGGCTTGCCAACACGC
CCGTGTAGATCGGCCGCCGCATCGCGCCACGCCGCCGTTTCGATCCCCCGCCAGGGCAGC
AGGCAGGAATCTGGCGATGAAGAGTAAGAAAAGTGTGCACGGATCATCATGCAAGAAGGC
TAAGTTGTTTGACGGCCTAATTGGTAGACATGGTTCTGAAATAGATCCATGTTATAAACT
TTTTCTTGAACATTTAAGCAAAGATCGGAATACATATGTCCTTGATGTACCAAAGGGTGA
CCACGGCTTGCCTTTTTCTGTACGTTATGAGGAGGACTATACGTCCTATGGAAATACTAA
GAGCAGAAGTAGTCCAAATTTTCCCAACCATTCACGGCGCACAAGTTGGGGCATTCCAGA
TGGCAAACAGCCTGATGTAAAAGCTGTCAAGGCTGCCAGCAGAAATATGTGTTGCTCCTT
TTCACCAAAGAGATCATATGTGAAGAAGAAGACCACGACCTCACTAGTAGATGAATCTTA
TGAGTTATTTCTGAGCCTTGTGAAGTTCAAGGATGGTTTCATGGTTATTGAACCAGAACC
AGGTGTCACCATTGTATATGAGCGAGAAGAAGATATGCCAGCTGGCTATGATGAATGGAG
AACTGGCAGTTCCACAAATGAACTGTCTTTGGTGTCTCCACTTGAAAACACGGAGGGAGA
CTACACCATGCAAAGATATGATTATGGCCTTGCACCGGCTAACAAAATTTCTTCTGAACA
TGAAATGGCTGCACCTTCTTCAGAGAACATTGCTGGTCAGGATATTATTTGCACAGATGA
GCATGGCCTTGTACTTTATGCTGAACCATCTGATTTAAATGCATGTGAAGATGAACAAGC
AACACCTCTTGCTATCAGCTACGGTGGTTCATCTACATTTGATGAAAAACTCAATGCTGT
TTTAAGTCAACCATATGATCAAAACGAATACGAAGAGTTGTGGAGAAAAGCGACTGACCG
GAAGCCTGTGAGCAGACAAAGACACTTGCGAAGTGCATCAAAGCGCTATGTTACAGAGGC
AATCGGGCTGTCATATCTCGATTATTACCCTGGTATAGTTACAAAGCTTGGTAGGGGAAC
TTGTTTGTCCTAACGTGTTAATTGAACACCTTTCTATCCATCTCCGGCCACTAATTCCTG
CTATTTGAATGAGTTGTAATAAGTAGTCTTAGTTTACAAAAGGAAAAGGCAGATTCCTGT
AATTTAACCAGGTGGTTAACAAGCATTTAGTAACCAATTGTTCATTTTCCAGTGAACTGC
ATCAGCCAAGTGACATATGCTTTCATCATATAACTCTTACCACAAAAGGAAACTCTAGAG
GCCTCAGTCTTTCCTCCATCATATGAATCCTTTCATCCATTTGAAAATGAACTAAGTCCC
ACAATAACATGATATATAGCAACCACAGAGAATATGACCTTGAACTTTTAGGTAGCTTTA
TCTTCGTCCTAGTTTTATTTACCATAGTGTTTTTATGGTATACATGTAATGGAGATACGA
GTGGCCTTTCTGCTCGCAACTGAGATCTAGATTTTTATATATGTGATGCCTTGGCTCATG
CATTTTGTAATGCATCATGTCATGATTCTATAGCAGTATTGAAGGCCATGCTTTCAATGT
TGTGATGCAGAACTTTGTATTAAGTTTCCACCAATGAAATAGATTGATAGATTTCATTTT
AGTACTTCTCCAGTTGATAGATTTCTTTTTAGTACTTCTCCATCTAGACTCATCTTTAGT
TAATCATGCAGATCTAGCCGTACAAATAAAGTCATCTGATCGTGATAAGAGACTGAGCCT
ACTACGAAGGTTCTTCTTCTGGTTGGAGGTGATCTAAGTTTACCATCCTTTTTTCAACTT
CCCAGTGCGTAAGGACTCTGCTGGTGAATTTGAAAATTAGTGCATCTGAAATTATTCACA
TGTGCTTTTCTTTTCGAGATAGCAAAATGCTGTGAAGAGATTTCACCCAATCAGTGAAAA
AATATGTTTCTTGCTGATGGCTACAGTGGTTTGAAAACAAATCGTCCATAATATGTTGGT
TTAGTGGTTTGCCTGCTTCATGGTGCTGTGTAAGGGAGGTCAGGAGGTGTGTGTGGTCAA
TGCCTCATTCTTTCAGATCTCTGGTGACTGACCCATGAATGCCTGGGCAGTAGGCAGAAC
CAAGTTAAAGAAAATGTGATATTCTCCATGCCTTTGGACTAAAGTTAAATTTATTCTCAT
TTTGTTCTGCAGAACTTGTGCCATGAGGGAGCCTACATGCCCTGGATCTCCAAACCTCTA
GCTTGCAACCCCATTTCACCGGATGGATGAATATGAACCGACGCCCACTCTCATCCTCAA
GACACACGAAGATGAGCCCTAGGGGTGAGCGGTTAGCAGAGATTTGCTTGCAGCATCCCT
GCATCTCTGATGCTACTTGACTGCTCCTTGTTTCGATGCGATGCAAAGCTGAGTCTGTAA
TCTTCAGTGTCTATGCAGTACTGCAGTTATTTTTCTGCAGGCTAAATTATACAACATGGC
AACAAATACAGCACGGATAT