Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046336_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:9:81443600:81455229:-1 gene:Zm00001d046336 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar proton pump2 description: vacuolar proton pump2
Sequence	ATGGGCCTGGTGAAGGAAGGCATCGACATGGAGGAGGGAACCCTTGAGATCGGCATGGAG TACAGGACTGTATCTGGTGTTGCTGGGCCTCTGGTCATATTGGATAAAGTAAAGGGCCCA AAGTACCAAGAAATTGTAAACATCCGACTTGGAGATGGCACCAATCGCCGTGGTCAAGTC CTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGGTCTTTGAAGGAACTTCTGGAATAGAC AACAAATACACAACCGTGCAGTTTACAGGCGAGGTTTTGAAAACTCCTGTCTCACTTGAT ATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTG CCCGAAGCCTACTTGGATATCTCTGGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCA GAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGA CAAAAGATTCCACTGTTTTCTGCTGCTGGGCTCCCTCACAATGAAATTGCTGCTCAGATT TGTCGTCAGGCTGGTCTTGTGAAGACATTGGAGAAAGGAAAGCATGCTGAGGGTGGTGAA GATGACAACTTTGCTATTGTGTTTGCTGCTATGGGAGTGAACATGGAAACAGCTCAATTC TTCAAACGTGATTTTGAAGAGAATGGTTCCATGGAGCGGGTCACCCTTTTTCTGAATCTG GCTAACGACCCCACCATTGAACGTATTATCACCCCTCGGATTGCTCTAACAACAGCGGAA TATTTGGCATATGAATGTGGGAAGCATGTACTTGTTATCTTGACAGATATGAGCTCTTAT GCAGATGCACTTCGTGAGGTTTCTGCAGCCCGAGAAGAGGTGCCAGGTAGGCGTGGTTAT CCTGGATATATGTATACTGATTTGGCAACAATATATGAGCGTGCTGGGCGTATTGAAGGA AGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGATAGCTTATCT GTGTTGATGTGA

Peptide Sequence

PEP ID	Zm00001d046336_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:9:81443600:81455229:-1 gene:Zm00001d046336 transcript:Zm00001d046336_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar proton pump2 description: vacuolar proton pump2
Sequence	MGLVKEGIDMEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTNRRGQV LEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPIL PEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQI CRQAGLVKTLEKGKHAEGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNL ANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGY PGYMYTDLATIYERAGRIEGRTGSITQIPILTMPNDDSLSVLM

Transcript Sequence

Transcript ID	Zm00001d046336_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:81443600:81455229:-1 gene:Zm00001d046336 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar proton pump2 description: vacuolar proton pump2
Sequence	AACTCCGCAGCGTAGCCTCTCCGCGGCGCGATCCAGATCCAGGTTTTTCAGCATGGGCCT GGTGAAGGAAGGCATCGACATGGAGGAGGGAACCCTTGAGATCGGCATGGAGTACAGGAC TGTATCTGGTGTTGCTGGGCCTCTGGTCATATTGGATAAAGTAAAGGGCCCAAAGTACCA AGAAATTGTAAACATCCGACTTGGAGATGGCACCAATCGCCGTGGTCAAGTCCTGGAAGT TGATGGCGAAAAAGCTGTTGTGCAGGTCTTTGAAGGAACTTCTGGAATAGACAACAAATA CACAACCGTGCAGTTTACAGGCGAGGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGG GCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGC CTACTTGGATATCTCTGGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGAT GATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAAGAT TCCACTGTTTTCTGCTGCTGGGCTCCCTCACAATGAAATTGCTGCTCAGATTTGTCGTCA GGCTGGTCTTGTGAAGACATTGGAGAAAGGAAAGCATGCTGAGGGTGGTGAAGATGACAA CTTTGCTATTGTGTTTGCTGCTATGGGAGTGAACATGGAAACAGCTCAATTCTTCAAACG TGATTTTGAAGAGAATGGTTCCATGGAGCGGGTCACCCTTTTTCTGAATCTGGCTAACGA CCCCACCATTGAACGTATTATCACCCCTCGGATTGCTCTAACAACAGCGGAATATTTGGC ATATGAATGTGGGAAGCATGTACTTGTTATCTTGACAGATATGAGCTCTTATGCAGATGC ACTTCGTGAGGTTTCTGCAGCCCGAGAAGAGGTGCCAGGTAGGCGTGGTTATCCTGGATA TATGTATACTGATTTGGCAACAATATATGAGCGTGCTGGGCGTATTGAAGGAAGAACAGG CTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGATAGCTTATCTGTGTTGAT GTGATGGCATTATATTCTTTCAGATTTATCCACCTATTAATGTCCTGCCATCTCTTTCAC GATTGATGAAGAGTGCTATTGGTGAGGGCATGACACGTCGAGACCATTCGGATGTATCTA ATCAGCTTTATGCCAACTATGCTATTGGAAAGGATGTTCAGGCCATGAAGGCTGTCGTTG GAGAGGAGGCACTCTCGTCTGAGGATCTGCTTTACTTAGAGTTCCTTGACAAGTTTGAGA GGAAGTTTGTGACACAAGGAGCATATGACACACGGAACATCTTCCAGTCACTCGATCTTG CATGGACATTGCTTCGGATCTTCCCTCGCGAACTTCTCCACCGTATTCCAGCAAAGACCT TGGACCAGTACTATAGCAGAGATGCTTCCCACTGAATCACTGATCGTTGATCAGTGTTCC AATATTTTGGCAAGTGCAGCTTTGAATAAATTGAACAGATTGGCCTCGTGGCCATTTTCC TGTATTTATCTGTAGTCAGGTCCAATTCTTTTCTGTTGGTGAGCGCAAGTTATTCATAGA TGACTCGGTCATGGGAATATTTGTAATATTATGTCATGTATCGTTAAATTTCAGTTGTTT TGTT