Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046330_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:80614913:80619992:1 gene:Zm00001d046330 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant L-ascorbate oxidase
Sequence

ATGGGCTGTGTTTCGGTGCAGTCTCTGCTGATCAACGGGAGAGGCCAGTTCAACTGCTCG
CTGGCCGCAGCGCACACGCAGGGGGCCACCAACACGCAGTGCGCCGCCACCGCCGCCAAC
ACGCAGTGCGCGCCGGTGGTACTCCCCGTGCAGCCTAACAAGACCTACAGGCTCAGGGTG
GCCAGCACCACCTCGCTCGCTTCTCTCAACCTCGCGATCGGGAATCACAAGCTGACGGTG
GTGGAGGCCGACGGCAACTACGTGGACCCATTCGTTGTGGACGACATCGACCTCTACTCC
GGCGACAGCTACTCTGTCCTGCTCACGACGGACCAGGACACGTCCTCGAACTACTGGGTC
AGCGTGGGCGTGCGCGGCCGGCTGCCCAAGACGGCGCCGGCGCTGGCAGTGCTCAACTAC
CGCCCCAACCGCGCGTCGGACCTGCCAGCCCTCGCGCCGCCGGTCACCCCGGCGTGGGAC
GACTACGGCCACAGCAAGGCGTTCACGTACAGGATCCGCGCGCGCGCCGGGACGCCCCCG
CCGCCGCCGACGGCGGCCCGCCGCATCGAGCTGCTCAACACGCAGAACCGGATGGACGGG
CGCATCAGGTGGTCCATCAACAACGTGTCCATGGTTCTGCCCGCCACGCCGTACCTGGGC
TCCCTGAAGATGGGGCTCAAGTCGACGCTGGCGGCGGCGCGCCCCGCGGAGACGTTCAGC
CGGGAATACGACGTGACGCTGCCGCCGCCGAACCCCAACACGACGGCGGGGGACAACGTG
TACGTCCTGGCGCACAACACCACCGTCGACGTGCTGCTCCAGAACGCCAACGCGCTGTCG
CGCAACGTCAGCGAGGTGCACCCGTGGCACCTCCACGGCCACGACTTCTGGGTGCTGGGC
TACGGCGACGGCGCGTACCGCGGGGACGCCGCCGACGAAGCGCGGCTCAACCTCCGGGAC
CCGCCGCTGCGGAACACGGCGGTCATCTTTCCGTACGGGTGGACGATGCTCCGGTTCGTG
GCGGACAACCCGGGCGTGTGGGCCTTCCACTGCCATATCGAGCCGCACCTCCACATGGGC
ATGGGCGTCATCTTCGCTGAGGCTGTCGACCTCGTCGCCAAGGTGCCCAACGAGGCTGTA
TCCTGTGGCGCCACGGCCACCGCGCTCATGGCCGGCGGTCACCTGTGA

Peptide Sequence

PEP ID

Zm00001d046330_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:80614913:80619992:1 gene:Zm00001d046330 transcript:Zm00001d046330_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant L-ascorbate oxidase
Sequence

MGCVSVQSLLINGRGQFNCSLAAAHTQGATNTQCAATAANTQCAPVVLPVQPNKTYRLRV
ASTTSLASLNLAIGNHKLTVVEADGNYVDPFVVDDIDLYSGDSYSVLLTTDQDTSSNYWV
SVGVRGRLPKTAPALAVLNYRPNRASDLPALAPPVTPAWDDYGHSKAFTYRIRARAGTPP
PPPTAARRIELLNTQNRMDGRIRWSINNVSMVLPATPYLGSLKMGLKSTLAAARPAETFS
REYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVLG
YGDGAYRGDAADEARLNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMG
MGVIFAEAVDLVAKVPNEAVSCGATATALMAGGHL

Transcript Sequence

Transcript ID

Zm00001d046330_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:80614913:80619992:1 gene:Zm00001d046330 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant L-ascorbate oxidase
Sequence

CCCCCAAGCGCTGCTCAGGTCATCTATCTCCCTCTTTGCCATCCGGCCCATCCCCAGCCT
GTGTTTGCATCCCATTTGCTTCCCCCCCTCTTGCCCATCCCCTGTGCTGTGCTGTGAACT
GCGGCCGGGGGCATCCTTGTTGGGGGGTGGCGTAGGAGGCTGCTGACACTACTGCAGAGC
AGGGCAGCCATGAGGCTTCCTCTCCCTCTGCTGGCCCTGGTGTGCTGCGCCCTGATGGCG
CGCCAGCATTGCGCTGCGGCGGGCAAGGCCCGGCACTTGAGGTGGGAGATCAGCAACATG
TTCTGGTCTCCCGACTGCGAGGAGAAGGTGGTGATCGGCATCAACGGGCAGTTCCCGGGC
CCGACGATCCGCGCCCGGGCCGGCGACACCGTCCACGTCCAGCTCAGGAACGCGCTCCAC
ACCGAGGGCGTCGTCATCCACTGGCACGGCATCCGACAGATCGGGACGCCGTGGGCGGAC
GGCACGGCGGCGATCTCCCAGTGCGCCATCAACCCCGAGGAAACCTTCACCTACCGCTTC
GTCGTCGACAAGCCGGGGACGTACTTCTACCACGGGCACTACGGGATGCAGAGGGCGGCG
GGGCTGTACGGGTCGCTGGTCGTGGACGTGGCGGAGGGGGAGGAGGAGCCGTTCCAGTAC
GACGGCGAGCTCAACCTGCTGCTCAGCGACTGGTACCACGAGAGCATCCACACCCAGATG
GTCGCCCTCTCGTCCAGGCCCTTCAGGTGGATCGGCGAGCCACAGGTACCACCAATACTA
CCATGCATGATCTCTCTGGTTATCGTCATAAGCTTCATCTCCGTTCCTGTCATGACTGCA
GTTCACTAGCTGCATCTCTGTTTGATTTGATTTCGACAGCAATTTGTGAAACACTGTAGC
TTTCTGAAAGGGCAGTTTGAGAAAACACACACATGCAGCATGCAACTGATATATGAAGCA
TTGCATCAAGTAGGTTTACAAAATGACATTGCAAAACACAGATGTAATTCAGTTGCACTC
TAGCTTATTGTCAGGTCAAAATCAGGTTCTGACCAAGGTGCCTTTTGCACTGATCCTGGA
ACGGACATTGCAGAAGGAGATTACAAAATTAATTCCTTTGAGGAAACATAACACGTTACA
TGATACTCCTAATTTGCAATAATGACGCTTACCACTGGGCCGCTTCAATTATTGTGCCTT
GACGTAGTACTAGTGTGTCGAGAAAAGTACAAGTCATGGCCTGGATTTGCTTGCTCTCAA
GATTTCTTTAGCTCGTTCACATGCATATCGTGGCAAGCCGAGGGAACAAGTAGTCGTAGA
TGCAAGCTGTCCGCTCGCTTCCTTGTACACTCACTCGGTTTCCTCTTTGATCAACCACGG
AAAGAGACGCTGCGTGTCCAACAGTTTAGGTATATGGTCACTACAATTTTGCACTGCCAT
CTGTATTGTTCGTAGAGTGAAATCTGAATTTAGGTACGAGGATGAGTAAGCTGCTATGTG
ATAATGTACGATGGTGCACCTCCATTATTGGGCCCGGCATATATACCGATATCTAGAAAT
TAGAACAGTGTGCAAACACAAGGCATGGCTGAATTTGCCTAGCTTGCCTCTGGCAAGATC
TCTCAAAGTCCTCCTCGCTGGATACTTGCTTGGCCACGAGTACAGGACAAATGCCGGTCC
ATTCCCTTGCCTGGCCATTTGCTGAAACAGTTAAAAAAAATCTCGAATTCTGACAGTGAT
AAGACTATCTGTATCCCTCATCTATATCAATTATTTATAGATTTCTCTAAAATATTTTAT
TCTTTATTTCTCATTTCTCTTTAATATTATCATATATATACCTTGCTCCCTATACATCAA
AGGTCTGTATAAATGACGTTTTGTACTTAGGATTTTTTATGCGTACCTATCTGACATTTC
GTCAAATTTCTTTCACCTATTTTAATTTTCTTCAATTTATTATCTATTGTATAAAAAAAT
AGACACAGAAGATGAACAAATAGTTTTTATATACGGAGGACGAAAGAGTATCCTCTGTGT
TTGTAGGAGGATTTAGAAAAAACATCATTAAAGAAGAGAATATGTGTATTTAAGGTAGAA
ATGGGACTACGATCTCGTAGACAGTCCATAGTATGGAGACAAGGCACAACAGTTCACATA
CCTAGCTTTCCCAACTAGTATACCAAAAAGCTGATCGCGCAGGCAGTGTGGTCCCACCGC
TCAGAAAGGCAAAAGATGGAGCCCAAACAGTCCTGGTTTCATGGAAAGAAAGTTTTACCC
TACCCCACTCACTTGAGAAAGCGCATCAAGTGTAGGGCACTTTGGACACAAGGCCAGCAG
CATGTGTGTACCAAAAAAAATGGTTGAGTAGATCATGGGCATGCATGCTAGTCTAATGCC
CGAAATATGGGCCGGGCTTTTTGACAGCAATAGCACAGGCTAAAAATAGAAGCCCAAAGC
ACATGCGGACATATCGCGCGCACAAATAAAAGGTGTTTCAATACACTAGAAATAATAGTT
AGTTAGTTAAAATTGTTAGTGGAATTAGATAGCTAACAAATAGCTACATAACTATTAACT
AATTTATCAAAAATGAATTATTAACTAAGGTGTTTGGATGTCTCAACGAATTGTAGCCAC
TAACTATTAGCTCTAGTGCATTCAAATACTCCTAGCACGGCCTAATAAAACTCATATTAC
TTAATTTCTTTAATTTATAATTTTGTAAGTTATAGATTTTACATGTTTGTAATATTTAAA
CTTTATGTTGTAAAAGTGTGCTTCACATTGTTTAAGAAGAAAAAGTTGGGTGTCGTAGCA
TGCAATGTGCACACACAGAAAAAGTTGGGTGTCGTAGCCATCACCGTCGTGCCTACAAAG
CATGGCAGGGGCCACATGATCTTTGAGGGAGGAGAGGACACCCTCCCGCTGTCACGTCGT
GGCGGTGCAGCAGAGCGCCAGAGAGACTTGAGCGTCCATGCAGATGCAGGCGACTTTCTC
AGTAACATGTCTGCGGCAGAGGCATGATGCCACTGCCCATTGCCCCATTCCCATTGGGAC
GGACGGAAGCGCAGAGAAAAAGGTCAAACCGGCACGACTGCATTATCACATTGGCGGCGG
CGTGCATGGTCCTGCCCCTCTTGTTGCCTTGTCCTGTGCACATGTACTGCGCTCCGATGC
TGTGCATGTACTCGACTTTGGAGCTTCGCGACTCCCGAAACTATGGTGTTTCAGTGCTGG
TTTGCGGACACTGAATTTTGCTGGATTCAGTTTGTTCTGGTCTGAATTCTGGTGCCAAAC
CGAGTCTGAATTTGGCTACATTCAATTTGTCTGAATCATGGGCTGTGTTTCGGTGCAGTC
TCTGCTGATCAACGGGAGAGGCCAGTTCAACTGCTCGCTGGCCGCAGCGCACACGCAGGG
GGCCACCAACACGCAGTGCGCCGCCACCGCCGCCAACACGCAGTGCGCGCCGGTGGTACT
CCCCGTGCAGCCTAACAAGACCTACAGGCTCAGGGTGGCCAGCACCACCTCGCTCGCTTC
TCTCAACCTCGCGATCGGGAATCACAAGCTGACGGTGGTGGAGGCCGACGGCAACTACGT
GGACCCATTCGTTGTGGACGACATCGACCTCTACTCCGGCGACAGCTACTCTGTCCTGCT
CACGACGGACCAGGACACGTCCTCGAACTACTGGGTCAGCGTGGGCGTGCGCGGCCGGCT
GCCCAAGACGGCGCCGGCGCTGGCAGTGCTCAACTACCGCCCCAACCGCGCGTCGGACCT
GCCAGCCCTCGCGCCGCCGGTCACCCCGGCGTGGGACGACTACGGCCACAGCAAGGCGTT
CACGTACAGGATCCGCGCGCGCGCCGGGACGCCCCCGCCGCCGCCGACGGCGGCCCGCCG
CATCGAGCTGCTCAACACGCAGAACCGGATGGACGGGCGCATCAGGTGGTCCATCAACAA
CGTGTCCATGGTTCTGCCCGCCACGCCGTACCTGGGCTCCCTGAAGATGGGGCTCAAGTC
GACGCTGGCGGCGGCGCGCCCCGCGGAGACGTTCAGCCGGGAATACGACGTGACGCTGCC
GCCGCCGAACCCCAACACGACGGCGGGGGACAACGTGTACGTCCTGGCGCACAACACCAC
CGTCGACGTGCTGCTCCAGAACGCCAACGCGCTGTCGCGCAACGTCAGCGAGGTGCACCC
GTGGCACCTCCACGGCCACGACTTCTGGGTGCTGGGCTACGGCGACGGCGCGTACCGCGG
GGACGCCGCCGACGAAGCGCGGCTCAACCTCCGGGACCCGCCGCTGCGGAACACGGCGGT
CATCTTTCCGTACGGGTGGACGATGCTCCGGTTCGTGGCGGACAACCCGGGCGTGTGGGC
CTTCCACTGCCATATCGAGCCGCACCTCCACATGGGCATGGGCGTCATCTTCGCTGAGGC
TGTCGACCTCGTCGCCAAGGTGCCCAACGAGGCTGTATCCTGTGGCGCCACGGCCACCGC
GCTCATGGCCGGCGGTCACCTGTGATTGCCATCAAATATTGGTGGCCAGGCTAGGGAACC
GCGCGCCTTGCCTCGCGCGCATGCATATTAATGCCCTTCTGTCGTACGAGATCTCTGGTC
ATTAATTAGTGTTATTTATTAATATTTCTTCTATCTTTTTTTCCGTTTATTGAGACGTGA
ACCTAGAGTGTTTGTGCTTGGCTAACCATCCCATCTTAGATAGGTTGTTGCATCGTAAGC
CAATTCCTTAAATTAATGAAAATGCCTTTTTC