Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046322_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:80350815:80352410:1 gene:Zm00001d046322 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative FAD-binding Berberine family protein
Sequence	ATGCCCGGAATTTTGTACCAGCTCGTCGTCGCCGCCGCCATCTGCGCCCTCTCCAGCGGC AGCATCGCGGTCGCCTCAGGTTTGAATGCGACCGACTCGTTCCTCGTCTGCCTCGTCGGC GCGGGCGTCCCGCCGCGCCTCCTTCAGACCCCGGCGTCCCCGTCGTACTCCACGACGCTG CTCTCCTCCGTACGCAACCTCCGCTACGTCACGTCGGACATTCAGCGGCCGGTCGCCATC GTGGCCGCCACCGAGCCAGCCCACGCGCAGGCGGCCGTACGCTGCGGCCGCCGCCACGGC GTCCGCGTCCGCGCCCGAAGCGGCGGGCACGACTACGAGGGCCTATCCTACGCCTCCCTC GACCCCGGCGAGCGCTTCGCCGTGCTCGACCTCGCCGCTTTCCGTGACGTCCGCGTCGAC TCCGCGCGCGCCGAGGCGTGGGCTGGATCGGGGGCCACGCTCGGCGAGGTCTACTATGCC GTCGCCGCCGCCAGCCGCGTGCTCGCGTTCCCCGCTGGGATCTGCCCCACTGTCGGCGTA GGAGGACACCTCAGCGGCGGCGGCTTCGGCACGCTGATGCGCAGGTACGGCCTCGCTGCG GACAACGTCATTGACGCCGTCCTCGTTGACGCCGACGGGAGGCTGCTGAACCGGACCACC ATGGGGGAGGACCTGTTCTGGGCCATCCGCGGTGGCGGCGGGGAGAGCTTCGGTGTCGTA CTGTCTTGGAAGCTCCGCCTCGTGCGCGTGCCGGAGACAGTCACCGTGTTCACCGTGCGC CGGTCAATAAACCAGTCCGCCTCGCACCTCATCACCAAATGGCAGGCAATCGCGCCGGCG CTGCCCAGTGACCTCATCCTCCGAGTCGCCGTCCGGAGCCAGCACGCGCGGTTTGAGGCA CTGTTCCTCGGCCGCTGCAGCCGCCTCCTTGAGCACATGCGAGTTCACTTCCCCGACCTT GGCGTCACCCAATCGGACTGCGAGGAGATAAGCTGGATCCAGTCCACCGTGTACTTCGCC TTCTACTCGAGCTCCAAGCCACTGGAGCTGCTCCTGGACAGGAGCGGCGAGACGCCCAGA TACGTCAAGGCCAAGTCCGACTACGTGCAAGAACCCATCCCACGGCACGTGTGGGAGAGA ACATGGTCATGGCTGGAGAAGCCCGAGGCCGGGCTGCTCATCCTGGACCCCTACGGCGGC CGGATGGGCAGCATCTCTCCGTCAGCGACGCCGTTCCCGCACCGGAAGGGGAACCTGTAC AACCTCCAGTACTACTCGTATTGGTTCGAGAATGGCACTGCGGCATTGGAGAAGCGGATG AGCTGGGTCAGGGGGCTGTACGAGGAGATGGAGCCGTATGTGTCCAAGAACCCAAGAACT GGATATGTCAACTACAGGGACCTGGATCTTGGGACGAACGAGTTGGAGGACAATGTGACT AGCTACGCCAGGGCGAGGATCTGGGGGGAGAAGTATTTCAAAGGCAATTTTGAGAGGCTG GCAGCTGTGAAGGCCATGGCGGATCCTAATGACTTCTTCAGGAATGAGCAGAGCATCCCT CCTCTTCCCGCTGCAAAAGGATGGGGCTCCATTTGA

Peptide Sequence

PEP ID	Zm00001d046322_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:80350815:80352410:1 gene:Zm00001d046322 transcript:Zm00001d046322_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative FAD-binding Berberine family protein
Sequence	MPGILYQLVVAAAICALSSGSIAVASGLNATDSFLVCLVGAGVPPRLLQTPASPSYSTTL LSSVRNLRYVTSDIQRPVAIVAATEPAHAQAAVRCGRRHGVRVRARSGGHDYEGLSYASL DPGERFAVLDLAAFRDVRVDSARAEAWAGSGATLGEVYYAVAAASRVLAFPAGICPTVGV GGHLSGGGFGTLMRRYGLAADNVIDAVLVDADGRLLNRTTMGEDLFWAIRGGGGESFGVV LSWKLRLVRVPETVTVFTVRRSINQSASHLITKWQAIAPALPSDLILRVAVRSQHARFEA LFLGRCSRLLEHMRVHFPDLGVTQSDCEEISWIQSTVYFAFYSSSKPLELLLDRSGETPR YVKAKSDYVQEPIPRHVWERTWSWLEKPEAGLLILDPYGGRMGSISPSATPFPHRKGNLY NLQYYSYWFENGTAALEKRMSWVRGLYEEMEPYVSKNPRTGYVNYRDLDLGTNELEDNVT SYARARIWGEKYFKGNFERLAAVKAMADPNDFFRNEQSIPPLPAAKGWGSI

Transcript Sequence

Transcript ID	Zm00001d046322_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:80350815:80352410:1 gene:Zm00001d046322 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative FAD-binding Berberine family protein
Sequence	ATGCCCGGAATTTTGTACCAGCTCGTCGTCGCCGCCGCCATCTGCGCCCTCTCCAGCGGC AGCATCGCGGTCGCCTCAGGTTTGAATGCGACCGACTCGTTCCTCGTCTGCCTCGTCGGC GCGGGCGTCCCGCCGCGCCTCCTTCAGACCCCGGCGTCCCCGTCGTACTCCACGACGCTG CTCTCCTCCGTACGCAACCTCCGCTACGTCACGTCGGACATTCAGCGGCCGGTCGCCATC GTGGCCGCCACCGAGCCAGCCCACGCGCAGGCGGCCGTACGCTGCGGCCGCCGCCACGGC GTCCGCGTCCGCGCCCGAAGCGGCGGGCACGACTACGAGGGCCTATCCTACGCCTCCCTC GACCCCGGCGAGCGCTTCGCCGTGCTCGACCTCGCCGCTTTCCGTGACGTCCGCGTCGAC TCCGCGCGCGCCGAGGCGTGGGCTGGATCGGGGGCCACGCTCGGCGAGGTCTACTATGCC GTCGCCGCCGCCAGCCGCGTGCTCGCGTTCCCCGCTGGGATCTGCCCCACTGTCGGCGTA GGAGGACACCTCAGCGGCGGCGGCTTCGGCACGCTGATGCGCAGGTACGGCCTCGCTGCG GACAACGTCATTGACGCCGTCCTCGTTGACGCCGACGGGAGGCTGCTGAACCGGACCACC ATGGGGGAGGACCTGTTCTGGGCCATCCGCGGTGGCGGCGGGGAGAGCTTCGGTGTCGTA CTGTCTTGGAAGCTCCGCCTCGTGCGCGTGCCGGAGACAGTCACCGTGTTCACCGTGCGC CGGTCAATAAACCAGTCCGCCTCGCACCTCATCACCAAATGGCAGGCAATCGCGCCGGCG CTGCCCAGTGACCTCATCCTCCGAGTCGCCGTCCGGAGCCAGCACGCGCGGTTTGAGGCA CTGTTCCTCGGCCGCTGCAGCCGCCTCCTTGAGCACATGCGAGTTCACTTCCCCGACCTT GGCGTCACCCAATCGGACTGCGAGGAGATAAGCTGGATCCAGTCCACCGTGTACTTCGCC TTCTACTCGAGCTCCAAGCCACTGGAGCTGCTCCTGGACAGGAGCGGCGAGACGCCCAGA TACGTCAAGGCCAAGTCCGACTACGTGCAAGAACCCATCCCACGGCACGTGTGGGAGAGA ACATGGTCATGGCTGGAGAAGCCCGAGGCCGGGCTGCTCATCCTGGACCCCTACGGCGGC CGGATGGGCAGCATCTCTCCGTCAGCGACGCCGTTCCCGCACCGGAAGGGGAACCTGTAC AACCTCCAGTACTACTCGTATTGGTTCGAGAATGGCACTGCGGCATTGGAGAAGCGGATG AGCTGGGTCAGGGGGCTGTACGAGGAGATGGAGCCGTATGTGTCCAAGAACCCAAGAACT GGATATGTCAACTACAGGGACCTGGATCTTGGGACGAACGAGTTGGAGGACAATGTGACT AGCTACGCCAGGGCGAGGATCTGGGGGGAGAAGTATTTCAAAGGCAATTTTGAGAGGCTG GCAGCTGTGAAGGCCATGGCGGATCCTAATGACTTCTTCAGGAATGAGCAGAGCATCCCT CCTCTTCCCGCTGCAAAAGGATGGGGCTCCATTTGA