Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046299_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:79124493:79126324:1 gene:Zm00001d046299 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 28 description:HSF28 HSF type transcription factor

Sequence

ATGGCGGCGGGCGGCGGAGGCGGCTCGCCGGCGCCGTTCGTGTGGAAGACGTACACGATG
GTGGAGGACCCCGGGACGGCAGGGGTGATCGGCTGGGGCAGCGGCAACAACAGCTTCGTC
GTCGCCGACCCCTTCGTCTTCTCGCAGACGCTGCTCCCCGCGCACTTCAAGCACAACAAC
TTCTCCAGCTTCGTCCGCCAGCTCAACACCTATGGCTTCCGCAAGGTTGATCCGGACCGG
TGGGAGTTCGCCCACGCGTCGTTCCTGCGCGGCCAGACGCACCTCCTGCGCAACATCGTC
CGCCGCGGCAGCAGCGCCGCCGGTGCCGGAGGCGGAAAGAGGAAGGACGCCAGCCCCACG
GAGCTGGCCTCCGGGGACGACATGACCATGGTGGCCACGGAGGTGGTGCGCCTCAAGCAA
GAGCAGCGCGCCATCGACGACCGCGTCGCCTCCATGTGGCGCCGCGTGCAGGAGACGGAG
CGCAGGCCCAAGCAGATGCTCGCGTTCCTCCTCAAGGTCGTCGGCGACCGCGACAGGCTG
CACCGCCTCGTCGGCGACGCCCCCGTGCCAGATAACGGGTTCGCCTCCGGCGGTGCCGCC
GAGCCGCCCGCCGCGGAGGTCGGCGAGAAGCGGGCCAGGCTGCTGCTCGACGGTGACAGC
ATGGTGGCGCTCGGTCCCGAGGCCGTCGACTTCGCCGGGTTCTACAGCGGCGGCGGTGCG
TTCGGCGATGTTGCCGTGGATGCTGCCGCTGGGTCCCGCGGAGGCGGGTTCTCGTTTGCG
TTCGGCGTGGACGCGGGGTACTGA

Peptide Sequence

PEP ID

Zm00001d046299_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:79124493:79126324:1 gene:Zm00001d046299 transcript:Zm00001d046299_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 28 description:HSF28 HSF type transcription factor

Sequence

MAAGGGGGSPAPFVWKTYTMVEDPGTAGVIGWGSGNNSFVVADPFVFSQTLLPAHFKHNN
FSSFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHLLRNIVRRGSSAAGAGGGKRKDASPT
ELASGDDMTMVATEVVRLKQEQRAIDDRVASMWRRVQETERRPKQMLAFLLKVVGDRDRL
HRLVGDAPVPDNGFASGGAAEPPAAEVGEKRARLLLDGDSMVALGPEAVDFAGFYSGGGA
FGDVAVDAAAGSRGGGFSFAFGVDAGY

Transcript Sequence

Transcript ID

Zm00001d046299_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:79124493:79126324:1 gene:Zm00001d046299 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 28 description:HSF28 HSF type transcription factor

Sequence

CACCAACGACAGGTTACCTTCTTCGGGCCCTTCTCACCATTTCCTCATTTAAGCCCCGTG
TGCCTTGCTCCTCGGTGTTTCCTCCAGATAGTAGTGTTTCCTCAGTGGACTAGTGTGAAG
CTGTGCTTAGCGTAGCGGAAGGGAGGAAGGACAAGGCAAGGCAACTGATGGCGGCGGGCG
GCGGAGGCGGCTCGCCGGCGCCGTTCGTGTGGAAGACGTACACGATGGTGGAGGACCCCG
GGACGGCAGGGGTGATCGGCTGGGGCAGCGGCAACAACAGCTTCGTCGTCGCCGACCCCT
TCGTCTTCTCGCAGACGCTGCTCCCCGCGCACTTCAAGCACAACAACTTCTCCAGCTTCG
TCCGCCAGCTCAACACCTATGGCTTCCGCAAGGTTGATCCGGACCGGTGGGAGTTCGCCC
ACGCGTCGTTCCTGCGCGGCCAGACGCACCTCCTGCGCAACATCGTCCGCCGCGGCAGCA
GCGCCGCCGGTGCCGGAGGCGGAAAGAGGAAGGACGCCAGCCCCACGGAGCTGGCCTCCG
GGGACGACATGACCATGGTGGCCACGGAGGTGGTGCGCCTCAAGCAAGAGCAGCGCGCCA
TCGACGACCGCGTCGCCTCCATGTGGCGCCGCGTGCAGGAGACGGAGCGCAGGCCCAAGC
AGATGCTCGCGTTCCTCCTCAAGGTCGTCGGCGACCGCGACAGGCTGCACCGCCTCGTCG
GCGACGCCCCCGTGCCAGATAACGGGTTCGCCTCCGGCGGTGCCGCCGAGCCGCCCGCCG
CGGAGGTCGGCGAGAAGCGGGCCAGGCTGCTGCTCGACGGTGACAGCATGGTGGCGCTCG
GTCCCGAGGCCGTCGACTTCGCCGGGTTCTACAGCGGCGGCGGTGCGTTCGGCGATGTTG
CCGTGGATGCTGCCGCTGGGTCCCGCGGAGGCGGGTTCTCGTTTGCGTTCGGCGTGGACG
CGGGGTACTGAATGACGAGCAGGCGCCGCCATTGTCAGCAGCTTGGCCCGCTTATGCTGC
TGTCGAGCTTCCTGCCAATGCCATTGCGCTGAGCGGCGGCAGCCGTCACATGGAAGCATG
GCAGGGGATGGATGATAATGATGTTAAGTTCTATCCCTGCTACATGGATAGGATGTGTGT
CTGATGCTGCTTTTCGTGGATCTATATGGGCGGGGAGCGACTACTGCGTCGAGATCTAAA
AATAAGGGGATATACTGTCATGGAGTGTGACCTTCGAAGTTCCCAATATGAGTAGGTTTG
ATGTTGTACATGACCAGTGCAGCAGCACTAATATTTCAATCTCCTGCGGATACGCAGCTG
GAAAATTGGCATCGCTATTATTTAGCCCTTTTCTAA