Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046262_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:77157097:77159734:-1 gene:Zm00001d046262 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isocitrate dehydrogenase

Sequence

ATGACTGAAGTTTCATTCAACTGGATTGGATTCTGGAGTGCCATGACTTCGAATCTTATG
AATCAATCGCGGAATGTTTACAGCAAGAAAATTCTCGCCGATAAAGAGCTCCTGCCGCGG
ATAGCATCACTTCCATTGAATTTCGTGCAGCTTATATTCCCTTTCGTAGACCTCGACATC
AAATATTTTGACCTCGGGCTTCCACACCGTGATGCTACCGACGACAAAGTCACAGTGGAG
GCTGCGGAGGCCACACTCAAGTACAATGTGGCTATCAAGTGTGCCACCATTACACCAGAT
GAAGCAAGGGTAAAGGAGTTTGGCTTGAAGGCTATGTGGAAGAGCCCAAATGGCACAATT
AGGAATATTCTGAATGGCAATGTGTTCAGAGAACCAATCATCTGCAGAAACATCCCACAG
CTTGTTCCAGGGTGGACAAAGCCCATTTGCATCGGGAGGCATGCATTCGGCGATCAGTAC
CGGGCAACTGATGCAGTTATCAAGGGGCCAGGGAAGCTTAAATTAGTTTTTGAGGGAAAA
GAAGAGCAAGTTGAGCTAGAGGTGTTCAACTTCACTGGTGCAGGAGGAGTTGCCTTATCA
ATGTACAACACTGACGAGTCCATCCATGCCTTTGCTGACGCTTCTATGGCCACTGCTTAT
GAAAAGAAATGGCCATTGTATCTTAGCACCAAAAACAATATTTTGAAGAAATATGATGGC
ATGTTCAAGGACATTTTCCAGGAGGTGTATGAAGCTGGTTGGAAACCAAATTTGAAGCTG
CCGGCATATGGTATAGTTTCAAATCCCGTTTCATATCCCATCTTTTTCTTTAATAAGGTG
TTTTGGCTCATTGGGTTTGATGACTTCGGTACTGGTAACTGTCAGTTCTCCAAGTGA

Peptide Sequence

PEP ID

Zm00001d046262_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:77157097:77159734:-1 gene:Zm00001d046262 transcript:Zm00001d046262_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isocitrate dehydrogenase

Sequence

MTEVSFNWIGFWSAMTSNLMNQSRNVYSKKILADKELLPRIASLPLNFVQLIFPFVDLDI
KYFDLGLPHRDATDDKVTVEAAEATLKYNVAIKCATITPDEARVKEFGLKAMWKSPNGTI
RNILNGNVFREPIICRNIPQLVPGWTKPICIGRHAFGDQYRATDAVIKGPGKLKLVFEGK
EEQVELEVFNFTGAGGVALSMYNTDESIHAFADASMATAYEKKWPLYLSTKNNILKKYDG
MFKDIFQEVYEAGWKPNLKLPAYGIVSNPVSYPIFFFNKVFWLIGFDDFGTGNCQFSK

Transcript Sequence

Transcript ID

Zm00001d046262_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:77157097:77159734:-1 gene:Zm00001d046262 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isocitrate dehydrogenase

Sequence

GGAATCCTTCATATAAACATCTGTTTCTGTATTCTGTCTCTACAGACACCTTCTCTACCA
GTGTTGGGTTCTCTTGTCCCTATTGTTGGTGGAGTTGTATTGGCGTCGATGACTGAAGTT
TCATTCAACTGGATTGGATTCTGGAGTGCCATGACTTCGAATCTTATGAATCAATCGCGG
AATGTTTACAGCAAGAAAATTCTCGCCGATAAAGAGCTCCTGCCGCGGATAGCATCACTT
CCATTGAATTTCGTGCAGCTTATATTCCCTTTCGTAGACCTCGACATCAAATATTTTGAC
CTCGGGCTTCCACACCGTGATGCTACCGACGACAAAGTCACAGTGGAGGCTGCGGAGGCC
ACACTCAAGTACAATGTGGCTATCAAGTGTGCCACCATTACACCAGATGAAGCAAGGGTA
AAGGAGTTTGGCTTGAAGGCTATGTGGAAGAGCCCAAATGGCACAATTAGGAATATTCTG
AATGGCAATGTGTTCAGAGAACCAATCATCTGCAGAAACATCCCACAGCTTGTTCCAGGG
TGGACAAAGCCCATTTGCATCGGGAGGCATGCATTCGGCGATCAGTACCGGGCAACTGAT
GCAGTTATCAAGGGGCCAGGGAAGCTTAAATTAGTTTTTGAGGGAAAAGAAGAGCAAGTT
GAGCTAGAGGTGTTCAACTTCACTGGTGCAGGAGGAGTTGCCTTATCAATGTACAACACT
GACGAGTCCATCCATGCCTTTGCTGACGCTTCTATGGCCACTGCTTATGAAAAGAAATGG
CCATTGTATCTTAGCACCAAAAACAATATTTTGAAGAAATATGATGGCATGTTCAAGGAC
ATTTTCCAGGAGGTGTATGAAGCTGGTTGGAAACCAAATTTGAAGCTGCCGGCATATGGT
ATAGTTTCAAATCCCGTTTCATATCCCATCTTTTTCTTTAATAAGGTGTTTTGGCTCATT
GGGTTTGATGACTTCGGTACTGGTAACTGTCAGTTCTCCAAGTGA