Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046194_T038
CDS Infomation	cds chromosome:B73_RefGen_v4:9:71335515:71350354:-1 gene:Zm00001d046194 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable phospholipid-transporting ATPase 7
Sequence	ATGGGCCGTTCCGGCCGCCGCAGGCGGGACCGCATGCGGTGGAGCAATCTCTACACCTTC TCCTGCTTTCGCGCCCAGCACGAGCACGCCGGCGATGCGGGCCCCTCCTCCGACGGGGCT GGCGCCGTCGGCGGGCCGGGCTTCTCGCGCGTCGTGTACTGCAACAACGCCGCCCTGCAG AAGCCGCTCAAGTACATCACCAACTACATCACCACCACCAAGTACAACGTCGTCACCTTC TTCCCCAAGGCCATCTTCGAGCAGTTCCGACGCGTTGCCAACCTCTACTTCCTCCTCACC GCCATCCTCTCTCTCACCCCGGTGTGCCCCTTCTCTGCCGTCAGCATGATTGCTCCGCTG GCATTTGTCGTTGGCCTCAGCATGATGAAGGAGGGGTTGGAGGACTGGCGCCGCTTCATG CAGGACATGAAGGTGAACAACCGCAATGTCAGCGTGCACAAGAGTGATGGCGAATTCGAC TACCGGCACTGGGAGGACCTTTGCGTAGGCGATGTGGTCAGGGTTGAGAAGGACCAGTTC TTCCCTGCTGATTTACTGCTACTGTCCTCAAGCTATGAGGATGGCATTTGCTATGTCGAG ACAATGAACCTCGATGGCGAGACAAACCTTAAGGTGAAGAGGTCACTTGAGGTTACGCTG CCGTTGGAAGAAGACGAGTCCTTTAAAGATTTCCAGGCAGTGATACGCTGTGAGGATCCC AACCCGAGCTTGTACACATTCACTGGTAACTTTGAGTATGAGAGGCAGGTTTACGCCCTT GATCCGTCTCAGATACTTCTGCGGGACTCAAAACTAAGGAATACAGCCTTTGTCTATGGA GTGGTCATTTTTACCGGTCATGACAGTAAAGTCATGCAGAACTCAACTGAGTCGCCATCC AAGAGGAGCAGGATTGAGAGGAAGATGGATTTGATCATATACATCCTGTTTACTGTGCTC GTGTTGATATCACTCATTAGTTCAATTGGATTTGCTGTGAGGATCAAGTTAGATTTGCCC CGCTGGTGGTACTTGCAGCCACAGAAAAGCAATAAGTTAGATGATCCATCACGCCCTGCT CTTTCTGGGATATTCCATCTAATCACGGCTCTCATTCTTTATGGGTATCTGATTCCAATC TCGTTGTATGTCTCGATTGAACTGGTGAAGGTATTGCAAGCACATTTCATTAACCAGGAT ATTCATATGTTTGACGAGGAGACTGGCAATACCGCTCAGGCGCGTACATCAAACTTGAAT GAGGAACTTGGCCAAGTTCATACAATCTTGTCTGATAAAACTGGTACACTGACCTGCAAT CAGATGGATTTCCTGAAGTGTTCAATTGCTGGAGTATCATACGGCGTGGGTTCAAGTGAA GTTGAACTTGCTGCTGCAAAGCAGATGGCGTCAGGTGCTGATGACCAGGATATCCCTATA CAAGATATATGGGAAGAGAACAATGAGGATCAAATCGAGTTGGTAGAAGGAGTTACCTTT AGTGTTGGCAACAACCGAAAGCCCTCCATAAAAGGCTTCAGTTTTGAGGATGACCGTCTC ATGCAAGGGAACTGGACCAAGGAACCAAATTCTTCCACAATTCTACTCTTCTTCAGGATA CTTGCTCTGTGTCACACAGCGATACCAGAGATAAATGAAGCAACTGGTTCTATTGCCTAT GAAGCAGAATCACCTGATGAGGGGGCTTTTCTCGTGGCAGCCAGGGAATTTGGATTTGAA TTTTTCAAACGAACACAATCAAGTGTCTTTGTCAGGGAGAAACACACTTCTTCGAAAGGC ACAATTGAGAGGGAGTTCAAGATTCTCAATCTATTGGAATTCAATAGCAAAAGAAAACGA ATGACTGTAATTCTGCAGGATGAAGATGGTCAAATTCTTCTTTTGTGCAAAGGAGCAGAC AGCATCATATTTGATAGATTGGCAAAAAATGGAAGGATGTATGAAGTTGATACAACTAAG CACCTGAATGAATATGGTGAGGCAGGCTTGCGAACATTGGCACTATCGTACAGGGTGCTT GATGAATCAGAATATTCTTCTTGGAATGCTGAGTTTCTTAAAGCAAAGACCTCTATTGGG CCTGATAGAGAGTTGCAACTTGAACGTGTCTCTGAGTTGATTGAAAGAGAGCTGATCCTT GTTGGTGCAACTGCTGTAGAGGACAAATTACAAAAAGGGGTTCCTCAGTGCATAGATCGT TTGGCGCAAGCAGGTCTCAAAATCTGGGTTCTGACAGGTGACAAGATGGAAACTGCAATT AACATCGGGTATGCATGCAGTTTACTGAGGCAAGGCATGAAACAAATATGTTTGTCCATA CCCACTGGTGAGCAGGTAGCCCAGGATGCAAAGAAGGCTGCAAAGGAGAGTCTCCTGTCG CAAATCGCCAATGGGTCACAAATGGTCAAACTCGAGAAGGATCCAGATGCAGCATTCGCT CTAGTTATTGATGGAAAAGCTCTAGCATTTGCTTTGGAGGATGACATGAAGCATATGTTC TTGAACCTGGCAATCGAGTGTGCTTCTGTTATATGTTGCCGTGTGTCACCGAAGCAGAAA GCACTGGTGACTCGTCTCGTCAAAGAAGGTATAGGACAAACCACTTTAGCAGTAGGTGAT GGTGCAAATGATGTGGGCATGATTCAAGAAGCTGATATTGGAGTTGGTATAAGTGGGGTA GAGGGAATGCAGGCAGTGATGGCTAGTGATTTTTCCATTTCTCAATTTCGGTTTCTTGAG AGACTTCTTGTCGTCCATGGACATTGGTGCTACAAGAGAATCGCCCAAATGATTTGCTAC TTCTTTTACAAGAATATTGCCTTTGGACTTACAATATTTTACTTTGAAGCATTCGCTGGG TTTTCTGGGCAATCTGTATACGATGATTGGTTTATGCTGCTTTTCAATGTTGTTCTTACC TCGCTTCCTGTTATATCACTCGGAGTTTTTGAGCAAGATGTTTCGTCCGAAATCTGCTTA CAGTTCCCAGCATTATACCAGCAAGGGCCAAAGAACCTTTTCTTTGATTGGTACCGGATC CTTGGATGGATGGGGAACGGCCTCTTCTCCTCTCTAGCTATATTCTTCCTCAATCTCTGC ATATTCTACGACCAGGCAATCCGTGCTGGAGGGCAGACTGCGGACATGGCTGCGGTGGGA ACTACCATGTTCACCTGCATCATCTGGGCTGTCAACATACAGATTGCCCTAACAATGAGC CATTTCACATGGATTCAACATCTCTTTGTATGGGGCAGCATAACAACTTGGTATATCTTC ATCCTCGCCTACGGGATGACATTGAGGTCCGGCGACAACTACCAGATCCTGTTAGAAGTC CTTGGGCCAGCTCCCATATACTGGGCAGGGACGCTTCTGGTGACTGCTGCTTGCAACATC CCCTACCTGATACACATATCCTACCAGAGATCGTGCAATCCACTTGATCACCATGTGATT CAAGAGATCAAGTATCTAAAGAAAGATGTCGAAGACCAGACAATGTGGAAGAGGGAGCGG TCCAAGGCCAGGCAGAAAACAAAGATTGGTTTCACTGCGCGGGTTGATGCAAAGATCAAG CAGATTAAGGGAAAATTGCATAAGAAAGGCCCATCTTTAACAATCCAAACGGTATCTTAG

Peptide Sequence

PEP ID	Zm00001d046194_P038
PEP Infomation	pep chromosome:B73_RefGen_v4:9:71335515:71350354:-1 gene:Zm00001d046194 transcript:Zm00001d046194_T038 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable phospholipid-transporting ATPase 7
Sequence	MGRSGRRRRDRMRWSNLYTFSCFRAQHEHAGDAGPSSDGAGAVGGPGFSRVVYCNNAALQ KPLKYITNYITTTKYNVVTFFPKAIFEQFRRVANLYFLLTAILSLTPVCPFSAVSMIAPL AFVVGLSMMKEGLEDWRRFMQDMKVNNRNVSVHKSDGEFDYRHWEDLCVGDVVRVEKDQF FPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEVTLPLEEDESFKDFQAVIRCEDP NPSLYTFTGNFEYERQVYALDPSQILLRDSKLRNTAFVYGVVIFTGHDSKVMQNSTESPS KRSRIERKMDLIIYILFTVLVLISLISSIGFAVRIKLDLPRWWYLQPQKSNKLDDPSRPA LSGIFHLITALILYGYLIPISLYVSIELVKVLQAHFINQDIHMFDEETGNTAQARTSNLN EELGQVHTILSDKTGTLTCNQMDFLKCSIAGVSYGVGSSEVELAAAKQMASGADDQDIPI QDIWEENNEDQIELVEGVTFSVGNNRKPSIKGFSFEDDRLMQGNWTKEPNSSTILLFFRI LALCHTAIPEINEATGSIAYEAESPDEGAFLVAAREFGFEFFKRTQSSVFVREKHTSSKG TIEREFKILNLLEFNSKRKRMTVILQDEDGQILLLCKGADSIIFDRLAKNGRMYEVDTTK HLNEYGEAGLRTLALSYRVLDESEYSSWNAEFLKAKTSIGPDRELQLERVSELIERELIL VGATAVEDKLQKGVPQCIDRLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQICLSI PTGEQVAQDAKKAAKESLLSQIANGSQMVKLEKDPDAAFALVIDGKALAFALEDDMKHMF LNLAIECASVICCRVSPKQKALVTRLVKEGIGQTTLAVGDGANDVGMIQEADIGVGISGV EGMQAVMASDFSISQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAG FSGQSVYDDWFMLLFNVVLTSLPVISLGVFEQDVSSEICLQFPALYQQGPKNLFFDWYRI LGWMGNGLFSSLAIFFLNLCIFYDQAIRAGGQTADMAAVGTTMFTCIIWAVNIQIALTMS HFTWIQHLFVWGSITTWYIFILAYGMTLRSGDNYQILLEVLGPAPIYWAGTLLVTAACNI PYLIHISYQRSCNPLDHHVIQEIKYLKKDVEDQTMWKRERSKARQKTKIGFTARVDAKIK QIKGKLHKKGPSLTIQTVS

Transcript Sequence

Transcript ID	Zm00001d046194_T038
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:71335515:71350354:-1 gene:Zm00001d046194 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable phospholipid-transporting ATPase 7
Sequence	TGGCGCCTCGGTTCCTGGTCCAATTCGCCCCGCGGTATAGGAATCCCATCCTAGATTCCA TCGAGGGGCTGCAATGCCGGCACCTGCCTAGCTGGAAATCGGGCGCTAACGGACACCGGG CGCCGAGATGGGCCGTTCCGGCCGCCGCAGGCGGGACCGCATGCGGTGGAGCAATCTCTA CACCTTCTCCTGCTTTCGCGCCCAGCACGAGCACGCCGGCGATGCGGGCCCCTCCTCCGA CGGGGCTGGCGCCGTCGGCGGGCCGGGCTTCTCGCGCGTCGTGTACTGCAACAACGCCGC CCTGCAGAAGCCGCTCAAGTACATCACCAACTACATCACCACCACCAAGTACAACGTCGT CACCTTCTTCCCCAAGGCCATCTTCGAGCAGTTCCGACGCGTTGCCAACCTCTACTTCCT CCTCACCGCCATCCTCTCTCTCACCCCGGTGTGCCCCTTCTCTGCCGTCAGCATGATTGC TCCGCTGGCATTTGTCGTTGGCCTCAGCATGATGAAGGAGGGGTTGGAGGACTGGCGCCG CTTCATGCAGGACATGAAGGTGAACAACCGCAATGTCAGCGTGCACAAGAGTGATGGCGA ATTCGACTACCGGCACTGGGAGGACCTTTGCGTAGGCGATGTGGTCAGGGTTGAGAAGGA CCAGTTCTTCCCTGCTGATTTACTGCTACTGTCCTCAAGCTATGAGGATGGCATTTGCTA TGTCGAGACAATGAACCTCGATGGCGAGACAAACCTTAAGGTGAAGAGGTCACTTGAGGT TACGCTGCCGTTGGAAGAAGACGAGTCCTTTAAAGATTTCCAGGCAGTGATACGCTGTGA GGATCCCAACCCGAGCTTGTACACATTCACTGGTAACTTTGAGTATGAGAGGCAGGTTTA CGCCCTTGATCCGTCTCAGATACTTCTGCGGGACTCAAAACTAAGGAATACAGCCTTTGT CTATGGAGTGGTCATTTTTACCGGTCATGACAGTAAAGTCATGCAGAACTCAACTGAGTC GCCATCCAAGAGGAGCAGGATTGAGAGGAAGATGGATTTGATCATATACATCCTGTTTAC TGTGCTCGTGTTGATATCACTCATTAGTTCAATTGGATTTGCTGTGAGGATCAAGTTAGA TTTGCCCCGCTGGTGGTACTTGCAGCCACAGAAAAGCAATAAGTTAGATGATCCATCACG CCCTGCTCTTTCTGGGATATTCCATCTAATCACGGCTCTCATTCTTTATGGGTATCTGAT TCCAATCTCGTTGTATGTCTCGATTGAACTGGTGAAGGTATTGCAAGCACATTTCATTAA CCAGGATATTCATATGTTTGACGAGGAGACTGGCAATACCGCTCAGGCGCGTACATCAAA CTTGAATGAGGAACTTGGCCAAGTTCATACAATCTTGTCTGATAAAACTGGTACACTGAC CTGCAATCAGATGGATTTCCTGAAGTGTTCAATTGCTGGAGTATCATACGGCGTGGGTTC AAGTGAAGTTGAACTTGCTGCTGCAAAGCAGATGGCGTCAGGTGCTGATGACCAGGATAT CCCTATACAAGATATATGGGAAGAGAACAATGAGGATCAAATCGAGTTGGTAGAAGGAGT TACCTTTAGTGTTGGCAACAACCGAAAGCCCTCCATAAAAGGCTTCAGTTTTGAGGATGA CCGTCTCATGCAAGGGAACTGGACCAAGGAACCAAATTCTTCCACAATTCTACTCTTCTT CAGGATACTTGCTCTGTGTCACACAGCGATACCAGAGATAAATGAAGCAACTGGTTCTAT TGCCTATGAAGCAGAATCACCTGATGAGGGGGCTTTTCTCGTGGCAGCCAGGGAATTTGG ATTTGAATTTTTCAAACGAACACAATCAAGTGTCTTTGTCAGGGAGAAACACACTTCTTC GAAAGGCACAATTGAGAGGGAGTTCAAGATTCTCAATCTATTGGAATTCAATAGCAAAAG AAAACGAATGACTGTAATTCTGCAGGATGAAGATGGTCAAATTCTTCTTTTGTGCAAAGG AGCAGACAGCATCATATTTGATAGATTGGCAAAAAATGGAAGGATGTATGAAGTTGATAC AACTAAGCACCTGAATGAATATGGTGAGGCAGGCTTGCGAACATTGGCACTATCGTACAG GGTGCTTGATGAATCAGAATATTCTTCTTGGAATGCTGAGTTTCTTAAAGCAAAGACCTC TATTGGGCCTGATAGAGAGTTGCAACTTGAACGTGTCTCTGAGTTGATTGAAAGAGAGCT GATCCTTGTTGGTGCAACTGCTGTAGAGGACAAATTACAAAAAGGGGTTCCTCAGTGCAT AGATCGTTTGGCGCAAGCAGGTCTCAAAATCTGGGTTCTGACAGGTGACAAGATGGAAAC TGCAATTAACATCGGGTATGCATGCAGTTTACTGAGGCAAGGCATGAAACAAATATGTTT GTCCATACCCACTGGTGAGCAGGTAGCCCAGGATGCAAAGAAGGCTGCAAAGGAGAGTCT CCTGTCGCAAATCGCCAATGGGTCACAAATGGTCAAACTCGAGAAGGATCCAGATGCAGC ATTCGCTCTAGTTATTGATGGAAAAGCTCTAGCATTTGCTTTGGAGGATGACATGAAGCA TATGTTCTTGAACCTGGCAATCGAGTGTGCTTCTGTTATATGTTGCCGTGTGTCACCGAA GCAGAAAGCACTGGTGACTCGTCTCGTCAAAGAAGGTATAGGACAAACCACTTTAGCAGT AGGTGATGGTGCAAATGATGTGGGCATGATTCAAGAAGCTGATATTGGAGTTGGTATAAG TGGGGTAGAGGGAATGCAGGCAGTGATGGCTAGTGATTTTTCCATTTCTCAATTTCGGTT TCTTGAGAGACTTCTTGTCGTCCATGGACATTGGTGCTACAAGAGAATCGCCCAAATGAT TTGCTACTTCTTTTACAAGAATATTGCCTTTGGACTTACAATATTTTACTTTGAAGCATT CGCTGGGTTTTCTGGGCAATCTGTATACGATGATTGGTTTATGCTGCTTTTCAATGTTGT TCTTACCTCGCTTCCTGTTATATCACTCGGAGTTTTTGAGCAAGATGTTTCGTCCGAAAT CTGCTTACAGTTCCCAGCATTATACCAGCAAGGGCCAAAGAACCTTTTCTTTGATTGGTA CCGGATCCTTGGATGGATGGGGAACGGCCTCTTCTCCTCTCTAGCTATATTCTTCCTCAA TCTCTGCATATTCTACGACCAGGCAATCCGTGCTGGAGGGCAGACTGCGGACATGGCTGC GGTGGGAACTACCATGTTCACCTGCATCATCTGGGCTGTCAACATACAGATTGCCCTAAC AATGAGCCATTTCACATGGATTCAACATCTCTTTGTATGGGGCAGCATAACAACTTGGTA TATCTTCATCCTCGCCTACGGGATGACATTGAGGTCCGGCGACAACTACCAGATCCTGTT AGAAGTCCTTGGGCCAGCTCCCATATACTGGGCAGGGACGCTTCTGGTGACTGCTGCTTG CAACATCCCCTACCTGATACACATATCCTACCAGAGATCGTGCAATCCACTTGATCACCA TGTGATTCAAGAGATCAAGTATCTAAAGAAAGATGTCGAAGACCAGACAATGTGGAAGAG GGAGCGGTCCAAGGCCAGGCAGAAAACAAAGATTGGTTTCACTGCGCGGGTTGATGCAAA GATCAAGCAGATTAAGGGAAAATTGCATAAGAAAGGCCCATCTTTAACAATCCAAACGGT ATCTTAGGAATCTCGGTGGCCTGACAGGCTCGTCAACAGTAGTTGCCACTTTGTTGTTTG CTTCTGCAAGGCAGTGGTTTTAGCTTCTCAGGGCAATATAGCAAAATTCTTT