Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046170_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:68851094:68856482:-1 gene:Zm00001d046170 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase1 description:Phosphoenolpyruvate carboxylase 1

Sequence

ATGGCGTCGACCAAGGCTCCCGGCCCCGGCGAGAAGCACCACTCCATCGACGCGCAGCTC
CGTCAGCTGGTCCCAGGCAAGGTCTCCGAGGACGACAAGCTCATCGAGTACGATGCGCTG
CTCGTCGACCGCTTCCTCAACATCCTCCAGGACCTCCACGGGCCCAGCCTTCGCGAATTT
GTCCAGGAGTGCTACGAGGTCTCAGCCGACTACGAGGGCAAAGGAGACACGACGAAGCTG
GGCGAGCTCGGCGCCAAGCTCACGGGGCTGGCCCCCGCCGACGCCATCCTCGTGGCGAGC
TCCATCCTGCACATGCTCAACCTCGCCAACCTGGCCGAGGAGGTGCAGATCGCGCACCGC
CGCCGCAACAGCAAGCTCAAGAAAGGTGGGTTCGCCGACGAGGGCTCCGCCACCACCGAG
TCCGACATCGAGGAGACGCTCAAGCGCCTCGTGTCCGAGGTCGGCAAGTCCCCCGAGGAG
GTGTTCGAGGCGCTCAAGAACCAGACCGTCGACCTCGTCTTCACCGCGCATCCTACGCAG
TCCGCCCGCCGCTCGCTCCTGCAAAAAAATGCCAGGATCCGAAATTGTCTGACCCAGCTG
AATGCCAAGGACATCACTGACGACGACAAGCAGGAGCTCGATGAGGCTCTGCAGAGAGAG
ATCCAAGCAGCCTTCAGAACCGATGAAATCAGGAGGGCACAACCCACCCCGCAGGACGAA
ATGCGCTATGGGATGAGCTACATCCATGAGACTGTATGGAAGGGTGTGCCTAAGTTCTTG
CGCCGTGTGGATACAGCCCTGAAGAATATCGGCATCAATGAGCGCCTTCCCTACAATGTT
TCTCTCATTCGGTTCTCTTCTTGGATGGGTGGTGACCGCGATGGAAATCCAAGAGTTACC
CCGGAGGTGACAAGAGATGTATGCTTGCTGGCCAGAATGATGGCTGCAAACTTGTACATC
GATCAGATTGAAGAGCTGATGTTTGAGCTCTCTATGTGGCGCTGCAACGATGAGCTTCGT
GTTCGTGCCGAAGAGCTCCACAGTTCGTCTGGTTCCAAAGTTACCAAGTATTACATAGAA
TTCTGGAAGCAAATTCCTCCAAACGAGCCCTACCGGGTGATACTAGGCCATGTAAGGGAC
AAGCTGTACAACACACGCGAGCGTGCTCGCCATCTGCTGGCTTCTGGAGTTTCTGAAATT
TCAGCGGAATCGTCATTTACCAGTATCGAAGAGTTCCTTGAGCCACTTGAGCTGTGCTAC
AAATCACTGTGTGACTGCGGCGACAAGGCCATCGCGGACGGGAGCCTCCTGGACCTCCTG
CGCCAGGTGTTCACGTTCGGGCTCTCCCTGGTGAAGCTGGACATCCGGCAGGAGTCGGAG
CGGCACACCGACGTGATCGACGCCATCACCACGCACCTCGGCATCGGGTCGTACCGCGAG
TGGCCCGAGGACAAGAGGCAGGAGTGGCTGCTGTCGGAGCTGCGAGGCAAGCGCCCGCTG
CTGCCCCCGGACCTTCCCCAGACCGACGAGATCGCCGACGTCATCGGCGCGTTCCACGTC
CTCGCGGAGCTCCCGCCCGACAGCTTCGGCCCCTACATCATCTCCATGGCGACGGCCCCC
TCGGACGTGCTCGCCGTGGAGCTCCTGCAGCGCGAGTGCGGCGTGCGCCAGCCGCTGCCC
GTGGTGCCGCTGTTCGAGAGGCTGGCCGACCTGCAGTCGGCGCCCGCGTCCGTGGAGCGC
CTCTTCTCGGTGGACTGGTACATGGACCGGATCAAGGGCAAGCAGCAGGTCATGGTCGGC
TACTCCGACTCCGGCAAGGACGCCGGCCGCCTGTCCGCGGCGTGGCAGCTGTACAGGGCG
CAGGAGGAGATGGCGCAGGTGGCCAAGCGCTACGGCGTCAAGCTCACCTTGTTCCACGGC
CGCGGAGGCACCGTGGGCAGGGGTGGCGGGCCCACGCACCTTGCCATCCTGTCCCAGCCG
CCGGACACCATCAACGGGTCCATCCGTGTGACGGTGCAGGGCGAGGTCATCGAGTTCTGC
TTCGGGGAGGAGCACCTGTGCTTCCAGACTCTGCAGCGCTTCACGGCCGCCACGCTGGAG
CACGGCATGCACCCGCCGGTCTCTCCCAAGCCCGAGTGGCGCAAGCTCATGGACGAGATG
GCGGTCGTGGCCACGGAGGAGTACCGCTCCGTCGTCGTCAAGGAGGCGCGCTTCGTCGAG
TACTTCAGATCGGCTACACCGGAGACCGAGTACGGGAGGATGAACATCGGCAGCCGGCCA
GCCAAGAGGAGGCCCGGCGGCGGCATCACGACCCTGCGCGCCATCCCCTGGATCTTCTCG
TGGACCCAGACCAGGTTCCACCTCCCCGTGTGGCTGGGAGTCGGCGCCGCATTCAAGTTC
GCCATCGACAAGGACGTCAGGAACTTCCAGGTCCTCAAAGAGATGTACAACGAGTGGCCA
TTCTTCAGGGTCACCCTGGACCTGCTGGAGATGGTTTTCGCCAAGGGAGACCCCGGCATT
GCCGGCTTGTATGACGAGCTGCTTGTGGCGGAAGAACTCAAGCCCTTTGGGAAGCAGCTC
AGGGACAAATACGTGGAGACACAGCAGCTTCTCCTCCAGATCGCTGGGCACAAGGATATT
CTTGAAGGCGATCCATTCCTGAAGCAGGGGCTGGTGCTGCGCAACCCCTACATCACCACC
CTGAACGTGTTCCAGGCCTACACGCTGAAGCGGATAAGGGACCCCAACTTCAAGGTGACG
CCCCAGCCGCCGCTGTCCAAGGAGTTCGCCGACGAGAACAAGCCCGCCGGACTGGTCAAG
CTGAACCCGGCGAGCGAGTACCCGCCCGGCCTGGAAGACACGCTCATCCTCACCATGAAG
GGCATCGCCGCCGGCATGCAGAACACTGGCTAG

Peptide Sequence

PEP ID

Zm00001d046170_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:68851094:68856482:-1 gene:Zm00001d046170 transcript:Zm00001d046170_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase1 description:Phosphoenolpyruvate carboxylase 1

Sequence

MASTKAPGPGEKHHSIDAQLRQLVPGKVSEDDKLIEYDALLVDRFLNILQDLHGPSLREF
VQECYEVSADYEGKGDTTKLGELGAKLTGLAPADAILVASSILHMLNLANLAEEVQIAHR
RRNSKLKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQTVDLVFTAHPTQ
SARRSLLQKNARIRNCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQDE
MRYGMSYIHETVWKGVPKFLRRVDTALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVT
PEVTRDVCLLARMMAANLYIDQIEELMFELSMWRCNDELRVRAEELHSSSGSKVTKYYIE
FWKQIPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTSIEEFLEPLELCY
KSLCDCGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYRE
WPEDKRQEWLLSELRGKRPLLPPDLPQTDEIADVIGAFHVLAELPPDSFGPYIISMATAP
SDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVG
YSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQP
PDTINGSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEM
AVVATEEYRSVVVKEARFVEYFRSATPETEYGRMNIGSRPAKRRPGGGITTLRAIPWIFS
WTQTRFHLPVWLGVGAAFKFAIDKDVRNFQVLKEMYNEWPFFRVTLDLLEMVFAKGDPGI
AGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLKQGLVLRNPYITT
LNVFQAYTLKRIRDPNFKVTPQPPLSKEFADENKPAGLVKLNPASEYPPGLEDTLILTMK
GIAAGMQNTG

Transcript Sequence

Transcript ID

Zm00001d046170_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:68851094:68856482:-1 gene:Zm00001d046170 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase1 description:Phosphoenolpyruvate carboxylase 1

Sequence

GCAGCACGAGCAGCACGCCGTGCCGCTCCAACCATCTCGCTTCCGTGCTTAGCTTCCCGC
CGCGCCATGGCGTCGACCAAGGCTCCCGGCCCCGGCGAGAAGCACCACTCCATCGACGCG
CAGCTCCGTCAGCTGGTCCCAGGCAAGGTCTCCGAGGACGACAAGCTCATCGAGTACGAT
GCGCTGCTCGTCGACCGCTTCCTCAACATCCTCCAGGACCTCCACGGGCCCAGCCTTCGC
GAATTTGTCCAGGAGTGCTACGAGGTCTCAGCCGACTACGAGGGCAAAGGAGACACGACG
AAGCTGGGCGAGCTCGGCGCCAAGCTCACGGGGCTGGCCCCCGCCGACGCCATCCTCGTG
GCGAGCTCCATCCTGCACATGCTCAACCTCGCCAACCTGGCCGAGGAGGTGCAGATCGCG
CACCGCCGCCGCAACAGCAAGCTCAAGAAAGGTGGGTTCGCCGACGAGGGCTCCGCCACC
ACCGAGTCCGACATCGAGGAGACGCTCAAGCGCCTCGTGTCCGAGGTCGGCAAGTCCCCC
GAGGAGGTGTTCGAGGCGCTCAAGAACCAGACCGTCGACCTCGTCTTCACCGCGCATCCT
ACGCAGTCCGCCCGCCGCTCGCTCCTGCAAAAAAATGCCAGGATCCGAAATTGTCTGACC
CAGCTGAATGCCAAGGACATCACTGACGACGACAAGCAGGAGCTCGATGAGGCTCTGCAG
AGAGAGATCCAAGCAGCCTTCAGAACCGATGAAATCAGGAGGGCACAACCCACCCCGCAG
GACGAAATGCGCTATGGGATGAGCTACATCCATGAGACTGTATGGAAGGGTGTGCCTAAG
TTCTTGCGCCGTGTGGATACAGCCCTGAAGAATATCGGCATCAATGAGCGCCTTCCCTAC
AATGTTTCTCTCATTCGGTTCTCTTCTTGGATGGGTGGTGACCGCGATGGAAATCCAAGA
GTTACCCCGGAGGTGACAAGAGATGTATGCTTGCTGGCCAGAATGATGGCTGCAAACTTG
TACATCGATCAGATTGAAGAGCTGATGTTTGAGCTCTCTATGTGGCGCTGCAACGATGAG
CTTCGTGTTCGTGCCGAAGAGCTCCACAGTTCGTCTGGTTCCAAAGTTACCAAGTATTAC
ATAGAATTCTGGAAGCAAATTCCTCCAAACGAGCCCTACCGGGTGATACTAGGCCATGTA
AGGGACAAGCTGTACAACACACGCGAGCGTGCTCGCCATCTGCTGGCTTCTGGAGTTTCT
GAAATTTCAGCGGAATCGTCATTTACCAGTATCGAAGAGTTCCTTGAGCCACTTGAGCTG
TGCTACAAATCACTGTGTGACTGCGGCGACAAGGCCATCGCGGACGGGAGCCTCCTGGAC
CTCCTGCGCCAGGTGTTCACGTTCGGGCTCTCCCTGGTGAAGCTGGACATCCGGCAGGAG
TCGGAGCGGCACACCGACGTGATCGACGCCATCACCACGCACCTCGGCATCGGGTCGTAC
CGCGAGTGGCCCGAGGACAAGAGGCAGGAGTGGCTGCTGTCGGAGCTGCGAGGCAAGCGC
CCGCTGCTGCCCCCGGACCTTCCCCAGACCGACGAGATCGCCGACGTCATCGGCGCGTTC
CACGTCCTCGCGGAGCTCCCGCCCGACAGCTTCGGCCCCTACATCATCTCCATGGCGACG
GCCCCCTCGGACGTGCTCGCCGTGGAGCTCCTGCAGCGCGAGTGCGGCGTGCGCCAGCCG
CTGCCCGTGGTGCCGCTGTTCGAGAGGCTGGCCGACCTGCAGTCGGCGCCCGCGTCCGTG
GAGCGCCTCTTCTCGGTGGACTGGTACATGGACCGGATCAAGGGCAAGCAGCAGGTCATG
GTCGGCTACTCCGACTCCGGCAAGGACGCCGGCCGCCTGTCCGCGGCGTGGCAGCTGTAC
AGGGCGCAGGAGGAGATGGCGCAGGTGGCCAAGCGCTACGGCGTCAAGCTCACCTTGTTC
CACGGCCGCGGAGGCACCGTGGGCAGGGGTGGCGGGCCCACGCACCTTGCCATCCTGTCC
CAGCCGCCGGACACCATCAACGGGTCCATCCGTGTGACGGTGCAGGGCGAGGTCATCGAG
TTCTGCTTCGGGGAGGAGCACCTGTGCTTCCAGACTCTGCAGCGCTTCACGGCCGCCACG
CTGGAGCACGGCATGCACCCGCCGGTCTCTCCCAAGCCCGAGTGGCGCAAGCTCATGGAC
GAGATGGCGGTCGTGGCCACGGAGGAGTACCGCTCCGTCGTCGTCAAGGAGGCGCGCTTC
GTCGAGTACTTCAGATCGGCTACACCGGAGACCGAGTACGGGAGGATGAACATCGGCAGC
CGGCCAGCCAAGAGGAGGCCCGGCGGCGGCATCACGACCCTGCGCGCCATCCCCTGGATC
TTCTCGTGGACCCAGACCAGGTTCCACCTCCCCGTGTGGCTGGGAGTCGGCGCCGCATTC
AAGTTCGCCATCGACAAGGACGTCAGGAACTTCCAGGTCCTCAAAGAGATGTACAACGAG
TGGCCATTCTTCAGGGTCACCCTGGACCTGCTGGAGATGGTTTTCGCCAAGGGAGACCCC
GGCATTGCCGGCTTGTATGACGAGCTGCTTGTGGCGGAAGAACTCAAGCCCTTTGGGAAG
CAGCTCAGGGACAAATACGTGGAGACACAGCAGCTTCTCCTCCAGATCGCTGGGCACAAG
GATATTCTTGAAGGCGATCCATTCCTGAAGCAGGGGCTGGTGCTGCGCAACCCCTACATC
ACCACCCTGAACGTGTTCCAGGCCTACACGCTGAAGCGGATAAGGGACCCCAACTTCAAG
GTGACGCCCCAGCCGCCGCTGTCCAAGGAGTTCGCCGACGAGAACAAGCCCGCCGGACTG
GTCAAGCTGAACCCGGCGAGCGAGTACCCGCCCGGCCTGGAAGACACGCTCATCCTCACC
ATGAAGGGCATCGCCGCCGGCATGCAGAACACTGGCTAGGCGGCTTCTCTTCACTCACCT
GCAGAGTGCACCGCAATAATCAGCTTCCGGATGGTGGCGTTTTGTCAGTTTTGGATGGAA
ATGCCGAACTGGCAGCGTCTGTTTTCCCTATGCATATGTAATTTCCTGCCTCTTTATATT
CACTCTTGTTGTCAAGTCCAAGTGGAAAATCTTGGCATATTATACATATTGTAATAATAA
ACATCGTACAATCTGCATGCTGTTTTGTAATAATTAATTAATATCCCAGCCCATTGGATG
GACTTGTTTACCATGGTGTTACTTC