Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046142_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:66688256:66689218:1 gene:Zm00001d046142 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL41
Sequence	ATGTCCACCACGGTCTCGCCGCCGCCAGACTCTTTCGGCGATGCCCCAACGGCACCCGGC ACCCCCAGCTCCAACTTCACGCTGCTGTACATCATCATCGCGGTGCTCACCGGCGTGATA CTGTACGTGGCCATCCGCCATGGCCAGTCAGTCCTGGCCGAGTGGCAACGGCTCCAGGGA GGCGGCCAGGGCGAGGCCGAGGCGTCCGGGACGAGGCTCGGGCTTAGCGTGGAGGACATC GCCGCGCTGCCCACGTTCACGTACCAGGCGCGGGCCGCGTCGGCGTCGCCGCAAGGTGGC GGGATGAGCCGCAGCAAGGGCAGGACGCCGGGCCGGGCGGTGGTGGAGTGCGTCGTGTGC CTGCAGGAGATGGAGGACGGCGACGTCGTGCGCGCGCTGCCCGCGTGCAGGCACTTCTTC CACGGTGGCTGCATCGACGCCTGGCTGTCCGCGCACTCGACGTGCCCCGTGTGCCGCGCG CACCCGAAACCCGAGCGCGCGCGGCTGGCGGAGGCGCCCATGTCCCCGCCACTGCCGCAG CTGCGACGGTGCGGCGTGTCGCCTGAGCGGTCCACGGCATCGAGGGTCCTGGTGGACATC CTGGCGCGGTCACCGTTGAGAAACAGCTGCTCCTGCTCGACAAGTGGATCCAAATCCAAG GAGACCATCGTCTCAAAATCACCATCGCCAAGGCTTCACTTTGGGTCAAGGATTCCGTCT CCGAAGCCGCAGTTGTCTGGCCGGGTGGAAGATAGATGCTCAATGTCACCTCCATCGGGA TTATCAGAAATCGTGGTTGTCCCATCCAAGTCGCCGTCGCCGATGAGGTTCAGCACAAGC AGGCAGTTGACGACGGCGAGAAGCGTTGCAACATTGGAAAGGATAGAGGTGATCGCGTCA GCATCACCGTCACCGTTGCCAATTAGAGAGGACGGTGGTGGTTCCCTGTCGAAGTCGCAG TAG

Peptide Sequence

PEP ID	Zm00001d046142_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:66688256:66689218:1 gene:Zm00001d046142 transcript:Zm00001d046142_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL41
Sequence	MSTTVSPPPDSFGDAPTAPGTPSSNFTLLYIIIAVLTGVILYVAIRHGQSVLAEWQRLQG GGQGEAEASGTRLGLSVEDIAALPTFTYQARAASASPQGGGMSRSKGRTPGRAVVECVVC LQEMEDGDVVRALPACRHFFHGGCIDAWLSAHSTCPVCRAHPKPERARLAEAPMSPPLPQ LRRCGVSPERSTASRVLVDILARSPLRNSCSCSTSGSKSKETIVSKSPSPRLHFGSRIPS PKPQLSGRVEDRCSMSPPSGLSEIVVVPSKSPSPMRFSTSRQLTTARSVATLERIEVIAS ASPSPLPIREDGGGSLSKSQ

Transcript Sequence

Transcript ID	Zm00001d046142_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:66688256:66689218:1 gene:Zm00001d046142 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL41
Sequence	ATGTCCACCACGGTCTCGCCGCCGCCAGACTCTTTCGGCGATGCCCCAACGGCACCCGGC ACCCCCAGCTCCAACTTCACGCTGCTGTACATCATCATCGCGGTGCTCACCGGCGTGATA CTGTACGTGGCCATCCGCCATGGCCAGTCAGTCCTGGCCGAGTGGCAACGGCTCCAGGGA GGCGGCCAGGGCGAGGCCGAGGCGTCCGGGACGAGGCTCGGGCTTAGCGTGGAGGACATC GCCGCGCTGCCCACGTTCACGTACCAGGCGCGGGCCGCGTCGGCGTCGCCGCAAGGTGGC GGGATGAGCCGCAGCAAGGGCAGGACGCCGGGCCGGGCGGTGGTGGAGTGCGTCGTGTGC CTGCAGGAGATGGAGGACGGCGACGTCGTGCGCGCGCTGCCCGCGTGCAGGCACTTCTTC CACGGTGGCTGCATCGACGCCTGGCTGTCCGCGCACTCGACGTGCCCCGTGTGCCGCGCG CACCCGAAACCCGAGCGCGCGCGGCTGGCGGAGGCGCCCATGTCCCCGCCACTGCCGCAG CTGCGACGGTGCGGCGTGTCGCCTGAGCGGTCCACGGCATCGAGGGTCCTGGTGGACATC CTGGCGCGGTCACCGTTGAGAAACAGCTGCTCCTGCTCGACAAGTGGATCCAAATCCAAG GAGACCATCGTCTCAAAATCACCATCGCCAAGGCTTCACTTTGGGTCAAGGATTCCGTCT CCGAAGCCGCAGTTGTCTGGCCGGGTGGAAGATAGATGCTCAATGTCACCTCCATCGGGA TTATCAGAAATCGTGGTTGTCCCATCCAAGTCGCCGTCGCCGATGAGGTTCAGCACAAGC AGGCAGTTGACGACGGCGAGAAGCGTTGCAACATTGGAAAGGATAGAGGTGATCGCGTCA GCATCACCGTCACCGTTGCCAATTAGAGAGGACGGTGGTGGTTCCCTGTCGAAGTCGCAG TAG