Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046020_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:9:55668318:55690130:-1 gene:Zm00001d046020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative VHS/GAT domain containing family protein
Sequence	ATGCCTATACTAAGCAACTACTATTGTTTCCCTTCTCCTTTTCAGTTGCTGGAGACCTTG ATTAAAAATTGTGGTGATTTTGTTCATATGCAAGTTGCTGAGAAGGATATGCTTCATGAA ATGGTGAAGATAGCTAAGAAGAAGCCTGACTATCACGTCAAAGAGAAGATATTAATTCTG ATAGACACTTGGCAAGAAGCTTTTGGTGGTGCCCGTGCAAGATATCCCCAGTATTACGCA GCATATCAAGAGATGCTGCGTGCTGGAGCTGTATTTCCTCAAAGGCCGGAGAGTACTGTG CCAATCTATACTCCTCCACAGACACAGCCTCTACGGAACTATCCGCCTCCTGCATTGCGT AACACTGATTATCGACATGATGTGCCTGAATCCTCTTCTGCACCAGAAGTGCCTGCATTA AGCTTGACAGAAATTCAGAATGCACGTGGGGTCATGGATGTTCTTTCAGAGATGTTAAAT GCTATCGATCCTGGTAACAGAGAGGGTCTAAGGCAGGAGGTCATTGTGGACCTTGTGGAC CAATGTCGTTCATACAAGCAAAGAGTGGTGCAGCTTGTCAACTCAACATCGGATGAGGAC CTATTAAGTCAGGGCCTTACTTTGAATGATGATTTACAACGTGTTTTAGCAAAGCACGAT GCAATTGCTGCTGGCATAGCCATTCGATTACAAAAACCAAAATCAGCCCCGGCCCGCGCA GACAGTTCTCCAACGAAGCCTGAGCCGACAAAGGAAACAGAACAAAGGTCTGCTAAAGTT GCCAGTAGTGTGACTCCATTTGAGCAGTTAGCACTTCCTGCACCACCATCATCAAGTGCT TCAAAGTCTCATGGAGAATCAGCTGTTAGCCCAAATATTGATTTGCTTAGTGGTGATGAG TTTTTTAAACCAGAACCTGTTCATTCCCAAGCTCTTGTTCCTTTAGTCACTCAGGCTTCA GCTTCTTCAAGCCCCAGTACTTTAGACCTTTTAGACATGTTTTCTGATAGCAATGCTATC AATAACACCAGCCAGAACCCTACCATACTTTCTATATCTAACTCAAATCCTAATACATCA GTACAAGCCTATCCTGTTCCACAGCAACCTGTTCCACCACACCATCCTTCACCATATGCT AATGGCTTAAATTCAGATACAATGACACCCTTTGATCAAGGCTCTAAGTTAACCTCAGCA AGTTCATGGAATGAACAGATTGCCCATGGAATGATTCCACCACAGCAGTTTGCCCATGGT CAAGGTGAACAAAGCAACGACCTTCCACTACCACCCTGGGAAGCTCTGCCTGCAGAAACT GAGCAATTAGAAGCTGACCATCCTGGTGGGTTGTCAGCTCTGCCACAATTTGGAGTTAGT CAACCCCAGCCAGTCCAAATTACACATTCTGGGCAGCAAGTGTTACCATCGCAATTAATG CCAACTGGACAACCGGGAGGGCAGTTCCAGCCTAGATTTGGGGCTCAACAACCATATGCT ACAGAAAATACGCAGTATGGAGGAATGTATCCGCCAGTGCAAGGCAACCAACCAACGGGT ATTTATCCCCAGCAAATGGCTGGAGATGTCTACCAGCAACAGATGTTTGGTGGCCAGATG ATAGGTTATGGCTATGGTCCGCAGCCTGGAGGCTACTACGTGCCGAACGCCGCATATGCA TATGCCGGTGCAAATGATCTTTCTCAGAGGATGAATGGCCTCTCGATGCAAGGCAACAGT CTGTATGGCACACCCGCGTCGTCTTCCCTCCAGCAGCGTAACAGGCCAAGCAGACCTGAA GATTCGCTCTTTAGTGATCTTGTTAGCATCGCCAAAACAAAGCCTTGTAAAACTGCTTCC AACAAGGCTGGTAACTTGTAA

Peptide Sequence

PEP ID	Zm00001d046020_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:9:55668318:55690130:-1 gene:Zm00001d046020 transcript:Zm00001d046020_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative VHS/GAT domain containing family protein
Sequence	MPILSNYYCFPSPFQLLETLIKNCGDFVHMQVAEKDMLHEMVKIAKKKPDYHVKEKILIL IDTWQEAFGGARARYPQYYAAYQEMLRAGAVFPQRPESTVPIYTPPQTQPLRNYPPPALR NTDYRHDVPESSSAPEVPALSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVD QCRSYKQRVVQLVNSTSDEDLLSQGLTLNDDLQRVLAKHDAIAAGIAIRLQKPKSAPARA DSSPTKPEPTKETEQRSAKVASSVTPFEQLALPAPPSSSASKSHGESAVSPNIDLLSGDE FFKPEPVHSQALVPLVTQASASSSPSTLDLLDMFSDSNAINNTSQNPTILSISNSNPNTS VQAYPVPQQPVPPHHPSPYANGLNSDTMTPFDQGSKLTSASSWNEQIAHGMIPPQQFAHG QGEQSNDLPLPPWEALPAETEQLEADHPGGLSALPQFGVSQPQPVQITHSGQQVLPSQLM PTGQPGGQFQPRFGAQQPYATENTQYGGMYPPVQGNQPTGIYPQQMAGDVYQQQMFGGQM IGYGYGPQPGGYYVPNAAYAYAGANDLSQRMNGLSMQGNSLYGTPASSSLQQRNRPSRPE DSLFSDLVSIAKTKPCKTASNKAGNL

Transcript Sequence

Transcript ID	Zm00001d046020_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:55668318:55690130:-1 gene:Zm00001d046020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative VHS/GAT domain containing family protein
Sequence	GCGGAGGAAGAAGGGAACTCGCCGCCTAGGGTTCCGCCGCCGCCTACTCTTCCGCCGATC AAGGAGCGGGAATCATTGCGCGATGCCGCAGTCGGTGCTGGTGGAACGCGCGACGAGCGA GTCGCTCATCGGCCCTGACTGGTCTCTCAACCTTGAGATCTGCGACATCCTCAACCACGA CCCCTCGCAAGCCAAAGATGTAGTGAAGACTATCAAGAAACGGATTGCACACAAGAACTC AAAGGTCCAGCTTCTTGCATTAACGGTAAATACCATTCTGCAATTGGCTTGATACCTTCG GTTTGCATATGAATTATGAGTTGCCATTTTGTCATGTATAAGCCGGCAGAGTAGCCTTCT CTATTGTGCATATGCTCATAAAGATGAAAAATAGCATGCATCTTTCAGCATTACTTCATT CTATCAGTTGATCGATGGCTCATTTATTCCATAGTAATTACATCAATTCTAGCTCTGGTT ACGACTTCAGTTCATTTAGTAAACTAGCATTTGAATTATGATTTAACAGGCGTGATCACC AAACTGTGATGGTAATTAAATAGGACAACTGTTAAGAACATGTTGTTTAATAACGACTAG CTATAGCTAAAATACATTTATGGACTCTGCAATCAGCATCTACTTGTGTTCTAAGGCTGC AAGGATGATTCAGTAATAACTAAGGCTTTTGCATTACCAATGATGATTCAGTAGTATTCT AGGCTTTTGGATTAATTATAACTAGAAGGATACCCCACATGTTGCTGCAGGAATTGCGGA CAGTTTAGAATGAACTTAGGCTACATATAATTTCTTTTATATAAGGGATAAACTATTATA GATTGATGTTGCTGTATGATGTGGCACGTTGATGTCGACAGCTAAATGTATGTTAGTGGA TTTTGTCTCGTTGATGTGGATATCACAGTTGCATATGCTGCATAGAAACCAAGTGTTTTC AGGTTTGTGTTGTAAGGGTTCTTCCCCCCTTTGTTTCTTCTTAGTATAATGACATGCAGC TTTCCTTCGTGTTCGCGAAAAACAATTGCATGTGCTAGTGAGTTGTAATAACATGTGCTA GTGGACTGCTGAGGTGAACATCTTGCATGTGGAGATAGAATGTTAGTGGGATTTAGGATC ATAAGAGATATAGGGTATGTTTGGTTTGAATTTTGGCTTTGGCTTTTGCCCCCCTAAAAG CCAAAAGCCAACCAAAGGGTTGGATCCAGGAAGCAGCTTTTTCTAAAAGCCGACTTTCTC GTAGTGCAAATCTGAAAGCACCTCTGGACCTGCTTTTAGTGGCTTTTTGGATGGAACTGT GAAAACATATATCGAAGAATTTTTAACGACTTTTAGTGGTTTCCACCAAACGGTTTTTAG TTTTTTAACAGCTTACAGCCTACAACAGCTTTTTCCACAACTCACAGCCCACAACAATTT TTTTCAGAGCCATATCCCAACCGAACAGACCCATAGATATATAGAATGGTAAATGCAATG TTTGTAGGACTGACTGTTGTTGGAATTGTGTAATGATCAATGTAACTTTGTATATTCTTT GTTTTATCAAGAAAATTCTTTGGCATTGTAAAAAACGATACTGCATGACAAGACCAGGAT AACATATTGTCCTATATATATGTAATCCTATATTTATTATCTCTAGAATCTTAGGCTTCC TGTTTTACTACTTTATCTTACATATATCCTCTTTTACCTGTCTCAGAATAGGCTCGTTCT CCCAGATGCACATAATCGAACAATGTTTGTTTCTGAAATTTTATCTGATAGCTTGTGGCT GTTGTTCATACTTCATACTTGAAAGCAGGCAACAGTTTACTCAGTATGCCTATACTAAGC AACTACTATTGTTTCCCTTCTCCTTTTCAGTTGCTGGAGACCTTGATTAAAAATTGTGGT GATTTTGTTCATATGCAAGTTGCTGAGAAGGATATGCTTCATGAAATGGTGAAGATAGCT AAGAAGAAGCCTGACTATCACGTCAAAGAGAAGATATTAATTCTGATAGACACTTGGCAA GAAGCTTTTGGTGGTGCCCGTGCAAGATATCCCCAGTATTACGCAGCATATCAAGAGATG CTGCGTGCTGGAGCTGTATTTCCTCAAAGGCCGGAGAGTACTGTGCCAATCTATACTCCT CCACAGACACAGCCTCTACGGAACTATCCGCCTCCTGCATTGCGTAACACTGATTATCGA CATGATGTGCCTGAATCCTCTTCTGCACCAGAAGTGCCTGCATTAAGCTTGACAGAAATT CAGAATGCACGTGGGGTCATGGATGTTCTTTCAGAGATGTTAAATGCTATCGATCCTGGT AACAGAGAGGGTCTAAGGCAGGAGGTCATTGTGGACCTTGTGGACCAATGTCGTTCATAC AAGCAAAGAGTGGTGCAGCTTGTCAACTCAACATCGGATGAGGACCTATTAAGTCAGGGC CTTACTTTGAATGATGATTTACAACGTGTTTTAGCAAAGCACGATGCAATTGCTGCTGGC ATAGCCATTCGATTACAAAAACCAAAATCAGCCCCGGCCCGCGCAGACAGTTCTCCAACG AAGCCTGAGCCGACAAAGGAAACAGAACAAAGGTCTGCTAAAGTTGCCAGTAGTGTGACT CCATTTGAGCAGTTAGCACTTCCTGCACCACCATCATCAAGTGCTTCAAAGTCTCATGGA GAATCAGCTGTTAGCCCAAATATTGATTTGCTTAGTGGTGATGAGTTTTTTAAACCAGAA CCTGTTCATTCCCAAGCTCTTGTTCCTTTAGTCACTCAGGCTTCAGCTTCTTCAAGCCCC AGTACTTTAGACCTTTTAGACATGTTTTCTGATAGCAATGCTATCAATAACACCAGCCAG AACCCTACCATACTTTCTATATCTAACTCAAATCCTAATACATCAGTACAAGCCTATCCT GTTCCACAGCAACCTGTTCCACCACACCATCCTTCACCATATGCTAATGGCTTAAATTCA GATACAATGACACCCTTTGATCAAGGCTCTAAGTTAACCTCAGCAAGTTCATGGAATGAA CAGATTGCCCATGGAATGATTCCACCACAGCAGTTTGCCCATGGTCAAGGTGAACAAAGC AACGACCTTCCACTACCACCCTGGGAAGCTCTGCCTGCAGAAACTGAGCAATTAGAAGCT GACCATCCTGGTGGGTTGTCAGCTCTGCCACAATTTGGAGTTAGTCAACCCCAGCCAGTC CAAATTACACATTCTGGGCAGCAAGTGTTACCATCGCAATTAATGCCAACTGGACAACCG GGAGGGCAGTTCCAGCCTAGATTTGGGGCTCAACAACCATATGCTACAGAAAATACGCAG TATGGAGGAATGTATCCGCCAGTGCAAGGCAACCAACCAACGGGTATTTATCCCCAGCAA ATGGCTGGAGATGTCTACCAGCAACAGATGTTTGGTGGCCAGATGATAGGTTATGGCTAT GGTCCGCAGCCTGGAGGCTACTACGTGCCGAACGCCGCATATGCATATGCCGGTGCAAAT GATCTTTCTCAGAGGATGAATGGCCTCTCGATGCAAGGCAACAGTCTGTATGGCACACCC GCGTCGTCTTCCCTCCAGCAGCGTAACAGGCCAAGCAGACCTGAAGATTCGCTCTTTAGT GATCTTGTTAGCATCGCCAAAACAAAGCCTTGTAAAACTGCTTCCAACAAGGCTGGTAAC TTGTAAACATGAGTTTCTGCTCATAGTATATAAAATTCTTGAAATTTTTTTCCTATTGGA AAGTAGTGGGCGAGATTT