Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046016_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:55158778:55161731:-1 gene:Zm00001d046016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 3-and 4-kinase family protein
Sequence	ATGTCGTCAGCTGGTGTGATCGTCTTGGGGCCAGTCCCAAAAGACCCTGCTTTCCTGCCT ATCTGCTTCAACGGCAGCCGGTCGCCACACTGCTCGTCTGGGTCACAGCTGCAGGATTCC ATTCTTATTTTCCTTGCTGTGCCTGGTATGTCACCCATGCCCATGAGCGTGCTGGAATCT GAGTCCATTGCCTCCGTGAAGCTGCGCATCCAGCGGTTCAAGGGCTTTGTGGCGACGAAG CAGCGGCTTGTGCTGGATGGGCATGAACTGGCAAGAAATAACTGCCCAGTCAAGGATTAT GGGCTGGCTGAGGGAAATGTTCTTCATCTTGTTATTCGACTGTCTGATCTCCGTGTGATC AATATTGAGACTGCAACTGGAAAGAAGTTTCAGTTTCAGGTGGATCAGAGCCGCAATGTT AAGTTTCTTAAGAACAAGCTTGCAGCAGAGGGTGATGAGGATATTGGTAATCTTCAGGAT CACAAGCTTGAATATGATGGCGAGGAGCTTGAGGACCACCAGCTGATAGCTGATATTAGC AAGAGGGATGATGCTGTAATTCATTTGTTCATCCTCAAACCAGCAAAAGTACTGACACAG CAAGTTGATAGAGATACTTTGGTTACAGTTCTCAATCCACAGGAGAAAGGCAACCTGCAA AATGAACCTCGCTCAATGAACTCCACAAAATCAGTTGAGGTTAGGCCTGCTCCTGTTGAA CCAATAGTTAGCCAAAATGTGAAGCTGTCACCTGAATTGATTAAGATGATAAATTTAACC ACAGTTGGACTGGAGAAAGGGCACCTGCCTGTGATGTCAGCTGAAGGTTCAGGAGGTGTA TATTTCATGCGAGATGCAACAGGTCAGAAGAATATTGCTGTGTTTAAGCCTATTGATGAG GAACCCATGGCCAAAAACAACCCAAGGGGTCTTCCTTTGTCCACTGATGGCGAGGGGATG AAGAGGGGAACAATTGTAGGGGGAGGTGCATTCAGGGAGGTTGCAGCTTATATTCTCGAC CATCCAGTTAGTGATAGTAAATCTGGTCACAGTTTTGGGTTTTCTGGTGTGCCTCCCACC ACATTGGTCCGAACCTCGCATAGGGGGAAGAACTTCAAGATTGGTTCACTGCAGATGTTC ATGGACAACAATGGAAGCACTGAAGATATGGGTCCTCGACCTTTTCCTGTCAAGGAGGTT CATAAAATAGCAGTACTAGATATTAGGTTAGCTAATGCTGATCGTCATGCTGGGAATATT CTAGTGTGCAAGGAGAGAGAAGGTGGCAACTACAAGCTGATTCCAATTGATCATGGTTAC TGCTTGCCAGAGAAGTTTGAAGATTGTACATTTGAGTGGCTCTACTGGCCCCAAGCCCGT GAGCCATTCAATGATGAAACCATTGAATACATCAAATCACTCGATGCTGAAGAAGACATC AAGCTTCTCAAGATCCATGGGTGGGAGCTGCCTCCACGGTGTGCTCGTGTCCTGCGCATC AGCACAATGCTTTTGAAGAAAGGTGCATCTCGTGGCTTCACGCCCTATGACATAGGGCGC ATACTATGCAGGGAAACTGTGAATAGGGACTCTGAGATTGAGGTCATCATTCAGGAAGCA GAGGATGCTGTTCTCCCATGGTCCAGTGAAAACATGTTCTTAGAAACTTTATCTGAAATC ATGGACCGTCACCTCCACAAGGAATGA

Peptide Sequence

PEP ID	Zm00001d046016_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:55158778:55161731:-1 gene:Zm00001d046016 transcript:Zm00001d046016_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 3-and 4-kinase family protein
Sequence	MSSAGVIVLGPVPKDPAFLPICFNGSRSPHCSSGSQLQDSILIFLAVPGMSPMPMSVLES ESIASVKLRIQRFKGFVATKQRLVLDGHELARNNCPVKDYGLAEGNVLHLVIRLSDLRVI NIETATGKKFQFQVDQSRNVKFLKNKLAAEGDEDIGNLQDHKLEYDGEELEDHQLIADIS KRDDAVIHLFILKPAKVLTQQVDRDTLVTVLNPQEKGNLQNEPRSMNSTKSVEVRPAPVE PIVSQNVKLSPELIKMINLTTVGLEKGHLPVMSAEGSGGVYFMRDATGQKNIAVFKPIDE EPMAKNNPRGLPLSTDGEGMKRGTIVGGGAFREVAAYILDHPVSDSKSGHSFGFSGVPPT TLVRTSHRGKNFKIGSLQMFMDNNGSTEDMGPRPFPVKEVHKIAVLDIRLANADRHAGNI LVCKEREGGNYKLIPIDHGYCLPEKFEDCTFEWLYWPQAREPFNDETIEYIKSLDAEEDI KLLKIHGWELPPRCARVLRISTMLLKKGASRGFTPYDIGRILCRETVNRDSEIEVIIQEA EDAVLPWSSENMFLETLSEIMDRHLHKE

Transcript Sequence

Transcript ID	Zm00001d046016_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:55158778:55161731:-1 gene:Zm00001d046016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 3-and 4-kinase family protein
Sequence	AAACTTGCCCTCTTCTCTGCTTGAACCGCGGAGCAAGACCGCTCTTGTTCTCTTCTCTGC TTGAACTGCGGAGAAAGACCGAATCCGAAGGGACGTTGGGACTTTCTGGCTGGGAAGACT ACATACCATTTCTCTAATTCGGGCGTGGTTTGTGCTGGGAGGGAAGGAATCCATGGGGCT GCAGCTCGATCCGCGCTGAGGGTTGAAGGAACCGGCCTTGTTGTGTGCTCCACCCAATCG AGGAAAAGGGGCAAGGATTGCTGCTTTGTTGTCTTTGGATCCGTTACGCCATTGGGGATT CAACCATCAGCAGGGCGAAGTGACGGTTCTGCACCACTTTTCCCCTTATCCTAATTCGAT TTTATTTGAACACTGGATGTGATTATAATCTCGGTTGCTGTTCTGTGCGGCTCTATCTGA GGGTTTCCTCCGTCCTGGATCGGGAAGGAAGGCGCCCTTGGATTTCCGTCTCCATGGCGC CCGCCTTGTAACCCACGGAGTCTAACTTTTAAATTTAGTGTAAATATTAGTGGTAGCAGC TGTTAAGGAAGCCCCGGTCTCCTTAGTAGCCACCGTGTGAATATGTCGTCAGCTGGTGTG ATCGTCTTGGGGCCAGTCCCAAAAGACCCTGCTTTCCTGCCTATCTGCTTCAACGGCAGC CGGTCGCCACACTGCTCGTCTGGGTCACAGCTGCAGGATTCCATTCTTATTTTCCTTGCT GTGCCTGGTATGTCACCCATGCCCATGAGCGTGCTGGAATCTGAGTCCATTGCCTCCGTG AAGCTGCGCATCCAGCGGTTCAAGGGCTTTGTGGCGACGAAGCAGCGGCTTGTGCTGGAT GGGCATGAACTGGCAAGAAATAACTGCCCAGTCAAGGATTATGGGCTGGCTGAGGGAAAT GTTCTTCATCTTGTTATTCGACTGTCTGATCTCCGTGTGATCAATATTGAGACTGCAACT GGAAAGAAGTTTCAGTTTCAGGTGGATCAGAGCCGCAATGTTAAGTTTCTTAAGAACAAG CTTGCAGCAGAGGGTGATGAGGATATTGGTAATCTTCAGGATCACAAGCTTGAATATGAT GGCGAGGAGCTTGAGGACCACCAGCTGATAGCTGATATTAGCAAGAGGGATGATGCTGTA ATTCATTTGTTCATCCTCAAACCAGCAAAAGTACTGACACAGCAAGTTGATAGAGATACT TTGGTTACAGTTCTCAATCCACAGGAGAAAGGCAACCTGCAAAATGAACCTCGCTCAATG AACTCCACAAAATCAGTTGAGGTTAGGCCTGCTCCTGTTGAACCAATAGTTAGCCAAAAT GTGAAGCTGTCACCTGAATTGATTAAGATGATAAATTTAACCACAGTTGGACTGGAGAAA GGGCACCTGCCTGTGATGTCAGCTGAAGGTTCAGGAGGTGTATATTTCATGCGAGATGCA ACAGGTCAGAAGAATATTGCTGTGTTTAAGCCTATTGATGAGGAACCCATGGCCAAAAAC AACCCAAGGGGTCTTCCTTTGTCCACTGATGGCGAGGGGATGAAGAGGGGAACAATTGTA GGGGGAGGTGCATTCAGGGAGGTTGCAGCTTATATTCTCGACCATCCAGTTAGTGATAGT AAATCTGGTCACAGTTTTGGGTTTTCTGGTGTGCCTCCCACCACATTGGTCCGAACCTCG CATAGGGGGAAGAACTTCAAGATTGGTTCACTGCAGATGTTCATGGACAACAATGGAAGC ACTGAAGATATGGGTCCTCGACCTTTTCCTGTCAAGGAGGTTCATAAAATAGCAGTACTA GATATTAGGTTAGCTAATGCTGATCGTCATGCTGGGAATATTCTAGTGTGCAAGGAGAGA GAAGGTGGCAACTACAAGCTGATTCCAATTGATCATGGTTACTGCTTGCCAGAGAAGTTT GAAGATTGTACATTTGAGTGGCTCTACTGGCCCCAAGCCCGTGAGCCATTCAATGATGAA ACCATTGAATACATCAAATCACTCGATGCTGAAGAAGACATCAAGCTTCTCAAGATCCAT GGGTGGGAGCTGCCTCCACGGTGTGCTCGTGTCCTGCGCATCAGCACAATGCTTTTGAAG AAAGGTGCATCTCGTGGCTTCACGCCCTATGACATAGGGCGCATACTATGCAGGGAAACT GTGAATAGGGACTCTGAGATTGAGGTCATCATTCAGGAAGCAGAGGATGCTGTTCTCCCA TGGTCCAGTGAAAACATGTTCTTAGAAACTTTATCTGAAATCATGGACCGTCACCTCCAC AAGGAATGAGTTTAGAAATTCAGAATAACTTATCTAGTTGCTCCAGCTGTATCCGGTTTG TTGTAAGTATTGTAGACAAGGGGTGTCAAGGGACTAATGATTTCATTTGTTTGTATCCTC TCAAATGATTTCACTTGGTTGTAATTGCTCGAGTACTTTGCTTATGCACATTTTGTGAAT AATATATTTGTTTGGTTAGACCCTGTGGCTTTGTTGGAATGTCTATAAGCTATGGGCTAT GGCAATAAACCAAACAAATGCCAAAC