Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045956_T028
CDS Infomation	cds chromosome:B73_RefGen_v4:9:49739756:49744683:1 gene:Zm00001d045956 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phospholipid-transporting ATPase 9
Sequence	ATGTTCAAAAGGCTTGCACCAAATGGAAGAAAATATGAAGAAGAAACAAGAAGACACATA AATGAGTATTCTGACTCTGGTCTAAGAACCTTGGTTCTAGCATACCGTGTCTTAGATGAG AAAGAGTACAAGGAATTCAATGAAAAACTGAACACTGCCAAAGCATCTGTAAGTGCTGAT AGAGATGTAAAAATTGAGCAGGCTGCTGATAGCATTGAACAGGACTTGATTCTTCTTGGT GCTACTGCAGTTGAAGATAAGCTCCAGCAAGGGGTGCCTGAATGCATAGACAAGCTTGCG CAAGCCGGAATTAAGATATGGGTCCTGACTGGCGACAAGATGGAGACAGCTATCAATATT GGGTTTGCATGTAGCCTGCTTAGGCAAGACATGACACAGATAATTGTCACACTGGAACAA CCTGACATCATCGCGTTGGAGAAAGATGGTGACAAATATAAAATTTTTAAGGCATCAAAG AAAAAGGTTATGAGTCAGATAGAGGATGGAATCAAACAAATTCCACCTTCAACTAAAATT AGCACTGCATCATTTGCACTAATCATTGATGGTAAATCAATACCTTATGCTTTGGAAGAT GATGTCAAGTTTAAGTTCTTGGATCTTGCTATCAACTGTGCATCAGTGATATGTTGCCGA TCTTCACCAAAACAGAAGGCACTGGTCACAAGATTTGTTAAGCAAGTAACACATAAAGTG ACTTTAGCAATAGGTGATGGGGCAAATGATGTTGGCATGCTTCAAGAAGCTGACATAGGG GTTGGCATCAGTGGTGCTGAAGGAATGCAGGCTGTCATGGCTAGTGATGTTGCTGTTGCC CAATTCCGCTTTTTGGAACGGCTACTTCTGGTGCATGGACATTGGTGTTACCGGCGTATT TCAGTGATGATATGCTATTTCTTCTACAAGAATGTTACTTTTGGTGTCACTCTCTTTCTC TACGAAGCATTTGCATCTTTCTCTGGGAAGCCAGCTTATAATGATTGGTTCTTGTCACTC TATAATGTCTTCTTCACCTCCCTTCCTGTCATTGCTTTGGGAGTCTTTGACCAGGATGTG TCTGCCAGGCTATGCATACAGTATCCACAGCTATACCAAGAAGGAGTGCAGAATATATTA TTCAGTTGGTGTCGGATACTTGGCTGGATGCTTAACGGTGTTATGAATGCTGTCTTAATA TTTTTCTTCTGCATCACAACCTTTGAGGACCAGGTGTTCCGCCGGGATGGTCAAGTTGCA GGCTTGGATGCTCTAGGCGTCGCCATGTACACTTGTATTGTATGGGTTGTCAACTGTCAA ATGGCGCTCTCTGTGAACTACTTCACCATAATCCAGCACATATTCATATGGGGCAGCATT GCAGTATGGTACCTCTTCCTCATAGTTTATGGTTCCATGAACCCGAGGTTCTCAACTACA GCCTACATGGTCTTCATCGAACAGCTGGCCCCAGCCCTCTCATTTTGGTTGGTGACACTT TTTGTTGTGCTGGCAACACTTGTCCCCTACTTCACGTATGCCGCGATCCAGATCCGGTTT TTCCCAATGTTCCACAACAAGATTCAGTGGAAGCGGTACTTGGGGAAGGCTGAAGACCCA GAAGTGGCAAGGCAGTTGTCATCACGACACCGGACGTCGTCGCAGCAGAGGATGGTCGGT ATCTCTGCTCGTCGGGACGGCAAGGCTATGCAAATAACAAGGGAGACAGAGATAGAAGTT CAGGAGTAG

Peptide Sequence

PEP ID	Zm00001d045956_P028
PEP Infomation	pep chromosome:B73_RefGen_v4:9:49739756:49744683:1 gene:Zm00001d045956 transcript:Zm00001d045956_T028 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phospholipid-transporting ATPase 9
Sequence	MFKRLAPNGRKYEEETRRHINEYSDSGLRTLVLAYRVLDEKEYKEFNEKLNTAKASVSAD RDVKIEQAADSIEQDLILLGATAVEDKLQQGVPECIDKLAQAGIKIWVLTGDKMETAINI GFACSLLRQDMTQIIVTLEQPDIIALEKDGDKYKIFKASKKKVMSQIEDGIKQIPPSTKI STASFALIIDGKSIPYALEDDVKFKFLDLAINCASVICCRSSPKQKALVTRFVKQVTHKV TLAIGDGANDVGMLQEADIGVGISGAEGMQAVMASDVAVAQFRFLERLLLVHGHWCYRRI SVMICYFFYKNVTFGVTLFLYEAFASFSGKPAYNDWFLSLYNVFFTSLPVIALGVFDQDV SARLCIQYPQLYQEGVQNILFSWCRILGWMLNGVMNAVLIFFFCITTFEDQVFRRDGQVA GLDALGVAMYTCIVWVVNCQMALSVNYFTIIQHIFIWGSIAVWYLFLIVYGSMNPRFSTT AYMVFIEQLAPALSFWLVTLFVVLATLVPYFTYAAIQIRFFPMFHNKIQWKRYLGKAEDP EVARQLSSRHRTSSQQRMVGISARRDGKAMQITRETEIEVQE

Transcript Sequence

Transcript ID	Zm00001d045956_T028
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:49739756:49744683:1 gene:Zm00001d045956 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phospholipid-transporting ATPase 9
Sequence	TATATTGGAGTTCAGTAGCTCAAGGAGACGGATGTCCGTGATAGTCAAAGAACCAGAGGG AAGGATATTACTTCTCAGCAAGGGTGCTGATAGGTTAGTGCTCTATTTACACTAGATTTC AATGTTTAGCTGCAGATCATCTTCATAAGCATAGTTTCTGTGAACAGTGTGATGTTCAAA AGGCTTGCACCAAATGGAAGAAAATATGAAGAAGAAACAAGAAGACACATAAATGAGTAT TCTGACTCTGGTCTAAGAACCTTGGTTCTAGCATACCGTGTCTTAGATGAGAAAGAGTAC AAGGAATTCAATGAAAAACTGAACACTGCCAAAGCATCTGTAAGTGCTGATAGAGATGTA AAAATTGAGCAGGCTGCTGATAGCATTGAACAGGACTTGATTCTTCTTGGTGCTACTGCA GTTGAAGATAAGCTCCAGCAAGGGGTGCCTGAATGCATAGACAAGCTTGCGCAAGCCGGA ATTAAGATATGGGTCCTGACTGGCGACAAGATGGAGACAGCTATCAATATTGGGTTTGCA TGTAGCCTGCTTAGGCAAGACATGACACAGATAATTGTCACACTGGAACAACCTGACATC ATCGCGTTGGAGAAAGATGGTGACAAATATAAAATTTTTAAGGCATCAAAGAAAAAGGTT ATGAGTCAGATAGAGGATGGAATCAAACAAATTCCACCTTCAACTAAAATTAGCACTGCA TCATTTGCACTAATCATTGATGGTAAATCAATACCTTATGCTTTGGAAGATGATGTCAAG TTTAAGTTCTTGGATCTTGCTATCAACTGTGCATCAGTGATATGTTGCCGATCTTCACCA AAACAGAAGGCACTGGTCACAAGATTTGTTAAGCAAGTAACACATAAAGTGACTTTAGCA ATAGGTGATGGGGCAAATGATGTTGGCATGCTTCAAGAAGCTGACATAGGGGTTGGCATC AGTGGTGCTGAAGGAATGCAGGCTGTCATGGCTAGTGATGTTGCTGTTGCCCAATTCCGC TTTTTGGAACGGCTACTTCTGGTGCATGGACATTGGTGTTACCGGCGTATTTCAGTGATG ATATGCTATTTCTTCTACAAGAATGTTACTTTTGGTGTCACTCTCTTTCTCTACGAAGCA TTTGCATCTTTCTCTGGGAAGCCAGCTTATAATGATTGGTTCTTGTCACTCTATAATGTC TTCTTCACCTCCCTTCCTGTCATTGCTTTGGGAGTCTTTGACCAGGATGTGTCTGCCAGG CTATGCATACAGTATCCACAGCTATACCAAGAAGGAGTGCAGAATATATTATTCAGTTGG TGTCGGATACTTGGCTGGATGCTTAACGGTGTTATGAATGCTGTCTTAATATTTTTCTTC TGCATCACAACCTTTGAGGACCAGGTGTTCCGCCGGGATGGTCAAGTTGCAGGCTTGGAT GCTCTAGGCGTCGCCATGTACACTTGTATTGTATGGGTTGTCAACTGTCAAATGGCGCTC TCTGTGAACTACTTCACCATAATCCAGCACATATTCATATGGGGCAGCATTGCAGTATGG TACCTCTTCCTCATAGTTTATGGTTCCATGAACCCGAGGTTCTCAACTACAGCCTACATG GTCTTCATCGAACAGCTGGCCCCAGCCCTCTCATTTTGGTTGGTGACACTTTTTGTTGTG CTGGCAACACTTGTCCCCTACTTCACGTATGCCGCGATCCAGATCCGGTTTTTCCCAATG TTCCACAACAAGATTCAGTGGAAGCGGTACTTGGGGAAGGCTGAAGACCCAGAAGTGGCA AGGCAGTTGTCATCACGACACCGGACGTCGTCGCAGCAGAGGATGGTCGGTATCTCTGCT CGTCGGGACGGCAAGGCTATGCAAATAACAAGGGAGACAGAGATAGAAGTTCAGGAGTAG CATTGTCAGTAGATTTTGCGTTTTGTACAGCTTATAGGATATTGTCTCCGGCAGGATGAC AGCTGAACTGATTGGAAACCGGAATGTTTCTGGATTGCTGCTTCTATGATGGCTGTCATG GAAGCTGATGGTAGAGCAAGACTACAAATTGCTTAGATAGGTCACAACTCACAAGGAGGC CAAGAGATCCTGTTGTAAAGTTCAATTTTAGCAGTTCAAGGCTGTGTTTCCCCCCCCCCC CCCCTGCTTCTCTTACATCATAGATGCTTGTAACCAGATTGGTAGAATTTCGTTGTTTTT ATTCCTCTTTACCCCCCTTGCCTGCCCCCTCTCAACTGTATTTTAAACAATAATGTAAGG CATCTTGTTTGAGTGGCTTT