Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045940_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:48269478:48272847:-1 gene:Zm00001d045940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGGGCATCCACCGCTACACCGCCGAGCTGCTGGTGCTGCTCACCATCATTACCCGC
CTCCTGCTGCTGGCCACGGCGTGGCCGGCATTGCCCGCCCCAGCGTCGCTCGAGCCGTCG
CTGCTTTTCCCGTCCGCCGGCGCCACCTCGCCCACGCAGACCCAGTCAGCCGGGGTCGCC
TCCACAATCCCGGCCTTCCCGGAGCAGTCAGAGGCCGCCGCGGCTGCTGCCACCTCCGTC
TGCCAGCTCACCCCGTCGCCTCCGCTCCTTCCCGCTGTCCTAGCATCGTGCAACGCCAAT
GCCGGCGGGAGTGGCGTGACGCTCCCGCCGCGCCTAAGATGCTGCCCGGCGCTCGCCGCG
TGGCTGTACACTGCGTACGCGCCCACCGCGCTCTCGGGCAGCGGCGTCGGAGAAGCGTCG
GTGGCCGCGTCGGCCGAGGCCGCCGCCGTGGTGGACTTGCCAGTGCTGCCGGACGACGCG
GAGGAATGCGCCGGCGCGGCGGACCGTGCGCTGCGGGCGGCCGGGGTGGCGCTACCGCGG
CCGCATTGGGGCGAAAGCACCGGCACTGGCAACGGAACTGCGGCGTGCGACGTAGCGTTC
TGCTACTGCGGGGTGAGGCTGCGGCGGCCTGCGTGCGCGGCGCCGCAGGGCCGGATGGCA
AGGAGACTGGAGAGGGACTGCGCGCTGCCGGGGCTCGCCGGCTGCTCCAGGTGCCTGCGG
GCGCTCAGCAAGCTGGGTGGGAGGAGCAACGCCACGTCGTCGGCGAAGGCGAAGCAGGAG
CACCGCGAGGACTGCCACCTCATGGGCCTGACATGGCTGCTGAACCGGAACCCCACGCGG
TACCGCGAGGCGGCCACGGCGGTCATCCAGGCGCTCATGGCGGCCGACGAGGCCGGCGCG
GGCCACCCGGCCACCTGCTCGCTCCCCGCCGACGATGAGCTACCAGTGGCCGTTGCCTCC
TCGCAGATTAACGGCGCCACGTCCGCATCGATGTCCTCCGCCCATGGCAGTCTGCTTCTG
GTGGTCCTCGCTGCTGCCGTCATTGTCTTGTCCTGCTGA

Peptide Sequence

PEP ID

Zm00001d045940_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:48269478:48272847:-1 gene:Zm00001d045940 transcript:Zm00001d045940_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPGIHRYTAELLVLLTIITRLLLLATAWPALPAPASLEPSLLFPSAGATSPTQTQSAGVA
STIPAFPEQSEAAAAAATSVCQLTPSPPLLPAVLASCNANAGGSGVTLPPRLRCCPALAA
WLYTAYAPTALSGSGVGEASVAASAEAAAVVDLPVLPDDAEECAGAADRALRAAGVALPR
PHWGESTGTGNGTAACDVAFCYCGVRLRRPACAAPQGRMARRLERDCALPGLAGCSRCLR
ALSKLGGRSNATSSAKAKQEHREDCHLMGLTWLLNRNPTRYREAATAVIQALMAADEAGA
GHPATCSLPADDELPVAVASSQINGATSASMSSAHGSLLLVVLAAAVIVLSC

Transcript Sequence

Transcript ID

Zm00001d045940_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:48269478:48272847:-1 gene:Zm00001d045940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTGATGTGAGCCTTGGAGTGCTAGATTCTGTTTCCATTGTCCATTCTCAGTCACCTGA
GCAGCCGAACGTTCTCAGTCACCTGCAGGTCAGGAACCAACGATGCCGGGCATCCACCGC
TACACCGCCGAGCTGCTGGTGCTGCTCACCATCATTACCCGCCTCCTGCTGCTGGCCACG
GCGTGGCCGGCATTGCCCGCCCCAGCGTCGCTCGAGCCGTCGCTGCTTTTCCCGTCCGCC
GGCGCCACCTCGCCCACGCAGACCCAGTCAGCCGGGGTCGCCTCCACAATCCCGGCCTTC
CCGGAGCAGTCAGAGGCCGCCGCGGCTGCTGCCACCTCCGTCTGCCAGCTCACCCCGTCG
CCTCCGCTCCTTCCCGCTGTCCTAGCATCGTGCAACGCCAATGCCGGCGGGAGTGGCGTG
ACGCTCCCGCCGCGCCTAAGATGCTGCCCGGCGCTCGCCGCGTGGCTGTACACTGCGTAC
GCGCCCACCGCGCTCTCGGGCAGCGGCGTCGGAGAAGCGTCGGTGGCCGCGTCGGCCGAG
GCCGCCGCCGTGGTGGACTTGCCAGTGCTGCCGGACGACGCGGAGGAATGCGCCGGCGCG
GCGGACCGTGCGCTGCGGGCGGCCGGGGTGGCGCTACCGCGGCCGCATTGGGGCGAAAGC
ACCGGCACTGGCAACGGAACTGCGGCGTGCGACGTAGCGTTCTGCTACTGCGGGGTGAGG
CTGCGGCGGCCTGCGTGCGCGGCGCCGCAGGGCCGGATGGCAAGGAGACTGGAGAGGGAC
TGCGCGCTGCCGGGGCTCGCCGGCTGCTCCAGGTGCCTGCGGGCGCTCAGCAAGCTGGGT
GGGAGGAGCAACGCCACGTCGTCGGCGAAGGCGAAGCAGGAGCACCGCGAGGACTGCCAC
CTCATGGGCCTGACATGGCTGCTGAACCGGAACCCCACGCGGTACCGCGAGGCGGCCACG
GCGGTCATCCAGGCGCTCATGGCGGCCGACGAGGCCGGCGCGGGCCACCCGGCCACCTGC
TCGCTCCCCGCCGACGATGAGCTACCAGTGGCCGTTGCCTCCTCGCAGATTAACGGCGCC
ACGTCCGCATCGATGTCCTCCGCCCATGGCAGTCTGCTTCTGGTGGTCCTCGCTGCTGCC
GTCATTGTCTTGTCCTGCTGATCCTAATAGAATGCTTCCAAATCGATGTGTCGCATCGCA
TGGTCTCTTTATTACTACTAGTACGTACCTTTTTTTCTTTGTTCGGTCTAGTTGAGACAA
GATTTAGAATTAAGACGCTGGTTTTGGGTGGACCTCGTTAATGATGTAATTATATATTTG
TTCCTTCGTCTAAGGCTATTTTTAATGGTGGTTTCATGCACATTTAATAGTGTGCCACA