Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045897_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:46367157:46373527:-1 gene:Zm00001d045897 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0061 protein azo1574
Sequence

ATGCCGCCCCAGTTCCCCACCGCCCGCCTCCTCCTCCCTAGTCACAGGCTGCTCCCGCTC
CTCTCCCCTCTCCCCTCCGCGTCCCTGTCCCCTGCTCCTCGCACCCTCCGCCTCCCGCCG
CCGCAGCTTCTTCACCGAGTCGCCCGCCGCCGCCCGCTGCTGCGCGGCATGGCCTCCGCC
GCCGCCCCCGGGTCACACGCCGCCGCGGAAGCGCCCCCCGTCGACGTGGGGGGAGGGGGC
GCTGGCGCCCCGCGGCGGCTCGTCCTGGAGGAGCTACCCTGGGACCATTCCTTCGTCCGC
GAGCTGCCTGGCGACCCGCGATCGGACACTATCCCGCGGGAGGTCCTGCACGCCTGTTAC
TCCAGGGTGTCTCCCTCTGCCAAAGTGGACAACCCCAAGCTGGTTGCGTGGTCTGATTCC
GTGGCCGATCTACTCGATCTGGATCACAAAGAGTTTGAAAGACCTGATTTCCCTCAGTTT
TTCTCAGGAGCAACTCCACTAGTGGGGAGTTTGCCCTACGCACAGTGCTATGGAGGACAT
CAGTTTGGTGTATGGGCTGGTCAGTTGGGGGATGGAAGAGCGATAGCTCTTGGAGAGGTT
GTCAACTCTCGAGGTGAGAGATGGGAGTTGCAGCTCAAAGGTTGTGGAAAGACTCCATAC
AGCAGATTTGCTGATGGTCTTGCTGTCCTACGCAGCAGCATCCGTGAATTCTTATGCAGC
GAAGCCATGCACGGCCTAGGCATTCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGA
AAATCAGTTGTCCGAGATATGTTCTATGATGGCAATGCAAAGGAAGAACCTGGTGCAATA
GTTTGTCGTGTAGCACCGTCTTTTTTACGTTTTGGTTCGTATCAGATACACGCTTCAAGG
GGCAAAGAGGACATTGAGATTGTTCGTCGTTTGGCAGACTACACGATACATCATCACTTT
CCACATCTTGAAAATATGAAAAAGAGTGAAGGTTTGTCATTCGAGACAGCTATAGGAGAT
TCCCCAACAATAGATCTCACATCAAACAAATATGCAGGCAAATATCTTTCTTGGGCAGTT
GAGGTGGCGGAGAGGACTGCTTACTTGATAGCTAGATGGCAAGGTGTTGGCTTCACCCAT
GGTGTACTTAACACTGACAACATGAGTGTGCTGGGCCTAACTATTGATTATGGACCATTT
GGATTTCTCGATGCATTTGATCCTAGCTATACTCCAAATACTACTGATCTTCCTGGGAAG
AGGTACTGTTTTGCAAATCAACCTGATGTTGGCTTGTGGAATATTGCTCAGTTCACTGGA
CCACTGTCCTCTGCTGAACTTATCAGCCAAGATGAGGCAAATTATGTGATGGAGAGGTAT
GGGACAAAGTTCATGGATGAGTACCAATCTATCATGACCAAAAAACTGGGCTTAACTAAG
TATAATAAGCAGCTAATTAGTAAGCTGCTTAGCAACATGGCAGTTGACAAGGTTGACTAT
ACCAACTTCTTCCGTCTTCTTTCGAATGTCAATGCGGATCCTGGTATTCCGGAGAATGAG
CTGCTTGTCCCACTGAAGGCTGCTCTCCTAGATATTGGGAAAGAAAGGAAGGAAGCATGG
ATTAGTTGGGTACAGACTTATATTGAAGAGTCTAACGATGTTGTTCATTCTGTGTGGAAG
CTGGTGGAGAGCGGCGTTCCTGATGAAGAAAGGAAAGCCGCGATGAACTCTGTTAATCCA
AAGTATATTCTCCGCAACTATCTCTGCCAGTCTGCTATCGACGTAGCTGAGCAAGGCGAT
TACGAGGAGGTTCGCCGGGTGCTTAGGGTAATGCATAATCCGTATGACGAGCAGCCGGGA
ATGGAGAAATATGCACGGTTGCCACCAGCTTGGGCATACAGACCTGGAGTGTGCATGCTG
TCCTGCTCCTCGTGA

Peptide Sequence

PEP ID

Zm00001d045897_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:46367157:46373527:-1 gene:Zm00001d045897 transcript:Zm00001d045897_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0061 protein azo1574
Sequence

MPPQFPTARLLLPSHRLLPLLSPLPSASLSPAPRTLRLPPPQLLHRVARRRPLLRGMASA
AAPGSHAAAEAPPVDVGGGGAGAPRRLVLEELPWDHSFVRELPGDPRSDTIPREVLHACY
SRVSPSAKVDNPKLVAWSDSVADLLDLDHKEFERPDFPQFFSGATPLVGSLPYAQCYGGH
QFGVWAGQLGDGRAIALGEVVNSRGERWELQLKGCGKTPYSRFADGLAVLRSSIREFLCS
EAMHGLGIPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRVAPSFLRFGSYQIHASR
GKEDIEIVRRLADYTIHHHFPHLENMKKSEGLSFETAIGDSPTIDLTSNKYAGKYLSWAV
EVAERTAYLIARWQGVGFTHGVLNTDNMSVLGLTIDYGPFGFLDAFDPSYTPNTTDLPGK
RYCFANQPDVGLWNIAQFTGPLSSAELISQDEANYVMERYGTKFMDEYQSIMTKKLGLTK
YNKQLISKLLSNMAVDKVDYTNFFRLLSNVNADPGIPENELLVPLKAALLDIGKERKEAW
ISWVQTYIEESNDVVHSVWKLVESGVPDEERKAAMNSVNPKYILRNYLCQSAIDVAEQGD
YEEVRRVLRVMHNPYDEQPGMEKYARLPPAWAYRPGVCMLSCSS

Transcript Sequence

Transcript ID

Zm00001d045897_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:46367157:46373527:-1 gene:Zm00001d045897 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0061 protein azo1574
Sequence

ATGCCGCCCCAGTTCCCCACCGCCCGCCTCCTCCTCCCTAGTCACAGGCTGCTCCCGCTC
CTCTCCCCTCTCCCCTCCGCGTCCCTGTCCCCTGCTCCTCGCACCCTCCGCCTCCCGCCG
CCGCAGCTTCTTCACCGAGTCGCCCGCCGCCGCCCGCTGCTGCGCGGCATGGCCTCCGCC
GCCGCCCCCGGGTCACACGCCGCCGCGGAAGCGCCCCCCGTCGACGTGGGGGGAGGGGGC
GCTGGCGCCCCGCGGCGGCTCGTCCTGGAGGAGCTACCCTGGGACCATTCCTTCGTCCGC
GAGCTGCCTGGCGACCCGCGATCGGACACTATCCCGCGGGAGGTCCTGCACGCCTGTTAC
TCCAGGGTGTCTCCCTCTGCCAAAGTGGACAACCCCAAGCTGGTTGCGTGGTCTGATTCC
GTGGCCGATCTACTCGATCTGGATCACAAAGAGTTTGAAAGACCTGATTTCCCTCAGTTT
TTCTCAGGAGCAACTCCACTAGTGGGGAGTTTGCCCTACGCACAGTGCTATGGAGGACAT
CAGTTTGGTGTATGGGCTGGTCAGTTGGGGGATGGAAGAGCGATAGCTCTTGGAGAGGTT
GTCAACTCTCGAGGTGAGAGATGGGAGTTGCAGCTCAAAGGTTGTGGAAAGACTCCATAC
AGCAGATTTGCTGATGGTCTTGCTGTCCTACGCAGCAGCATCCGTGAATTCTTATGCAGC
GAAGCCATGCACGGCCTAGGCATTCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGA
AAATCAGTTGTCCGAGATATGTTCTATGATGGCAATGCAAAGGAAGAACCTGGTGCAATA
GTTTGTCGTGTAGCACCGTCTTTTTTACGTTTTGGTTCGTATCAGATACACGCTTCAAGG
GGCAAAGAGGACATTGAGATTGTTCGTCGTTTGGCAGACTACACGATACATCATCACTTT
CCACATCTTGAAAATATGAAAAAGAGTGAAGGTTTGTCATTCGAGACAGCTATAGGAGAT
TCCCCAACAATAGATCTCACATCAAACAAATATGCAGGCAAATATCTTTCTTGGGCAGTT
GAGGTGGCGGAGAGGACTGCTTACTTGATAGCTAGATGGCAAGGTGTTGGCTTCACCCAT
GGTGTACTTAACACTGACAACATGAGTGTGCTGGGCCTAACTATTGATTATGGACCATTT
GGATTTCTCGATGCATTTGATCCTAGCTATACTCCAAATACTACTGATCTTCCTGGGAAG
AGGTACTGTTTTGCAAATCAACCTGATGTTGGCTTGTGGAATATTGCTCAGTTCACTGGA
CCACTGTCCTCTGCTGAACTTATCAGCCAAGATGAGGCAAATTATGTGATGGAGAGGTAT
GGGACAAAGTTCATGGATGAGTACCAATCTATCATGACCAAAAAACTGGGCTTAACTAAG
TATAATAAGCAGCTAATTAGTAAGCTGCTTAGCAACATGGCAGTTGACAAGGTTGACTAT
ACCAACTTCTTCCGTCTTCTTTCGAATGTCAATGCGGATCCTGGTATTCCGGAGAATGAG
CTGCTTGTCCCACTGAAGGCTGCTCTCCTAGATATTGGGAAAGAAAGGAAGGAAGCATGG
ATTAGTTGGGTACAGACTTATATTGAAGAGTCTAACGATGTTGTTCATTCTGTGTGGAAG
CTGGTGGAGAGCGGCGTTCCTGATGAAGAAAGGAAAGCCGCGATGAACTCTGTTAATCCA
AAGTATATTCTCCGCAACTATCTCTGCCAGTCTGCTATCGACGTAGCTGAGCAAGGCGAT
TACGAGGAGGTTCGCCGGGTGCTTAGGGTAATGCATAATCCGTATGACGAGCAGCCGGGA
ATGGAGAAATATGCACGGTTGCCACCAGCTTGGGCATACAGACCTGGAGTGTGCATGCTG
TCCTGCTCCTCGTGA