Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045804_T019
CDS Infomation

cds chromosome:B73_RefGen_v4:9:40102959:40107977:-1 gene:Zm00001d045804 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-CO-like-transcription factor 6 description:Zinc finger protein CONSTANS-LIKE 9
Sequence

ATGGGCGCTCTCTGTGATTTCTGTGGGGAGCATAGGTCTATGGTTTACTGCCGATCAGAT
GCAGCATCCTTGTGTTTATCATGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGG
CGTCATACAAGGACACTTTTATGTGACCGGTGTGCTTCACAGCCTGCTATGGTCCGCTGT
CTAGCAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGCCACATTGCAGGATCC
TCATCTGCCGGACACAAAAGGCAGACTATAAATTGCTATTCAGGATGTCCATCGTCTGCA
GAACTTTCTAGAATATGGTCCTTCGTTTCAGATATTCCTAATGTAGCACCTGAGCCAAAC
TGTGAGCAAGGAATAAGCATGATGAGCATCAGCGACAGTGGTGTCAGTAATCAAGATAAT
GCTGCAGGGGACAGTATTTTGTTAGATATAGCTAGTGCAACACTTGTAAGTGATATTGGT
ACTTGTGACAAGCTTTTGGTAGGTTCCTCTTCAGGAGCTGGAGTGAACCTACTTCCACTG
GCTACTGGTCAAACAGAAACAGCTGGATCTGTGGATTCCACACCAGATAAGGATTCCTGT
ATGCAGGTTCCCTATACGCCAGATAAAGATATGTTCAGTAAGGACAGCATATATGAAGAT
TTTTGTGTGGATGACGCTGACCTTGCTTTCGAAAATTATGAAGAACTCTTTGGTACCTCT
CATATTCAAACAGAACAACTCTTTGATGATGCTGGAATAGACATTTACTTTGAAATGAAG
GAAGCACCTGCTGGGAATTCCACTGAGCAGTCCAAGCTGAAGCAACCTGCAAATAGCAAT
GCGGTATCTGCCGACTCTGGGATGTCGAACCCTGGAGTGAAAGCCTCCTGGCCCCGAGGG
CTCAATTGCTGGAGGTAG

Peptide Sequence

PEP ID

Zm00001d045804_P019
PEP Infomation

pep chromosome:B73_RefGen_v4:9:40102959:40107977:-1 gene:Zm00001d045804 transcript:Zm00001d045804_T019 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-CO-like-transcription factor 6 description:Zinc finger protein CONSTANS-LIKE 9
Sequence

MGALCDFCGEHRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCASQPAMVRC
LAENASLCQNCDWNGHIAGSSSAGHKRQTINCYSGCPSSAELSRIWSFVSDIPNVAPEPN
CEQGISMMSISDSGVSNQDNAAGDSILLDIASATLVSDIGTCDKLLVGSSSGAGVNLLPL
ATGQTETAGSVDSTPDKDSCMQVPYTPDKDMFSKDSIYEDFCVDDADLAFENYEELFGTS
HIQTEQLFDDAGIDIYFEMKEAPAGNSTEQSKLKQPANSNAVSADSGMSNPGVKASWPRG
LNCWR

Transcript Sequence

Transcript ID

Zm00001d045804_T019
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:40102959:40107977:-1 gene:Zm00001d045804 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-CO-like-transcription factor 6 description:Zinc finger protein CONSTANS-LIKE 9
Sequence

GCCTGCCCTCAGACTTCCTCTTTCTTCCCCTTCTCAGCCTTTCCCTCTCTTCTCTGCTCT
TTGCATCTCTCTCTTGTTCCTCCCTTCCTCTCTCTAAAAAAGGGTTCTGATCCCTTTCTA
GAAGCTCCTGGGTTTCTGTTGCCGACCCGAGCTCCCCAGGGGCGCTCAGGAGGCGCCGAG
CCGGCGACCGCTCCGGCGGATCTGAGGAGCCGCCGCGGTCGCTTTGCCTCCGGTTCCTTG
TAAACTATTGATTGGGAAACACTCTGAAGAAGAGTTTGTTGGCTGCATAACATCTCCTGA
AGCTGGTTTGAAGTTTGCTGATAGGAAAGATCATGGGCGCTCTCTGTGATTTCTGTGGGG
AGCATAGGTCTATGGTTTACTGCCGATCAGATGCAGCATCCTTGTGTTTATCATGTGACC
GTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGTCATACAAGGACACTTTTATGTGACC
GGTGTGCTTCACAGCCTGCTATGGTCCGCTGTCTAGCAGAAAATGCCTCGCTTTGCCAAA
ATTGTGATTGGAATGGCCACATTGCAGGATCCTCATCTGCCGGACACAAAAGGCAGACTA
TAAATTGCTATTCAGGATGTCCATCGTCTGCAGAACTTTCTAGAATATGGTCCTTCGTTT
CAGATATTCCTAATGTAGCACCTGAGCCAAACTGTGAGCAAGGAATAAGCATGATGAGCA
TCAGCGACAGTGGTGTCAGTAATCAAGATAATGCTGCAGGGGACAGTATTTTGTTAGATA
TAGCTAGTGCAACACTTGTAAGTGATATTGGTACTTGTGACAAGCTTTTGGTAGGTTCCT
CTTCAGGAGCTGGAGTGAACCTACTTCCACTGGCTACTGGTCAAACAGAAACAGCTGGAT
CTGTGGATTCCACACCAGATAAGGATTCCTGTATGCAGGTTCCCTATACGCCAGATAAAG
ATATGTTCAGTAAGGACAGCATATATGAAGATTTTTGTGTGGATGACGCTGACCTTGCTT
TCGAAAATTATGAAGAACTCTTTGGTACCTCTCATATTCAAACAGAACAACTCTTTGATG
ATGCTGGAATAGACATTTACTTTGAAATGAAGGAAGCACCTGCTGGGAATTCCACTGAGC
AGTCCAAGCTGAAGCAACCTGCAAATAGCAATGCGGTATCTGCCGACTCTGGGATGTCGA
ACCCTGGAGTGAAAGCCTCCTGGCCCCGAGGGCTCAATTGCTGGAGGTAGTAGAGACAGT
GCACTCACACGATACAAGGAGAAGAAAATGAGAAGAAAGTTCGACAAGAAAATCAGGTAC
GCTTCTCGTAAGGCTAGAGCAGATGTGCGAAAGAGGGTAAAGGGTCGGTTTGTTAAGGCT
GGTGAAGCATATGACTATGATCCTCTCTGCCAAACGAGGAGTTACTGAAGCATATGATCT
TTATCCAGTTTTAAATTAGCAAACTGCAACCAAGGCTCGTTGCAGCTAGAACAAAAGCAC
TGGCAATCCAAGCTATTGGGCCAAACTGTGCCTT