Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045800_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:9:39937307:39947203:1 gene:Zm00001d045800 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 and GRAM domain-containing protein
Sequence	ATGAGGCTGGTGGTGCGCGTCATCGAGGCGCGGGGCCTCCCGCCCACGGACGCCGACGGG ACACGGGAGCCCTACGCCAAGGCGCAGCTCGGGAAGCAGCGGGCCAAGACCAAGGTGATG CGCAAGACGCTCTGCCCCGTCTGGGACGAGGAGTTCACCTTCCGGGTAGGGGACCTCAGT GACAACCTCCTCGTCTCCGTGCTCGACGAGGACCGCTATTTCGCCGACGACGTCCTCGGC CAGGTCAAGGTGCCCCTCACCGCCGTGCTCGACGCCGACAACCGCACGCTCGGGATGCAG TGGTACCAGCTGCAGCCCAAGAGCAAGAAGTCCAAGCTCAAGGATTGCGGAGAGATTCAT CTCAGCGTTTCTCTGGCTCAAAACTACTCCGACGAGACAACGGCACATTGGGCCTCAGAT GACCATGACCTTGCATCGAATTCAGACAAATCAACTGAACTGGTGAAAGGATCTTCTTTC TCAAATATTCCTATAGAGGTACGCACACAAGTATCAGAGGTCGATGAGACAGAAGTTGCC AAGGAGGATAAATCAAACGCTGCCCCATCATTTGTCAACAAGCTATATCAAATGTTTAAT AGTAAACCAAAAGATGCAGAAGCTTCTGCTCCATCTTCCTCCAAGTTGAACGACGCTTCA GATATTACCGAAGAAATGCTGTCAACCAACTCTGAAGCTCCTGATAAGCAGGATCTTGAT GCCAGTGCATCTATGTCCTTCGATGAGCTACTGAAGGCCTTTGGTTCTCGAGGTGAAGGG AAAGAAATGCCTGAAAATTTGTCAGGTGGAGTTGTTCTTGATCAAGTTTATGCTGTTGCA CCGAGTGATTTGAACACACTTCTTTTCTCTCCAAGTTCAGACTTTCTGCAATCACTTGCA GAGATTCAAGGAACTACAGGTCTTGAAATTCAACAGTGGCGACTTGAAAATGACGGTGAA ATCCTGAGGAGGGTGGTAAGCTACACAAAAGCTCCTACCAAACTAGTTAAGGCTGTGAAA GCAACAGAAGACATGACATATTTGAAGGCAGACAGAGAGATGTTTGCAGTTTTAGCAGAT GTTAGTACTCCTGACGTTCCTTTTGGCAATACTTTCAGAGTTGAGGTTTTGACCTGTATA ATACCAGGACCTGAACTACCAGATGACGAAAAATCTTCACGACTTATGGTCTCTTGGCGC ATAAATTTTGTCCAAAGCACCATGATGAAGAGCATGGTTGAAAATGGAGCAAAACAAGGC TTAAAGGATAACTATGTTCAATTCTCTGAGCTGCTGGCTAAAAATTTTAGGCCAGTTGAT GCAAAAGATACAACATACAGTAATGAAGTCCTTTCTTCTGTGCAACCAGAGCAAGAATCT GACTGGAAGCTAGCGTTTCGAGTATTTGGAAATTTCACACTTTTTTCCTCAGTTTTTGCA TTTGTTTATGTTTCTGCACACATCTTCCTTACAAGCCCTAGTATAATTCAAGGTCTTGAG TTCCCGGGCCTGGACTTGCCGGATTCTGTTGGTGAAGTTGTAGTTTGTGGAGTTCTTATT CTACAAGGACAGCGTGTGCTAAATATGGTTGCACGATTCATCCAGGCGAAGAGGCAGATC ATGGAGTTAAAGCACAAGGGGATGGCTGGTTATTGA

Peptide Sequence

PEP ID	Zm00001d045800_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:9:39937307:39947203:1 gene:Zm00001d045800 transcript:Zm00001d045800_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 and GRAM domain-containing protein
Sequence	MRLVVRVIEARGLPPTDADGTREPYAKAQLGKQRAKTKVMRKTLCPVWDEEFTFRVGDLS DNLLVSVLDEDRYFADDVLGQVKVPLTAVLDADNRTLGMQWYQLQPKSKKSKLKDCGEIH LSVSLAQNYSDETTAHWASDDHDLASNSDKSTELVKGSSFSNIPIEVRTQVSEVDETEVA KEDKSNAAPSFVNKLYQMFNSKPKDAEASAPSSSKLNDASDITEEMLSTNSEAPDKQDLD ASASMSFDELLKAFGSRGEGKEMPENLSGGVVLDQVYAVAPSDLNTLLFSPSSDFLQSLA EIQGTTGLEIQQWRLENDGEILRRVVSYTKAPTKLVKAVKATEDMTYLKADREMFAVLAD VSTPDVPFGNTFRVEVLTCIIPGPELPDDEKSSRLMVSWRINFVQSTMMKSMVENGAKQG LKDNYVQFSELLAKNFRPVDAKDTTYSNEVLSSVQPEQESDWKLAFRVFGNFTLFSSVFA FVYVSAHIFLTSPSIIQGLEFPGLDLPDSVGEVVVCGVLILQGQRVLNMVARFIQAKRQI MELKHKGMAGY

Transcript Sequence

Transcript ID	Zm00001d045800_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:39937307:39947203:1 gene:Zm00001d045800 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 and GRAM domain-containing protein
Sequence	ATTCTCTTCTCTCCGGCTCTCCCGGATTCCTTCTCCCTCATGCATTTCTTGGCCCCGGCC AGCGGGCAGTGATATCGCTCCCTCGTCCGTCTGATACTTTGTCGTCCATTGTTTTTTTTT CAATCCCAAGTGTTCATCAGCTCCAGTTCCCAACCTGAGCAGCAGCAATCAGAAGAGAAG GCGAGAAAGGAAACCGGGTTGTTTCGGTTCCATTTTGATTCGACTGGAGGAGATATACGC ACACCCAAATCGAATACATAGTAGGGGGGATGAGGCTGGTGGTGCGCGTCATCGAGGCGC GGGGCCTCCCGCCCACGGACGCCGACGGGACACGGGAGCCCTACGCCAAGGCGCAGCTCG GGAAGCAGCGGGCCAAGACCAAGGTGATGCGCAAGACGCTCTGCCCCGTCTGGGACGAGG AGTTCACCTTCCGGGTAGGGGACCTCAGTGACAACCTCCTCGTCTCCGTGCTCGACGAGG ACCGCTATTTCGCCGACGACGTCCTCGGCCAGGTCAAGGTGCCCCTCACCGCCGTGCTCG ACGCCGACAACCGCACGCTCGGGATGCAGTGGTACCAGCTGCAGCCCAAGAGCAAGAAGT CCAAGCTCAAGGATTGCGGAGAGATTCATCTCAGCGTTTCTCTGGCTCAAAACTACTCCG ACGAGACAACGGCACATTGGGCCTCAGATGACCATGACCTTGCATCGAATTCAGACAAAT CAACTGAACTGGTGAAAGGATCTTCTTTCTCAAATATTCCTATAGAGGTACGCACACAAG TATCAGAGGTCGATGAGACAGAAGTTGCCAAGGAGGATAAATCAAACGCTGCCCCATCAT TTGTCAACAAGCTATATCAAATGTTTAATAGTAAACCAAAAGATGCAGAAGCTTCTGCTC CATCTTCCTCCAAGTTGAACGACGCTTCAGATATTACCGAAGAAATGCTGTCAACCAACT CTGAAGCTCCTGATAAGCAGGATCTTGATGCCAGTGCATCTATGTCCTTCGATGAGCTAC TGAAGGCCTTTGGTTCTCGAGGTGAAGGGAAAGAAATGCCTGAAAATTTGTCAGGTGGAG TTGTTCTTGATCAAGTTTATGCTGTTGCACCGAGTGATTTGAACACACTTCTTTTCTCTC CAAGTTCAGACTTTCTGCAATCACTTGCAGAGATTCAAGGAACTACAGGTCTTGAAATTC AACAGTGGCGACTTGAAAATGACGGTGAAATCCTGAGGAGGGTGGTAAGCTACACAAAAG CTCCTACCAAACTAGTTAAGGCTGTGAAAGCAACAGAAGACATGACATATTTGAAGGCAG ACAGAGAGATGTTTGCAGTTTTAGCAGATGTTAGTACTCCTGACGTTCCTTTTGGCAATA CTTTCAGAGTTGAGGTTTTGACCTGTATAATACCAGGACCTGAACTACCAGATGACGAAA AATCTTCACGACTTATGGTCTCTTGGCGCATAAATTTTGTCCAAAGCACCATGATGAAGA GCATGGTTGAAAATGGAGCAAAACAAGGCTTAAAGGATAACTATGTTCAATTCTCTGAGC TGCTGGCTAAAAATTTTAGGCCAGTTGATGCAAAAGATACAACATACAGTAATGAAGTCC TTTCTTCTGTGCAACCAGAGCAAGAATCTGACTGGAAGCTAGCGTTTCGAGTATTTGGAA ATTTCACACTTTTTTCCTCAGTTTTTGCATTTGTTTATGTTTCTGCACACATCTTCCTTA CAAGCCCTAGTATAATTCAAGGTCTTGAGTTCCCGGGCCTGGACTTGCCGGATTCTGTTG GTGAAGTTGTAGTTTGTGGAGTTCTTATTCTACAAGGACAGCGTGTGCTAAATATGGTTG CACGATTCATCCAGGCGAAGAGGCAGATCATGGAGTTAAAGCACAAGGGGATGGCTGGTT ATTGACTGTTGCTCTCATGGAGGGAACTAACATGGCAGCAACCAAATCATCTGATTACTC TGATCCATATGTTGTATTTACATGCAATGGGAAGACAAAGACAAGTTCGATTAAGTTTCA CACCCTCGAGCCTCAGTGGAATGAAATTTTTGAGTTTGACGCCATGGAAGATCCTCCATC AGTGATGGAAATACATGTGTATGATTTCGATGGACCGTTCGACAAAGTTGCCTCCCTTGG TCATACTGAAGTGAATTTCTTGAAATATAATAATATATCCAAGCTTGCTGACATTTGGAT TCCTCTGAAAGGAAAGCTTGCTCAAGCATGTCAGTCAAAATTGCATCTAAGAATTTTCTT AAACAATACAAGGGGTACTGAAGTAGTGAAGGATTACCTGGACAAAATGGAGAAAGAAGT TGGCAAAAAGATTGCTATGAGGTCCCCACACACAAACTTAGCATTCCAGAAAATATTTTC TTTGCCACCAGAAGAATTTCTTATCAATTATTTTACTTGTCACTTAAAGAGGAAAATGCT AACACAGGGTCGTCTTTTTCTATCTCCAAGAATATTTGGGTTTTACACAAATATTTTTGG CCACAAAACAAAATTCTTCTTACTTTGGGAAGATATTGAAGACATTTTACTGGTCCCTGC AACCCTATCCTTAATGGGAAGTCCATCTCTGGTGATTATTCTTCGAAAGGGCAGAGGAAT GGATGCAAAGCATGGCGCAAAGCAACTGGACAGTCAAGGGAGACTAAACTTCCATTTCCA ATCTTTTGTCTCATTCAATGTGGCACATAAAACAATAACGGCACTGTGGAAGGCAAGGTC CTTGACCCCTGAACAAAAGGTAGAGCTTGTAGAAGAGGAATCAGAAACAGAAGAGTTCCA AAACGTGGAAGGAGAATCTTTCTTAGGGATAGAGGATGCCCAAATGTCAGGAGTGTTCTC ATCCACAAAACCTTTTGATGTAACAACACTCATGGGCATATTTGAGGGTGGTCCTTTGGA GTGCCGGGTGATGGAGAAAGTTGGCTGTATGGACTACTCTGTTACAGCATGGGAACCTGT CAGAGCTGATATTTACCAGAGGCAAGTTCATTATAAATTTGACAAGAAATCAGTACGGCA TGGAGGAGAAGCGATGAGCACTCAGCAGAAGTCCCCTTTGCCTAATAAGAATGGCTGGCT TGTTGAAGAAGTGATGACGCTTGAAGGTATCCCTGTTGGTGAATGTTTCAATCTCCATAT TCGATACCAACTAGAGAACAATGTATCCAAGCAGAAGACTTGCACTATCCAGGTATCTAT TGGCATAGTATGGTTAAAGAACTGCAAGAACCGAAAAAAGATCACGCATGATATAGCAAC CAATGCATCTTCTCGCCTGAAGAAGATATTCAGCCAATTTGAGAAGGAACCTATACCAGC AAAGTAGGAACCTTGTTTTTGTCTGCGTCCTACTTTTGCTGCTGCACATATGCTAGCACT ATGTATTTTCTTGCTGCCCATGCTGAGCAAAGATCAGGGACATAGTGAGGAAGTTGCAAC CCAAGGCAAAGCCCTCAAGAAGACTTTTATAAAGCAACCGTATTGCAAGATTTTAGATTA GAGAACTGTACAGCCTGGAATGTGGTTTAGCTTAACCATGTATACATAACATTCAAACAT TGTTTTTGACTTCTACAAAAAGGTAAGAGGATATGAATTTCTGAATCTTGCCTACACACC CTTTTAGTTAGATTGGAAGTAAACATGTTGTTCGCTTTGGATTAAAACCATTTGTTTTGA CTGCTACAGCTACAATCCATAAAGACAAAACACTATAAAAGCACAACAAGTAGGTACTGA TTAAAGCTAAGTGCTAACTAATCCTTGTTAGCTTTTGGATGTACCTAAACTTGCAAAAAC CTTCAAATTATCTCTTACCCTATTTTGAAGGTGGTTTTCTTTTTTAGTTAAAAATGGTGA TGTTGGGGGCCTTCGGCTTCCGAAGGTCCTCAAAAACGTGATTTGACAATGTTTTCTAAG TATGCGAGCAGGTATCTTCAGAATCAGGAATTAGGTTGCGGGTATACAGAAGCATGGTCA AGACGAAGCT