Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045783_T087
CDS Infomation	cds chromosome:B73_RefGen_v4:9:38798847:38813545:-1 gene:Zm00001d045783 gene_biotype:protein_coding transcript_biotype:protein_coding description:binding
Sequence	ATGGCGGCCGCGGAGCAGCTGAAGGAGCTGGGGGAGAAGCTGCAGGCGGTGGCGCCGGCT CCTGCGGACGAACTCGCCAAGCTCCTCGAGAAAGCTGTGGAATGCTTACGTGGAATAGAG CAATCACCGGGGTCCTCAGTGATGGAAGCTATTCAACCAAGTCTTAAGGCTGTTACCAGA GAAGAATTGCTGAAGCATGAGGATGACAATGTCAAAGTTCTCTTGGCAACATGTTTCTGT GAAATTACAAGAATAACTGCACCTGATGCTCCCTACAACGATGACATTTTAAGGGATATA TTCTATCTGATTGTGGGTACATTTGGCGGACTCAGTGATGTTAATAGTCAATCCTTTGGC AGGAGAGTTGCTATTCTTGAAACAGTTGCTAGATACCGAGCATGTGTTGTGATGTTAGAT CTTGAATGTGATGATCTTATTACAAACATGTTTCAAACATTTTTAGGAGTTGTCAGCGAC AGTCATGAAGAAAACATTGTAAAGTCAATGCAGGCAATAATGATCCTTATTATAGATGAG AGTGAAGATGTACAGGAGAGTCTTCTACGTGTACTGCTGTCAGCATTGGGGCAGAAAAAA ACTGGTGCTGCAATGTCTGCTCGTAAACTTGCTCGCAGTGTCATTGAGCATTCCGCTACA AAGCTTGAACCTTACATAAAGAAGTTTCTAACGTCATCATGGGCTGGGAATGGCAGTTCT TCTAATGATCAAATTGATCACCAGGGAGTTGTATTTGATTTATATCAGTGTGCTCCGAAG GTTCTTAAGGCGATCGTGCCGTATATTACTGGGGAGCTACTGGCAGATGAAGTAGATAAC AGGTCTAAGTCAGTTGAATTACTTGGGGAAATTTTTTCCTTACCTGGAGCCTCTATTGTG GAATGTTTCAAGACTCTTTTCACAGAATTCCTCAAGAGACTGACTGATAGAGTTGTTGAA ATCCGTATTTCTGTGGTTGAGTATTTGAAGAGATGTCTAATATCAAATCCTTCCAGAGCT GAAGCTCCTGAAATCATCAAGGCACTTTGTGACAGATTGTTGGATTATGAAGAAAATGTG CGGAAGGGAGTGGTGGCTGCACTTTGTGATGTAGCTACCCATTCTCCTTATGCTATTCCA ATTGATACAATTAAAGTAGTAGCAGAGCGTGTCCGCGATAAATCGCAGGCTGTGAAGTGC TATACCATGGAGAGGTTGGCAGATATTTACAAGCTGTACTGCCAGAGGGATTCTGATAGC TCAACAAATTCTGATGATTTTGAGTGGATACCTGGAAAAATATTAAGATGTCTTTATGAC AAAGAGTTTAGGCCAGAGTCAATCGACTCTATTTTGAGTGGTTCATTGTTCTCACCAGAG TACCAAATGAAGGGAAGAGTGAAACATTGGATTACAGCTGCGACATACTTCGATAAAGTT GAGATGAAAGCCCTTGAACAAATTCTCCTGCACAAGCAAAGACTGCAACAAGAAATGCTG AAATACATATCGCTTCGGGAACCAAGCCAGGAAGATGCCCCTGATCTGCAAAAAAGAATC TTTGGATGTTTCCGGAACATCTCTCGCTTATTTAGTGACTCCGCGAAGTGCGAGGAGAAC TTGAACATGCTTCATCAGCTAAAAGATGCCGATTTCTGGAAAATATTCACTAGCCTGCTT AATTGTTCAACTACATTTGAGAAGGCTTGGTCTCTTCGGGCAGAGTTGCTTAAGATACTT GGTGAAAACCATGTGCTTTATAATTTTGTTGGCACATTAACAATGAGATGTTCATATTTA CTTGTAAACAAGGAGTATGCAAAAGAGATCCTTGCAGAAGCTTCTGCACAGAAGACTTCT GGGAATACAAAACTCATCTCATCGTGCATGAATCTTCTAACGGCAATATCTAGTTTCTTT CCATCTCTTTTGGCTGGACTTGAAGAAGACATTGTTGAACTCCTGAAAGAGGATAATGAA GTGCTTAAAGAGGGTATTGCACATGTGTTATCAAAGGCTGGTGTCAATATTCGTGAACAG TTAGCCTCAACAAGTTCCCTTGATCTTCTATTAGAGCGTTTATGCTTAGAGGGTACGCGG AGGCAGGCTAAATACTCTGTTCATGCACTTGCTGCCATTACAAAAGATGATGGTCTTATG TCACTATCTGTTCTTTACAAGAGGCTTGTGGATTTGTTGGAAGAGAAGAAAGTGAATATA CCATCTATCTTGCAATCTTTGGGTTGTATAGCCCAAATAGCGATGCCGATTTTTGAAACA CGGAAAGAAGAGATATTAAGTTTCATAATTAAAAAAATTCTTGACTGCAATGATGATATG GTTCAAAATTCTTCTAATAAATCTGAATGGGGTGATAGTACACATAATTGTTTGCTGAAG ATTTATGGCATCAAAACTTTGGTGAAGAGCTATATACCTTGCAAGGATGCTCATGCACAG CCAGGAATAGAGAAGTTAATTGATATTCTGAAGAATATTCTTACCTATGGTGATATATCT CCAAATATGGTCTCAAGTGCTGCTGATAAGGCCCATTTGAGGCTTGCAGCAGCAAAAGCT GTTCTCCGCTTATCAAAACAATGGGACCATAAAGTGCCTGTTGATGTATTTTATTTGACT TTGAGGATTTCACAGGACGATTTTCCTCAGGTGAGGAAATTATTTCTTTGTAAAGTACTT CAATATATCAAGGAAAGGGCCTTGGATGCAAAATATGCTTGCGCCTTCATGTTTGGTGTT AACGATTATCATGGCCCACAGTTAGAAGAGTTCAAGTACAATCTGACTGAAGTGGTTCAG ATATGCCAACAAGTTAAGATGCGCCAACTTTCAGTCCAAGCAGATATGAATTTGTTGACG GCTTACCCAGAATATATAATTTCCTTTTTGGTTCATGCCCTTGCTCATGATCCTTCATCC CCGGACATTGAAGAACATGAAAATGTCAAAGCATTTGGTCCAACTTACTGGCGACTTTAC CTGATTCTTTCAATCCTCCTGGGGGAAGAAGGTTTGCAACATAGTGTTCCAGGCATGAAA AAGGATAGCTTCACTACAATAATATCTATATTCAAAAGTATCAAATCTTCACAGGATGTG GTTGATGGAAATAAGAACAAGACTCTGTGGGCTATATGTGATCTTGGTACTCTTATTGCA AAGAGGCTATGCCAAGACCAAACGAGTTTATCAGAAGCTCAAACCGTTCCATTGCCTCCC CAACTTTATGCACCGCTTCAGGATAACCAAAATGAAAATTCTGTGGAGAGTTATGGGCAG ATTTGGCCGGGATGTGAGAAAGTACTGGCTCATTTTGAGGCTGTAATGACTGCAAACATG GATAAGGTTGAATCTCCCAAACATAAGATGCTTATTGATATGACTGATGAATTTGGAAAT GAAGTTCCTCTTGGGAAAATTGTCAAACTTCTTAAATTGCGAGGAGAAAAGAAGGCGGAG AAAAAGCAGAAGGCACCATCTAGTAGTTCAGTAAATGCCGAGAACGATGATGATGTCCTG GGTTTAGTAAGAGAAATTAACTTG

Peptide Sequence

PEP ID	Zm00001d045783_P087
PEP Infomation	pep chromosome:B73_RefGen_v4:9:38798847:38813545:-1 gene:Zm00001d045783 transcript:Zm00001d045783_T087 gene_biotype:protein_coding transcript_biotype:protein_coding description:binding
Sequence	MAAAEQLKELGEKLQAVAPAPADELAKLLEKAVECLRGIEQSPGSSVMEAIQPSLKAVTR EELLKHEDDNVKVLLATCFCEITRITAPDAPYNDDILRDIFYLIVGTFGGLSDVNSQSFG RRVAILETVARYRACVVMLDLECDDLITNMFQTFLGVVSDSHEENIVKSMQAIMILIIDE SEDVQESLLRVLLSALGQKKTGAAMSARKLARSVIEHSATKLEPYIKKFLTSSWAGNGSS SNDQIDHQGVVFDLYQCAPKVLKAIVPYITGELLADEVDNRSKSVELLGEIFSLPGASIV ECFKTLFTEFLKRLTDRVVEIRISVVEYLKRCLISNPSRAEAPEIIKALCDRLLDYEENV RKGVVAALCDVATHSPYAIPIDTIKVVAERVRDKSQAVKCYTMERLADIYKLYCQRDSDS STNSDDFEWIPGKILRCLYDKEFRPESIDSILSGSLFSPEYQMKGRVKHWITAATYFDKV EMKALEQILLHKQRLQQEMLKYISLREPSQEDAPDLQKRIFGCFRNISRLFSDSAKCEEN LNMLHQLKDADFWKIFTSLLNCSTTFEKAWSLRAELLKILGENHVLYNFVGTLTMRCSYL LVNKEYAKEILAEASAQKTSGNTKLISSCMNLLTAISSFFPSLLAGLEEDIVELLKEDNE VLKEGIAHVLSKAGVNIREQLASTSSLDLLLERLCLEGTRRQAKYSVHALAAITKDDGLM SLSVLYKRLVDLLEEKKVNIPSILQSLGCIAQIAMPIFETRKEEILSFIIKKILDCNDDM VQNSSNKSEWGDSTHNCLLKIYGIKTLVKSYIPCKDAHAQPGIEKLIDILKNILTYGDIS PNMVSSAADKAHLRLAAAKAVLRLSKQWDHKVPVDVFYLTLRISQDDFPQVRKLFLCKVL QYIKERALDAKYACAFMFGVNDYHGPQLEEFKYNLTEVVQICQQVKMRQLSVQADMNLLT AYPEYIISFLVHALAHDPSSPDIEEHENVKAFGPTYWRLYLILSILLGEEGLQHSVPGMK KDSFTTIISIFKSIKSSQDVVDGNKNKTLWAICDLGTLIAKRLCQDQTSLSEAQTVPLPP QLYAPLQDNQNENSVESYGQIWPGCEKVLAHFEAVMTANMDKVESPKHKMLIDMTDEFGN EVPLGKIVKLLKLRGEKKAEKKQKAPSSSSVNAENDDDVLGLVREINL

Transcript Sequence

Transcript ID	Zm00001d045783_T087
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:38798847:38813545:-1 gene:Zm00001d045783 gene_biotype:protein_coding transcript_biotype:protein_coding description:binding
Sequence	ATTCCGCTCACGAGCTCTCCGCCTCTCTCTCTCTCTCTCTCTCGCTCTTTTCCGCCACCC CGTCACGCCAAATTTCGAAACAGCGCGAGAGCAGCAAAAGCCGAGGGAGCCCTTCTTTCT CAGATTAGAACCTAACGAGTGCGCTTGGAGGCGGAGGCTGCGAGCTTGCTGCGCGAATTT GGGCGGTCGATCCGGCGCGGCGGCCGGGTATGGCGGCCGCGGAGCAGCTGAAGGAGCTGG GGGAGAAGCTGCAGGCGGTGGCGCCGGCTCCTGCGGACGAACTCGCCAAGCTCCTCGAGA AAGCTGTGGAATGCTTACGTGGAATAGAGCAATCACCGGGGTCCTCAGTGATGGAAGCTA TTCAACCAAGTCTTAAGGCTGTTACCAGAGAAGAATTGCTGAAGCATGAGGATGACAATG TCAAAGTTCTCTTGGCAACATGTTTCTGTGAAATTACAAGAATAACTGCACCTGATGCTC CCTACAACGATGACATTTTAAGGGATATATTCTATCTGATTGTGGGTACATTTGGCGGAC TCAGTGATGTTAATAGTCAATCCTTTGGCAGGAGAGTTGCTATTCTTGAAACAGTTGCTA GATACCGAGCATGTGTTGTGATGTTAGATCTTGAATGTGATGATCTTATTACAAACATGT TTCAAACATTTTTAGGAGTTGTCAGCGACAGTCATGAAGAAAACATTGTAAAGTCAATGC AGGCAATAATGATCCTTATTATAGATGAGAGTGAAGATGTACAGGAGAGTCTTCTACGTG TACTGCTGTCAGCATTGGGGCAGAAAAAAACTGGTGCTGCAATGTCTGCTCGTAAACTTG CTCGCAGTGTCATTGAGCATTCCGCTACAAAGCTTGAACCTTACATAAAGAAGTTTCTAA CGTCATCATGGGCTGGGAATGGCAGTTCTTCTAATGATCAAATTGATCACCAGGGAGTTG TATTTGATTTATATCAGTGTGCTCCGAAGGTTCTTAAGGCGATCGTGCCGTATATTACTG GGGAGCTACTGGCAGATGAAGTAGATAACAGGTCTAAGTCAGTTGAATTACTTGGGGAAA TTTTTTCCTTACCTGGAGCCTCTATTGTGGAATGTTTCAAGACTCTTTTCACAGAATTCC TCAAGAGACTGACTGATAGAGTTGTTGAAATCCGTATTTCTGTGGTTGAGTATTTGAAGA GATGTCTAATATCAAATCCTTCCAGAGCTGAAGCTCCTGAAATCATCAAGGCACTTTGTG ACAGATTGTTGGATTATGAAGAAAATGTGCGGAAGGGAGTGGTGGCTGCACTTTGTGATG TAGCTACCCATTCTCCTTATGCTATTCCAATTGATACAATTAAAGTAGTAGCAGAGCGTG TCCGCGATAAATCGCAGGCTGTGAAGTGCTATACCATGGAGAGGTTGGCAGATATTTACA AGCTGTACTGCCAGAGGGATTCTGATAGCTCAACAAATTCTGATGATTTTGAGTGGATAC CTGGAAAAATATTAAGATGTCTTTATGACAAAGAGTTTAGGCCAGAGTCAATCGACTCTA TTTTGAGTGGTTCATTGTTCTCACCAGAGTACCAAATGAAGGGAAGAGTGAAACATTGGA TTACAGCTGCGACATACTTCGATAAAGTTGAGATGAAAGCCCTTGAACAAATTCTCCTGC ACAAGCAAAGACTGCAACAAGAAATGCTGAAATACATATCGCTTCGGGAACCAAGCCAGG AAGATGCCCCTGATCTGCAAAAAAGAATCTTTGGATGTTTCCGGAACATCTCTCGCTTAT TTAGTGACTCCGCGAAGTGCGAGGAGAACTTGAACATGCTTCATCAGCTAAAAGATGCCG ATTTCTGGAAAATATTCACTAGCCTGCTTAATTGTTCAACTACATTTGAGAAGGCTTGGT CTCTTCGGGCAGAGTTGCTTAAGATACTTGGTGAAAACCATGTGCTTTATAATTTTGTTG GCACATTAACAATGAGATGTTCATATTTACTTGTAAACAAGGAGTATGCAAAAGAGATCC TTGCAGAAGCTTCTGCACAGAAGACTTCTGGGAATACAAAACTCATCTCATCGTGCATGA ATCTTCTAACGGCAATATCTAGTTTCTTTCCATCTCTTTTGGCTGGACTTGAAGAAGACA TTGTTGAACTCCTGAAAGAGGATAATGAAGTGCTTAAAGAGGGTATTGCACATGTGTTAT CAAAGGCTGGTGTCAATATTCGTGAACAGTTAGCCTCAACAAGTTCCCTTGATCTTCTAT TAGAGCGTTTATGCTTAGAGGGTACGCGGAGGCAGGCTAAATACTCTGTTCATGCACTTG CTGCCATTACAAAAGATGATGGTCTTATGTCACTATCTGTTCTTTACAAGAGGCTTGTGG ATTTGTTGGAAGAGAAGAAAGTGAATATACCATCTATCTTGCAATCTTTGGGTTGTATAG CCCAAATAGCGATGCCGATTTTTGAAACACGGAAAGAAGAGATATTAAGTTTCATAATTA AAAAAATTCTTGACTGCAATGATGATATGGTTCAAAATTCTTCTAATAAATCTGAATGGG GTGATAGTACACATAATTGTTTGCTGAAGATTTATGGCATCAAAACTTTGGTGAAGAGCT ATATACCTTGCAAGGATGCTCATGCACAGCCAGGAATAGAGAAGTTAATTGATATTCTGA AGAATATTCTTACCTATGGTGATATATCTCCAAATATGGTCTCAAGTGCTGCTGATAAGG CCCATTTGAGGCTTGCAGCAGCAAAAGCTGTTCTCCGCTTATCAAAACAATGGGACCATA AAGTGCCTGTTGATGTATTTTATTTGACTTTGAGGATTTCACAGGACGATTTTCCTCAGG TGAGGAAATTATTTCTTTGTAAAGTACTTCAATATATCAAGGAAAGGGCCTTGGATGCAA AATATGCTTGCGCCTTCATGTTTGGTGTTAACGATTATCATGGCCCACAGTTAGAAGAGT TCAAGTACAATCTGACTGAAGTGGTTCAGATATGCCAACAAGTTAAGATGCGCCAACTTT CAGTCCAAGCAGATATGAATTTGTTGACGGCTTACCCAGAATATATAATTTCCTTTTTGG TTCATGCCCTTGCTCATGATCCTTCATCCCCGGACATTGAAGAACATGAAAATGTCAAAG CATTTGGTCCAACTTACTGGCGACTTTACCTGATTCTTTCAATCCTCCTGGGGGAAGAAG GTTTGCAACATAGTGTTCCAGGCATGAAAAAGGATAGCTTCACTACAATAATATCTATAT TCAAAAGTATCAAATCTTCACAGGATGTGGTTGATGGAAATAAGAACAAGACTCTGTGGG CTATATGTGATCTTGGTACTCTTATTGCAAAGAGGCTATGCCAAGACCAAACGAGTTTAT CAGAAGCTCAAACCGTTCCATTGCCTCCCCAACTTTATGCACCGCTTCAGGATAACCAAA ATGAAAATTCTGTGGAGAGTTATGGGCAGATTTGGCCGGGATGTGAGAAAGTACTGGCTC ATTTTGAGGCTGTAATGACTGCAAACATGGATAAGGTTGAATCTCCCAAACATAAGATGC TTATTGATATGACTGATGAATTTGGAAATGAAGTTCCTCTTGGGAAAATTGTCAAACTTC TTAAATTGCGAGGAGAAAAGAAGGCGGAGAAAAAGCAGAAGGCACCATCTAGTAGTTCAG TAAATGCCGAGAACGATGATGATGTCCTGGGTTTAGTAAGAGAAATTAACTTGAG