Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045755_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:37242832:37245915:1 gene:Zm00001d045755 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 27 description:PHD-finger family protein

Sequence

ATGGCTGCCCTCGCCGACATCGACTCCTCGGCACTTCCGCCGTCCGAGTCATCCAAAGGC
AAGGGCAAGATGGACGAGGAGGAGGAGGACGAGGCGGAGGGCGCGGAGAAGATGTGCGGC
ATCTGCTATCTCGACGGCCGGCGGGCCATCCGCGGCGAGCTCGACTGCTGCGCCCATTTC
TTTTGCTTTGTCTGCATCATGGCTTGGGGCCGCGTCGAGTCCCGCTGTCCCTTCTGCAGG
GCCCGCTTCCACACCATCCGCCGCCCGCCCGTCGCCGGCCGGTTCCCCGACGAGCGAATC
GTCTCGATCCAAGAGCGCAACCAGGTACACCATCCTCAGGGCAACGGGAGCAGCATAGTG
GGCGGAGATCCTTACGTGAACACCATATGCACCGTTTGCAGCAGCTCCAGCGATGACGAG
CTGCTGCTACTCTGCGAGCTCTGCGACTCAGCTGCACACACTTACTGTGTCGGGCTGGGG
ACCACCGTGCCAGAGGGGGACTGGTTCTGCAAAGACTGCGGGACGATCAGAGATGATCAA
TTGAGATGGCAGGCTGAGAATCAGGGTGAATTTGAGATCAGCATGGATGTTCCTGGAGCT
GAGCCAGTTCCAGCCCCCTCGATTTCTGGTGTTGTGGATGAGGACCATGATCTGGAAAGG
CCATATGCGCGGAGTGGTGGCGGTTCGACGGATGACCCGGTTCCTTCCATTTATGAAATT
GTGGGTGATGATTTTGCTACCAGTGCAGGGATCTTTAGGAGGAGGATTGCTGAGGATATT
GGATCCCAGGGTACTTCAGCTGGATCTCAGTGTCCCAGATCGACCCAGGGACGAGACAAT
GGTCTTGCAGCCTATCATGCTCACATTCGTCTTGAGGTTGAGAGAGCTAGAACATTACGC
AATTCCCGCAATCTTGATAAGCGCATAAGAGAGCTGCGAGAGAACTGGGCTGCTCTGCGT
GCTGGTTCTGTGGGGTTTGCTCCGCATATGCCTGTCAGAAGAAGGAAGGATATGGCTGGT
TCTGCTTCTGTTGCTACTGAGCATCAACGTTATGCAGAGCCTGTAACTCTCAGTTCCCGA
AATGGCGCCGCTGCAGCTTCTGTTCCGCTGCCAATGCCCTTCTCTGAGGAAACTAATACC
TCACTGGGCCATAGTAAAAAAGTCTTGCAAAAGGACACCCGTGATGCCCGTAAGGCATGG
AAAAGGTTGGAGATGGCTAAATCATCTGGTGGGAGGAAGACATCTAAGACACCTGCCTCC
ATTAACTGCTGTCCCCCATTTTCCATGGGTAACAGATCGACTTCTTACAGTCCAATTGAT
ACAATTGTGGGACACAAGAACGGGAATCTGCGTAGTAAGTCTTGTCAACAAAATTATTCA
ATCTGTGGTCATGTTACAAAAGTGGAACATACGCTGCCCACGAATAACTCCAGAGGATGC
CATAGCTTGCCTGAGAACAGTCGTGCCTTGGATCATGAGAGGATGGTTTCTTCCCAGAAT
CGAATAAATCAGGAAAGCTTTAGTGGCAAAGTTGCATCATCGACCCACATTCAACATGTT
GACCAAGCATTAGTATCTACCTTTAATACACACAGACCAGAAAAACTCGTATCAGACATG
CTGCATCCACTAAAGTATGGTTCATCATCTGGCCAGTCAGCTGTGACTTCATCCCTACAA
TTAGGATCTAGTGTTGGATCTGGGAGCCAATCCACTATGCCGGTAAACCCTGAGGAACCT
TCAGCTGTTTGTGCTGAAGATATTGCAGCAACCATTGAAGTTACGAAAAGTTCTAGTCTG
GACCAGCATGAGCGCAAGAGAAAACACAGTTCGGAAAGATGCAGTGATCAAAGATCCAAA
AGATCCAGGTCAACCTGTAAAATTGCAAAAAGTGAGATTTCTTCTTTGGCCATTCGTGAG
TTGAAGCTACTCAAGATAGACAAAACACATGGTTCTGACAGATTCAAGGAAGTTGCTCGG
ACAGCAACACATTCCATCTTGGCTGCCTGCAGATTTGAGCATTCGCCATCGCAATCCCTT
GCACTCTCAAGACCTGTCTGCAAGCACAGCCCCAAAGTCAAACAGCTGAACTCGTCAGCA
ATTACTGATTTTTGCAGAGAATGCTTGCATAACTTTGTTAAAGAAGCTGTCAGTTTGGCA
TTGTCTGGCGGGCAGATGGATCAAACTGGTACCCCCTGTTAG

Peptide Sequence

PEP ID

Zm00001d045755_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:37242832:37245915:1 gene:Zm00001d045755 transcript:Zm00001d045755_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 27 description:PHD-finger family protein

Sequence

MAALADIDSSALPPSESSKGKGKMDEEEEDEAEGAEKMCGICYLDGRRAIRGELDCCAHF
FCFVCIMAWGRVESRCPFCRARFHTIRRPPVAGRFPDERIVSIQERNQVHHPQGNGSSIV
GGDPYVNTICTVCSSSSDDELLLLCELCDSAAHTYCVGLGTTVPEGDWFCKDCGTIRDDQ
LRWQAENQGEFEISMDVPGAEPVPAPSISGVVDEDHDLERPYARSGGGSTDDPVPSIYEI
VGDDFATSAGIFRRRIAEDIGSQGTSAGSQCPRSTQGRDNGLAAYHAHIRLEVERARTLR
NSRNLDKRIRELRENWAALRAGSVGFAPHMPVRRRKDMAGSASVATEHQRYAEPVTLSSR
NGAAAASVPLPMPFSEETNTSLGHSKKVLQKDTRDARKAWKRLEMAKSSGGRKTSKTPAS
INCCPPFSMGNRSTSYSPIDTIVGHKNGNLRSKSCQQNYSICGHVTKVEHTLPTNNSRGC
HSLPENSRALDHERMVSSQNRINQESFSGKVASSTHIQHVDQALVSTFNTHRPEKLVSDM
LHPLKYGSSSGQSAVTSSLQLGSSVGSGSQSTMPVNPEEPSAVCAEDIAATIEVTKSSSL
DQHERKRKHSSERCSDQRSKRSRSTCKIAKSEISSLAIRELKLLKIDKTHGSDRFKEVAR
TATHSILAACRFEHSPSQSLALSRPVCKHSPKVKQLNSSAITDFCRECLHNFVKEAVSLA
LSGGQMDQTGTPC

Transcript Sequence

Transcript ID

Zm00001d045755_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:37242832:37245915:1 gene:Zm00001d045755 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 27 description:PHD-finger family protein

Sequence

ATGACCGACTAGCCCATGGTCTCTCTCCGCTCCGACGCGCCCGACCCACCACCACATCCC
TCATGGCTGCCCTCGCCGACATCGACTCCTCGGCACTTCCGCCGTCCGAGTCATCCAAAG
GCAAGGGCAAGATGGACGAGGAGGAGGAGGACGAGGCGGAGGGCGCGGAGAAGATGTGCG
GCATCTGCTATCTCGACGGCCGGCGGGCCATCCGCGGCGAGCTCGACTGCTGCGCCCATT
TCTTTTGCTTTGTCTGCATCATGGCTTGGGGCCGCGTCGAGTCCCGCTGTCCCTTCTGCA
GGGCCCGCTTCCACACCATCCGCCGCCCGCCCGTCGCCGGCCGGTTCCCCGACGAGCGAA
TCGTCTCGATCCAAGAGCGCAACCAGGTACACCATCCTCAGGGCAACGGGAGCAGCATAG
TGGGCGGAGATCCTTACGTGAACACCATATGCACCGTTTGCAGCAGCTCCAGCGATGACG
AGCTGCTGCTACTCTGCGAGCTCTGCGACTCAGCTGCACACACTTACTGTGTCGGGCTGG
GGACCACCGTGCCAGAGGGGGACTGGTTCTGCAAAGACTGCGGGACGATCAGAGATGATC
AATTGAGATGGCAGGCTGAGAATCAGGGTGAATTTGAGATCAGCATGGATGTTCCTGGAG
CTGAGCCAGTTCCAGCCCCCTCGATTTCTGGTGTTGTGGATGAGGACCATGATCTGGAAA
GGCCATATGCGCGGAGTGGTGGCGGTTCGACGGATGACCCGGTTCCTTCCATTTATGAAA
TTGTGGGTGATGATTTTGCTACCAGTGCAGGGATCTTTAGGAGGAGGATTGCTGAGGATA
TTGGATCCCAGGGTACTTCAGCTGGATCTCAGTGTCCCAGATCGACCCAGGGACGAGACA
ATGGTCTTGCAGCCTATCATGCTCACATTCGTCTTGAGGTTGAGAGAGCTAGAACATTAC
GCAATTCCCGCAATCTTGATAAGCGCATAAGAGAGCTGCGAGAGAACTGGGCTGCTCTGC
GTGCTGGTTCTGTGGGGTTTGCTCCGCATATGCCTGTCAGAAGAAGGAAGGATATGGCTG
GTTCTGCTTCTGTTGCTACTGAGCATCAACGTTATGCAGAGCCTGTAACTCTCAGTTCCC
GAAATGGCGCCGCTGCAGCTTCTGTTCCGCTGCCAATGCCCTTCTCTGAGGAAACTAATA
CCTCACTGGGCCATAGTAAAAAAGTCTTGCAAAAGGACACCCGTGATGCCCGTAAGGCAT
GGAAAAGGTTGGAGATGGCTAAATCATCTGGTGGGAGGAAGACATCTAAGACACCTGCCT
CCATTAACTGCTGTCCCCCATTTTCCATGGGTAACAGATCGACTTCTTACAGTCCAATTG
ATACAATTGTGGGACACAAGAACGGGAATCTGCGTAGTAAGTCTTGTCAACAAAATTATT
CAATCTGTGGTCATGTTACAAAAGTGGAACATACGCTGCCCACGAATAACTCCAGAGGAT
GCCATAGCTTGCCTGAGAACAGTCGTGCCTTGGATCATGAGAGGATGGTTTCTTCCCAGA
ATCGAATAAATCAGGAAAGCTTTAGTGGCAAAGTTGCATCATCGACCCACATTCAACATG
TTGACCAAGCATTAGTATCTACCTTTAATACACACAGACCAGAAAAACTCGTATCAGACA
TGCTGCATCCACTAAAGTATGGTTCATCATCTGGCCAGTCAGCTGTGACTTCATCCCTAC
AATTAGGATCTAGTGTTGGATCTGGGAGCCAATCCACTATGCCGGTAAACCCTGAGGAAC
CTTCAGCTGTTTGTGCTGAAGATATTGCAGCAACCATTGAAGTTACGAAAAGTTCTAGTC
TGGACCAGCATGAGCGCAAGAGAAAACACAGTTCGGAAAGATGCAGTGATCAAAGATCCA
AAAGATCCAGGTCAACCTGTAAAATTGCAAAAAGTGAGATTTCTTCTTTGGCCATTCGTG
AGTTGAAGCTACTCAAGATAGACAAAACACATGGTTCTGACAGATTCAAGGAAGTTGCTC
GGACAGCAACACATTCCATCTTGGCTGCCTGCAGATTTGAGCATTCGCCATCGCAATCCC
TTGCACTCTCAAGACCTGTCTGCAAGCACAGCCCCAAAGTCAAACAGCTGAACTCGTCAG
CAATTACTGATTTTTGCAGAGAATGCTTGCATAACTTTGTTAAAGAAGCTGTCAGTTTGG
CATTGTCTGGCGGGCAGATGGATCAAACTGGTACCCCCTGTTAGATTGTAGACAAATTTG
GGATTCTTTCTTGTCTTATCATTGTGAATATCTCAAAGCACAAACTAGGGACAAGTTGTA
CAATTTATGGCATGTTAATGCCTGTCCTGTAGTGTAGTTGCCAGGTCTAATCAGTACTGT
AACAACTAACAAAATATTCTCTTTAATATGCCACGACCATGGCTGAAGTATTGGAGCCTA
ACATTGGCCGGCTACTGAGGTGTGGTTGGTGTACCTGGAGCACCTAATCCGTCTCACATC
ATCGTACGGTTGGGTTGTAAATGTTGGCTATTAGTTGGTGGATTCAAGTCTCCCGAAGGA
GAGCTCGATGAAACTTGCATAATTGCTGATCTCAACTGTTCTGAACTATTGGTGCTGTAT
TTTGATAGTTTAACTGAAGCCTTTCACTGATAAGGAAAGCAGACAGCTATTATGGAGATA
TATTGTAGCCTCTCCGAATCCAAGCATTCCCTAAAATGTTT