Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045744_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:36378780:36410375:1 gene:Zm00001d045744 gene_biotype:protein_coding transcript_biotype:protein_coding description:SMAD/FHA domain-containing protein
Sequence	ATGAACCCTTCCATGCCACCGCCTCCGCCGCGTAACCCTAATTCCTTTTCGTCATCCGCC TCCATGCCACCTTCTCCGCTCCCAAACCCCTCGCCGCCGACGGCACGGCCGGAGGCGGCG TCCGAGCCCGACTTGTCTTCAGCGGAGGTGAACGGTCGCGCTAACCCTAGCACATCCTCC TCGATGCCTCCGCCTCCGCCTCAAAAACCCGCCCCACCGGCACCGCAGATGGAAGCGAAG GCGGCAGAGGCTGAGGGAGGCGCTGTCCCGAGCCCGAGCGTGAGCGGTTCGTCAGCGAAG GAGGCGCCCAACAGCAGCGGGGCCTCCTCCGGCAACAACGTGATGGAGGAAGCGGCCGCG TCGCCGGTGGAGCGGCAGAGGGCTCGCGCGCCGTACGCCATTCCCGAGTGGAGCACCGCG CCGAGCCAACCCTTCTTCCTTGAGGTGCTCAAGGACGGGACGATCGTTGATCAGCTTGAC GTGTCCAAGAAAGGAGCTTACATGTTTGGTCGAATTGATCTGTGCGATTTTGTATTGGAG CATCCAACCATTTCTCGATTCCATGCTGTTTTGCAGTTCAGAAATGATGGGAAGGTTTTC CTTTTTGATCTTGGAAGCACACATGGATCCTTTATCAATAAAAATCTGATCAAGAAGAAG CTGTACACAGAGATTCATGTTGGAGATGTAATTCGATTTGGGCAATCATCACGGCTGTAC ATTTTTCAAGGACCATCTGAGCTAATGCCTCCAGAAAAAGACTTGCAGAAGCTTCGGGAT GCTAGAATTCAGCAAGACATGCTTGATCGTGAAGCTTCCATTTTACGTGCAAAAACTCAA GCAGCTTTGGCAGAGGGAATCTCATGGGGTATGACAGATGATGCAATAGAAGAGTCTGCA GAGGATGATGCAGATGAAATTACTTGGCAAACCTACAAAGGTCAGCTTACTGATAGACAA GAGAAAACTCGTAGCAAGATAGTAAAACGAATGGAGAAGATTGCCAACATGAAAAAAGAA ATTGATGCAATAAGAGTTAAGGACATTTCTCAAGGTGGGCTAACCCAAGGTCAACAAACA CAAATTGCACGAAATGAACAACGGATGTCTCAGATTATGGAGGAGCTAGATAATCTAGAA GAAACTTTAAATGACAGTATACGGGAAAGTATTGGTGCTCGTTCTGGAAAGGCAAAGCGT GGCAGCTATAAAGCAAGTCTCGAGGAAGAAGATGACGTTCTTAGTGACGATGATGAATTT TATGATCGAACGAAGAAGAAATCTACTCAGAAATCAAGTGAGCAACAATCGGTTGAGACT GCTGACAGCCTTCTTGAGAAAAAAGATTTCATCACCAATGATATTGAAAGTAAAACAAAA TTGCTGGAAGAAGAGAAGCATAAGCTGTCTCAGAGTGATACACCAGATCTCAGGGATGAC CTTGATGCTTATATGAGTGGCTTGTCATCTCAATTAGTACATGATAAGATTGCCCGAATT CAGAAGGAGCTCTCTGATCTTCAGGATGAGCTGGACAGAGTAGTGTACCTACTGAAAATA GCTGACCCTACGGGAGAAGCAGCTCGTAAGAGGGATCTAAAGCCAAGAGAAGCGAAACCT CCAACATCTAATGATAATCCAAGACTAGAATCAAAGAAACAAAATAAAATTGGAAAAGCT ACAGCTGAGGAGAAACCCAAGGATTCTTCTAGCGAAGTGGGCACAGATAAACCTGCTAAA TTACAGACAGATATCTCCAAGAACCAAGAAGATGGCAGCAAACCTGCATTCGCCATGCCA AAACCTCAATGGCTTGGTGACAAAAGGATCATAAAACCTGAAGAAAACCTTATAAATGAA GAAAAGTCTGATGCAGAGGAACCTGATAATTTTGTGGACTACAAAGACCGGAAAATTATT CTTTCTTCAGGCAGTGAAAAGAAGCTTGAAGAGGCTGCCCCTGGGCTTATTTTACGGAAG AGAAAGTCTGCTGACGAGTCAGTTGCTAGCGAGGCAAATTCATCTTCGGTTGAAAGTGAA GCATCAGTTGCTGATGCTGTGGCCCTTCTGCTTAAGCATAAACGTGGTCTACAAACCTCA GAAGAAATGGAGAATGAGACTGAACCATATTCTAGCAAGACCGAAGGGAAGAAGTCGAAA CAAAAACGTGTATTGGGCCCAGCAAGACCAGATTTCCTTGAAGCCAGACAAGACTCTGAA ACATGGGTGCCACCTGAAGGTCAAACTGGTGATGGGCGCACTGCATTGAATGACCGTTTG GGTTATTGA

Peptide Sequence

PEP ID	Zm00001d045744_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:36378780:36410375:1 gene:Zm00001d045744 transcript:Zm00001d045744_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:SMAD/FHA domain-containing protein
Sequence	MNPSMPPPPPRNPNSFSSSASMPPSPLPNPSPPTARPEAASEPDLSSAEVNGRANPSTSS SMPPPPPQKPAPPAPQMEAKAAEAEGGAVPSPSVSGSSAKEAPNSSGASSGNNVMEEAAA SPVERQRARAPYAIPEWSTAPSQPFFLEVLKDGTIVDQLDVSKKGAYMFGRIDLCDFVLE HPTISRFHAVLQFRNDGKVFLFDLGSTHGSFINKNLIKKKLYTEIHVGDVIRFGQSSRLY IFQGPSELMPPEKDLQKLRDARIQQDMLDREASILRAKTQAALAEGISWGMTDDAIEESA EDDADEITWQTYKGQLTDRQEKTRSKIVKRMEKIANMKKEIDAIRVKDISQGGLTQGQQT QIARNEQRMSQIMEELDNLEETLNDSIRESIGARSGKAKRGSYKASLEEEDDVLSDDDEF YDRTKKKSTQKSSEQQSVETADSLLEKKDFITNDIESKTKLLEEEKHKLSQSDTPDLRDD LDAYMSGLSSQLVHDKIARIQKELSDLQDELDRVVYLLKIADPTGEAARKRDLKPREAKP PTSNDNPRLESKKQNKIGKATAEEKPKDSSSEVGTDKPAKLQTDISKNQEDGSKPAFAMP KPQWLGDKRIIKPEENLINEEKSDAEEPDNFVDYKDRKIILSSGSEKKLEEAAPGLILRK RKSADESVASEANSSSVESEASVADAVALLLKHKRGLQTSEEMENETEPYSSKTEGKKSK QKRVLGPARPDFLEARQDSETWVPPEGQTGDGRTALNDRLGY

Transcript Sequence

Transcript ID	Zm00001d045744_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:36378780:36410375:1 gene:Zm00001d045744 gene_biotype:protein_coding transcript_biotype:protein_coding description:SMAD/FHA domain-containing protein
Sequence	GAAACACTGAAAACCAAGGGCGAAGATTGCTTTGTTCGACTTTGATCTCGCTCTCGCTCG CAACTCACCTCTCCCTCTCCACTCGCACCTCGCCGCCGTCTACCCGTCTGCTGTCCTAGC CCCGCTTCTGCCGCAGCCATGAACCCTTCCATGCCACCGCCTCCGCCGCGTAACCCTAAT TCCTTTTCGTCATCCGCCTCCATGCCACCTTCTCCGCTCCCAAACCCCTCGCCGCCGACG GCACGGCCGGAGGCGGCGTCCGAGCCCGACTTGTCTTCAGCGGAGGTGAACGGTCGCGCT AACCCTAGCACATCCTCCTCGATGCCTCCGCCTCCGCCTCAAAAACCCGCCCCACCGGCA CCGCAGATGGAAGCGAAGGCGGCAGAGGCTGAGGGAGGCGCTGTCCCGAGCCCGAGCGTG AGCGGTTCGTCAGCGAAGGAGGCGCCCAACAGCAGCGGGGCCTCCTCCGGCAACAACGTG ATGGAGGAAGCGGCCGCGTCGCCGGTGGAGCGGCAGAGGGCTCGCGCGCCGTACGCCATT CCCGAGTGGAGCACCGCGCCGAGCCAACCCTTCTTCCTTGAGGTGCTCAAGGACGGGACG ATCGTTGATCAGCTTGACGTGTCCAAGAAAGGAGCTTACATGTTTGGTCGAATTGATCTG TGCGATTTTGTATTGGAGCATCCAACCATTTCTCGATTCCATGCTGTTTTGCAGTTCAGA AATGATGGGAAGGTTTTCCTTTTTGATCTTGGAAGCACACATGGATCCTTTATCAATAAA AATCTGATCAAGAAGAAGCTGTACACAGAGATTCATGTTGGAGATGTAATTCGATTTGGG CAATCATCACGGCTGTACATTTTTCAAGGACCATCTGAGCTAATGCCTCCAGAAAAAGAC TTGCAGAAGCTTCGGGATGCTAGAATTCAGCAAGACATGCTTGATCGTGAAGCTTCCATT TTACGTGCAAAAACTCAAGCAGCTTTGGCAGAGGGAATCTCATGGGGTATGACAGATGAT GCAATAGAAGAGTCTGCAGAGGATGATGCAGATGAAATTACTTGGCAAACCTACAAAGGT CAGCTTACTGATAGACAAGAGAAAACTCGTAGCAAGATAGTAAAACGAATGGAGAAGATT GCCAACATGAAAAAAGAAATTGATGCAATAAGAGTTAAGGACATTTCTCAAGGTGGGCTA ACCCAAGGTCAACAAACACAAATTGCACGAAATGAACAACGGATGTCTCAGATTATGGAG GAGCTAGATAATCTAGAAGAAACTTTAAATGACAGTATACGGGAAAGTATTGGTGCTCGT TCTGGAAAGGCAAAGCGTGGCAGCTATAAAGCAAGTCTCGAGGAAGAAGATGACGTTCTT AGTGACGATGATGAATTTTATGATCGAACGAAGAAGAAATCTACTCAGAAATCAAGTGAG CAACAATCGGTTGAGACTGCTGACAGCCTTCTTGAGAAAAAAGATTTCATCACCAATGAT ATTGAAAGTAAAACAAAATTGCTGGAAGAAGAGAAGCATAAGCTGTCTCAGAGTGATACA CCAGATCTCAGGGATGACCTTGATGCTTATATGAGTGGCTTGTCATCTCAATTAGTACAT GATAAGATTGCCCGAATTCAGAAGGAGCTCTCTGATCTTCAGGATGAGCTGGACAGAGTA GTGTACCTACTGAAAATAGCTGACCCTACGGGAGAAGCAGCTCGTAAGAGGGATCTAAAG CCAAGAGAAGCGAAACCTCCAACATCTAATGATAATCCAAGACTAGAATCAAAGAAACAA AATAAAATTGGAAAAGCTACAGCTGAGGAGAAACCCAAGGATTCTTCTAGCGAAGTGGGC ACAGATAAACCTGCTAAATTACAGACAGATATCTCCAAGAACCAAGAAGATGGCAGCAAA CCTGCATTCGCCATGCCAAAACCTCAATGGCTTGGTGACAAAAGGATCATAAAACCTGAA GAAAACCTTATAAATGAAGAAAAGTCTGATGCAGAGGAACCTGATAATTTTGTGGACTAC AAAGACCGGAAAATTATTCTTTCTTCAGGCAGTGAAAAGAAGCTTGAAGAGGCTGCCCCT GGGCTTATTTTACGGAAGAGAAAGTCTGCTGACGAGTCAGTTGCTAGCGAGGCAAATTCA TCTTCGGTTGAAAGTGAAGCATCAGTTGCTGATGCTGTGGCCCTTCTGCTTAAGCATAAA CGTGGTCTACAAACCTCAGAAGAAATGGAGAATGAGACTGAACCATATTCTAGCAAGACC GAAGGGAAGAAGTCGAAACAAAAACGTGTATTGGGCCCAGCAAGACCAGATTTCCTTGAA GCCAGACAAGACTCTGAAACATGGGTGCCACCTGAAGGTCAAACTGGTGATGGGCGCACT GCATTGAATGACCGTTTGGGTTATTGAAAAGCTCTTCCAGCAACAGTTCCCTTGTGGAGA AGTGCAGTATCGTGCCTATGGTTTTGAGCCTGTTTGGGGCTCCATATTCTGTGAAGACAA CGCAATAGAAGTTAAGAATGCTTATTCTGTTGATGGCAAGTTTGGTGAAGGAACTATTCA TTGACTTTTTAGGGCGCTAGTGGGACTGTAGCTCGGCTAATCCTCTCACACTCTAAGGGT TTGTTCGGTTATTTTCAATCTATATGGATTGGAGGGGATTGATATAAATTGGGAGAGATT TTGAGTACTAGGAATTGAAACCCCATCAATTCCTCTCAATCCATTTCGATTGTGGTAGAA CCGAACATGACCTAAAGAGGATATTTAGGCTATAAAGAGGTTCAATGTGTTAAGGC