Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045739_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:9:36163970:36169024:-1 gene:Zm00001d045739 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-protein ligase
Sequence	ATGCAGGAAATCATAGCGAAAACCAGAGCCGTCTCAAGGACAATAAAGCTGCTATCCAGC AGTAGTACTGATGAGAGGCATGCATCTATATCTTTCTTGCTAGAGCTTTCGAAGTCAGAG TTGCTGTTGGAGAACATTGGATCAACTGCTGGGAGCATACTGATCCTCACCACGATGAAG TTTAATAGCTCATCTGATCCTATTGCTGCCGAGAAGGCTGGAGAAGTCCTCGAGAACCTG GAGAAATGCCCCAAGAATATCAAGTACATGGCTGAAAGTGGCTACTTGGATCCTCTGCAA AGGCACCTAGTTGAAGGACCAGAAGATGTGCAGATGGAGATGGTGAGCTACCTCGGCGAG CTGGTCCAGAAGCAGGAGATGACCATCAATATAGCAGGGAGTGCATCAGAGATCCTCATC AAAATGGTGTGCAGTGGTAATACGGCAATTCGAAAGGCGACCCTCGATGTCCTGGTTCAG ATCTCGTCCCACCACCCCAACGCCAAGACGCTTGTGGATGCTGGTGCCGTCCCTGTCATG GTAGAGGAGCTCTTCATACGAAAGATTGATGATGAGCCCATGGGCTCTAAGACAGAGGCT GCCGCGGTGCTCGCCAACATCGTCGAGTCTGGCTTGGATCCAGAGGCCATCACCGTGAAC AAGGAAGGCCACGTCATCACGTCCAAGTACTCGGTATACAACTTCGCTCACATGCTCAAG TGCTCCATGCCTGACACCCTCAACCTAAGCATTGTGCGCGTGCTGCTCGCGCTGACCGCT CTCCCCAAGCCTCTCGCCACGGTGGTCTCGGTCATGAAGGAGCAAGACAGTGGACAGACG GTGATTGAGCTGATGGGCTCGCTGACAGAGTCGCTTGTCATCGCCGCAATGAGGCTGCTT ATTGCGTTGTCCCCGCAGATGGGGCACACCATTGCCGAGAAGCTGTGCAAGGCCCCGGGG CAGCCAGGGAGGCTTGTCAAGAGCATTGGCCTGCACGGGCGGATCATGGAGCGGCACGCC ATGTCAGCTACTCTCCTGGCGAAGCTGCCGTACCAGCACATCGCTCTGAACCTGGCGCTG ATCAACCAGGGCGCGATGGTTACCGTGCTAGCCAAGATAGAGGAGATGCAGCGCGGCGAG ACGCGGGCAAGCCGCCATGCGAAGGCGTATATGGAGGGCCTCATGGGTGTGCTGGTCCGG CTAACGACGACGCTGTATGACCCGGACGTGCTCTTGGCGGCCATGGATCACAACCTCACG TCGGTGCTCACAGATCTCGTGCGGTCCGCAGGCAGCGACGAGGTCCAGCGGCTCGCCGCG ATTGGTCTCGAGAACCTCAGCAGCCAGTCGCCCAACCTTTCCCAGCCCCCGACCGAGGAG CGGCGCCCGAAGAAGAAGAACATCCTCCGGCGCCTGCGCGAGGCGCACGCGGGGCGGGTG CACGACAACCGGAGGCCGCCGGCGCACAGCCGGGTTTGCCCGGTGCACCGTGGGGTGTGT TCCCCGTCCACCACGTTCTGCCTGGTGGAGGCTGGCGCGGTGGAGGGCCTCTTGTGCGTC CTGGAGAGCAGCGAGAACGGGCGCGTGGTGGAGGCCGCGCTCGGTGCGCTGTGCACGCTC ATGGACGACGCGGTGGACGTGACGAGCGGCGTGGCCGTGCTCGCGGAGCACGACGCGGCG CGGCACGTGCTTCGCGCGCTGCGGCAGCACCGTGACGACGGGCGGAGAGGGGGCGGCGGC GCTGCCGCAGGCGAGACGGTCACTCGGAGGTGTTTCTGGGCGGTGGAGAGGTTCCTGGCT CACGGCAGCGAGCGGTGCGTGAGGGAGGTCACCAGCGATCGGGCGCTGCCGAGCCTGCTG GTGGGCGCCTTCCACAAGGGCGACGCCGCCACCAAGCAGGTGGCCGAGAGCGTGCTCCGG TGCCTGCACCGCATGCCGGATTACTCCGCGACCTACGAATCCGTCGAACTGTAA

Peptide Sequence

PEP ID	Zm00001d045739_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:9:36163970:36169024:-1 gene:Zm00001d045739 transcript:Zm00001d045739_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-protein ligase
Sequence	MQEIIAKTRAVSRTIKLLSSSSTDERHASISFLLELSKSELLLENIGSTAGSILILTTMK FNSSSDPIAAEKAGEVLENLEKCPKNIKYMAESGYLDPLQRHLVEGPEDVQMEMVSYLGE LVQKQEMTINIAGSASEILIKMVCSGNTAIRKATLDVLVQISSHHPNAKTLVDAGAVPVM VEELFIRKIDDEPMGSKTEAAAVLANIVESGLDPEAITVNKEGHVITSKYSVYNFAHMLK CSMPDTLNLSIVRVLLALTALPKPLATVVSVMKEQDSGQTVIELMGSLTESLVIAAMRLL IALSPQMGHTIAEKLCKAPGQPGRLVKSIGLHGRIMERHAMSATLLAKLPYQHIALNLAL INQGAMVTVLAKIEEMQRGETRASRHAKAYMEGLMGVLVRLTTTLYDPDVLLAAMDHNLT SVLTDLVRSAGSDEVQRLAAIGLENLSSQSPNLSQPPTEERRPKKKNILRRLREAHAGRV HDNRRPPAHSRVCPVHRGVCSPSTTFCLVEAGAVEGLLCVLESSENGRVVEAALGALCTL MDDAVDVTSGVAVLAEHDAARHVLRALRQHRDDGRRGGGGAAAGETVTRRCFWAVERFLA HGSERCVREVTSDRALPSLLVGAFHKGDAATKQVAESVLRCLHRMPDYSATYESVEL

Transcript Sequence

Transcript ID	Zm00001d045739_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:36163970:36169024:-1 gene:Zm00001d045739 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-protein ligase
Sequence	TCCGACTCCGACTCCGACTCCGAGGGCGGTGCGAGTGACCTTGCCCTTGTTTGGATTGGA CGACGACTGGGTCCGCGAGCTGCCAGCGCGGTCTCCCACCACTATCCCTCTCTCCCCTCT CCGTTTGTCTCCATCCTTTCTACCTCGGCTGCTGCGTTGCGTGTGGCGCTGTGCTTGGGC AGACGTGGGCACCATGCCTGGGTGACTTGGTGTAGCACTGTAGCTGTGGCATGGAGCTGA GGAAGACGACGACGGGGGAGAGAAGAATGCTCCCCGGGTGCTAACTTGGCCGCCGCTGCT CAGGGGACGAGTCGAGGGGGAGAAGAGGAAAGTCCAGTTTCTTCAGCTTCTTGGTTGGAT GCAGGAAATCATAGCGAAAACCAGAGCCGTCTCAAGGACAATAAAGCTGCTATCCAGCAG TAGTACTGATGAGAGGCATGCATCTATATCTTTCTTGCTAGAGCTTTCGAAGTCAGAGTT GCTGTTGGAGAACATTGGATCAACTGCTGGGAGCATACTGATCCTCACCACGATGAAGTT TAATAGCTCATCTGATCCTATTGCTGCCGAGAAGGCTGGAGAAGTCCTCGAGAACCTGGA GAAATGCCCCAAGAATATCAAGTACATGGCTGAAAGTGGCTACTTGGATCCTCTGCAAAG GCACCTAGTTGAAGGACCAGAAGATGTGCAGATGGAGATGGTGAGCTACCTCGGCGAGCT GGTCCAGAAGCAGGAGATGACCATCAATATAGCAGGGAGTGCATCAGAGATCCTCATCAA AATGGTGTGCAGTGGTAATACGGCAATTCGAAAGGCGACCCTCGATGTCCTGGTTCAGAT CTCGTCCCACCACCCCAACGCCAAGACGCTTGTGGATGCTGGTGCCGTCCCTGTCATGGT AGAGGAGCTCTTCATACGAAAGATTGATGATGAGCCCATGGGCTCTAAGACAGAGGCTGC CGCGGTGCTCGCCAACATCGTCGAGTCTGGCTTGGATCCAGAGGCCATCACCGTGAACAA GGAAGGCCACGTCATCACGTCCAAGTACTCGGTATACAACTTCGCTCACATGCTCAAGTG CTCCATGCCTGACACCCTCAACCTAAGCATTGTGCGCGTGCTGCTCGCGCTGACCGCTCT CCCCAAGCCTCTCGCCACGGTGGTCTCGGTCATGAAGGAGCAAGACAGTGGACAGACGGT GATTGAGCTGATGGGCTCGCTGACAGAGTCGCTTGTCATCGCCGCAATGAGGCTGCTTAT TGCGTTGTCCCCGCAGATGGGGCACACCATTGCCGAGAAGCTGTGCAAGGCCCCGGGGCA GCCAGGGAGGCTTGTCAAGAGCATTGGCCTGCACGGGCGGATCATGGAGCGGCACGCCAT GTCAGCTACTCTCCTGGCGAAGCTGCCGTACCAGCACATCGCTCTGAACCTGGCGCTGAT CAACCAGGGCGCGATGGTTACCGTGCTAGCCAAGATAGAGGAGATGCAGCGCGGCGAGAC GCGGGCAAGCCGCCATGCGAAGGCGTATATGGAGGGCCTCATGGGTGTGCTGGTCCGGCT AACGACGACGCTGTATGACCCGGACGTGCTCTTGGCGGCCATGGATCACAACCTCACGTC GGTGCTCACAGATCTCGTGCGGTCCGCAGGCAGCGACGAGGTCCAGCGGCTCGCCGCGAT TGGTCTCGAGAACCTCAGCAGCCAGTCGCCCAACCTTTCCCAGCCCCCGACCGAGGAGCG GCGCCCGAAGAAGAAGAACATCCTCCGGCGCCTGCGCGAGGCGCACGCGGGGCGGGTGCA CGACAACCGGAGGCCGCCGGCGCACAGCCGGGTTTGCCCGGTGCACCGTGGGGTGTGTTC CCCGTCCACCACGTTCTGCCTGGTGGAGGCTGGCGCGGTGGAGGGCCTCTTGTGCGTCCT GGAGAGCAGCGAGAACGGGCGCGTGGTGGAGGCCGCGCTCGGTGCGCTGTGCACGCTCAT GGACGACGCGGTGGACGTGACGAGCGGCGTGGCCGTGCTCGCGGAGCACGACGCGGCGCG GCACGTGCTTCGCGCGCTGCGGCAGCACCGTGACGACGGGCGGAGAGGGGGCGGCGGCGC TGCCGCAGGCGAGACGGTCACTCGGAGGTGTTTCTGGGCGGTGGAGAGGTTCCTGGCTCA CGGCAGCGAGCGGTGCGTGAGGGAGGTCACCAGCGATCGGGCGCTGCCGAGCCTGCTGGT GGGCGCCTTCCACAAGGGCGACGCCGCCACCAAGCAGGTGGCCGAGAGCGTGCTCCGGTG CCTGCACCGCATGCCGGATTACTCCGCGACCTACGAATCCGTCGAACTGTAACCAACACA TGACGCGCACGACTGCGCATGTCTTGCCTCTCTTTTATCAAGCTTCGTCTCTTGGTTATG TTTGTAAAATTGGTTTTTGTGTGTAACATGGGTTGATGTATTGTTTGGTGTAGCTAAAGG AAAATAGAAAAGGAAAAACTGAAGAT