Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045711_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:34739030:34740154:1 gene:Zm00001d045711 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ATGGCCACCCTCAAGGCATCGATCTTGGCCATCCTTGGTTTCGCCTTCTTCTGCGGTGCT GCCTTGGCTGCCCGCGACCTGAGCGACGACTCTGCCATGGTGGCGAGGCATGAGCAGTGG ATGGCGCAGTACAGCCGCGTCTACAAAGACGCCTCCGAGAAGGCTCGGCGGTTCGAGGTG TTCAAGGCTAACGTTAAGTTCATCGAGTCGTTCAACGCTGGTGGGAATAATAAGTTCTGG CTCGGTGTCAACCAGTTCGCCGATCTCACCAACGACGAGTTCAGGTCTATCAAAACTAAT AAGGGCTTCAAATCTAGCAACATGAAGATCCCTACAGGATTTAGGTATGAGAATGTTAGC GTCGATGCGCTTCCGACGACCATCGATTGGAGGACCAAGGGCGCCGTCACTCCCATCAAG GATCAAGGTCAATGTGGTTGCTGCTGGGCGTTCTCAGCCGTGGCTGCCACCGAAGGCATC GTGAAAATCAGCACCGGTAAGCTCGTCTCTCTTGCAGAACAAGAGTTAGTGGATTGCGAT GTCCATGGCGAGGATCAAGGTTGTGAGGGTGGTTTGATGGACGATGCTTTCAAGTTCATC ATCAATAACGGTGGCCTAACCACGGAGTCCAGCTATCCTTACACTGCTGCAGATGGCAAG TGTAAGAGTGGATCAAATAGTGCCGCAACCATAAAGGGCTACGAGGATGTGCCAGCAAAT GATGAGGCTGCCTTGATGAAGGCCGTGGCAAACCAGCCTGTGTCGGTGGCAGTGGATGGT GGAGACATGACGTTCCAATTCTACTCTAGTGGTGTGATGACTGGCTCATGCGGTACTGAC TTAGATCATGGGATTGCAGCCATTGGTTATGGAAAGACCAGTGATGGTACTAAGTACTGG CTGATGAAGAATTCATGGGGCACGACTTGGGGCGAGAATGGATATCTCAGAATGGAGAAG GATATTTCGGACAAGAGGGGCATGTGTGGCCTAGCCATGGAGCCTTCCTACCCCACCGAG TAG

Peptide Sequence

PEP ID	Zm00001d045711_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:34739030:34740154:1 gene:Zm00001d045711 transcript:Zm00001d045711_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	MATLKASILAILGFAFFCGAALAARDLSDDSAMVARHEQWMAQYSRVYKDASEKARRFEV FKANVKFIESFNAGGNNKFWLGVNQFADLTNDEFRSIKTNKGFKSSNMKIPTGFRYENVS VDALPTTIDWRTKGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLVSLAEQELVDCD VHGEDQGCEGGLMDDAFKFIINNGGLTTESSYPYTAADGKCKSGSNSAATIKGYEDVPAN DEAALMKAVANQPVSVAVDGGDMTFQFYSSGVMTGSCGTDLDHGIAAIGYGKTSDGTKYW LMKNSWGTTWGENGYLRMEKDISDKRGMCGLAMEPSYPTE

Transcript Sequence

Transcript ID	Zm00001d045711_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:34739030:34740154:1 gene:Zm00001d045711 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ATGGCCACCCTCAAGGCATCGATCTTGGCCATCCTTGGTTTCGCCTTCTTCTGCGGTGCT GCCTTGGCTGCCCGCGACCTGAGCGACGACTCTGCCATGGTGGCGAGGCATGAGCAGTGG ATGGCGCAGTACAGCCGCGTCTACAAAGACGCCTCCGAGAAGGCTCGGCGGTTCGAGGTG TTCAAGGCTAACGTTAAGTTCATCGAGTCGTTCAACGCTGGTGGGAATAATAAGTTCTGG CTCGGTGTCAACCAGTTCGCCGATCTCACCAACGACGAGTTCAGGTCTATCAAAACTAAT AAGGGCTTCAAATCTAGCAACATGAAGATCCCTACAGGATTTAGGTATGAGAATGTTAGC GTCGATGCGCTTCCGACGACCATCGATTGGAGGACCAAGGGCGCCGTCACTCCCATCAAG GATCAAGGTCAATGTGGTTGCTGCTGGGCGTTCTCAGCCGTGGCTGCCACCGAAGGCATC GTGAAAATCAGCACCGGTAAGCTCGTCTCTCTTGCAGAACAAGAGTTAGTGGATTGCGAT GTCCATGGCGAGGATCAAGGTTGTGAGGGTGGTTTGATGGACGATGCTTTCAAGTTCATC ATCAATAACGGTGGCCTAACCACGGAGTCCAGCTATCCTTACACTGCTGCAGATGGCAAG TGTAAGAGTGGATCAAATAGTGCCGCAACCATAAAGGGCTACGAGGATGTGCCAGCAAAT GATGAGGCTGCCTTGATGAAGGCCGTGGCAAACCAGCCTGTGTCGGTGGCAGTGGATGGT GGAGACATGACGTTCCAATTCTACTCTAGTGGTGTGATGACTGGCTCATGCGGTACTGAC TTAGATCATGGGATTGCAGCCATTGGTTATGGAAAGACCAGTGATGGTACTAAGTACTGG CTGATGAAGAATTCATGGGGCACGACTTGGGGCGAGAATGGATATCTCAGAATGGAGAAG GATATTTCGGACAAGAGGGGCATGTGTGGCCTAGCCATGGAGCCTTCCTACCCCACCGAG TAG