Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045703_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:9:33995308:34000710:-1 gene:Zm00001d045703 gene_biotype:protein_coding transcript_biotype:protein_coding description:NHL domain-containing protein
Sequence	ATGGTTGCTATGGCGGCGCCAGGGCGAGTGGCGCTCCTGGCCGCCGCACTCCTGTTCGGC GCCTTCTTCCCATCCGCGTTCGCCACGTCCTCGTACCCCGCAAGGCTTGCGGGCAGGCTC CTGTCCACCACGGCGTCGGCGGTGGCCAAGCAGCTGTGGTCGCTCAAATCGGCCGCCACC AAGACGGCGACGGCGTCCGTGGCGGGGCGGTCCATGGTGCGGTACGAGGGCGGGTACGCG GTGGACACGGTGTTCGACGGCAGCAAGCTGGGGATCGAGCCGCACGCCGCCCAGATCAAC CGCGCCGGCGACCTCCTCCTGCTCGACTCCATCAACAGCAACATCTACAGGGTCCAGCTG CCGTTGTCACCATATAGCAGACCAAAGCTCCTTGCTGGTTCTCCAGAAGGTTTATCTGGC CATGTTGATGGAAGACTGCGAGAAGCGAGGATGAACCATCCTAAGGGGTTCACTGTGGAT GATAGGGGCAACATTTATGTTGCAGATGCTATGAACATGGCAATAAGAAAGATCAGTGAC ACAGGGGTTACAACCATTGCTGGGGGGAAATCAATTAGAGGAGGGTACATAGATGAGCCC AGTGTCAGTGATGATGCAAAATTCTCAACCGATTTTGAAGTCCAATACATCAGCAGTACC TGCTCTCTCTTGGTCATTGATAGAGGAAACCAAGCAATTCGAGAAATTCCACTGAACGAT GATGACTGTGCATATCAGTATGAAGCTGGTTTTCCACTAGGGTTTGCATTGCTTTGTGCT GCTGGTTTCTTTGGTTATATGCTTGCATTGCTCCAACACCGGCTTTTAGGAATGCCGTCA ACAATCAATAAACCTCAAGCGCCTCCAAGACCCAGCATTGCAAGTATCCCTCCATACCAG AAACCTTTAAACCCTTATGTTCGTCAACCATTCATCCCAAGAGAAGAAACTGCAAGACAG GAACCTGAAGAGGGGTTCTTCACCTCAGCTGGAAAACTTGTTGGAGGGGCAAAATCATCT GTGGCTGAGGTATTTGGTTTCAAGAAGAAGAGCCTGAGCAACCCATACCATCAGCAGCAA CGAAGAGCTAACCCTTGGCCGGTGCAAGAAAGCTATGCCATCCCACACGACGAACCACCT CCGGCGCTGGACACGAGAGCACCAGCCCCTCAGAAGAACTACAGCTCCGAGAAGATCCAC TACGTCCGCCATGGGCACCCGTATTTCAACAGCTGGGACGGTCACCGTCTCCCTCAGCAG CAGCCGGACCAGCAGCTGTATCACCAGCAGCAGCAGCAGCACCTGCAGCAGCACAGGCAG TGCTCTGCAGGCCCCCAGACGTTTTACGAGCAGAGTTGTGAGGCTACAAACGAGGTCGTC TTTGGTGCGGTCCAGGAGGTGGACAGCAAGCGGCGAATGGTCGAGATCAAGGCTGTCAAC TACGGAGACACATTCTATGAACAGTACGGGATGCGGTACCGCAACAATTTCATCGGCTAC AACAACACTAACAACTATTGA

Peptide Sequence

PEP ID	Zm00001d045703_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:9:33995308:34000710:-1 gene:Zm00001d045703 transcript:Zm00001d045703_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:NHL domain-containing protein
Sequence	MVAMAAPGRVALLAAALLFGAFFPSAFATSSYPARLAGRLLSTTASAVAKQLWSLKSAAT KTATASVAGRSMVRYEGGYAVDTVFDGSKLGIEPHAAQINRAGDLLLLDSINSNIYRVQL PLSPYSRPKLLAGSPEGLSGHVDGRLREARMNHPKGFTVDDRGNIYVADAMNMAIRKISD TGVTTIAGGKSIRGGYIDEPSVSDDAKFSTDFEVQYISSTCSLLVIDRGNQAIREIPLND DDCAYQYEAGFPLGFALLCAAGFFGYMLALLQHRLLGMPSTINKPQAPPRPSIASIPPYQ KPLNPYVRQPFIPREETARQEPEEGFFTSAGKLVGGAKSSVAEVFGFKKKSLSNPYHQQQ RRANPWPVQESYAIPHDEPPPALDTRAPAPQKNYSSEKIHYVRHGHPYFNSWDGHRLPQQ QPDQQLYHQQQQQHLQQHRQCSAGPQTFYEQSCEATNEVVFGAVQEVDSKRRMVEIKAVN YGDTFYEQYGMRYRNNFIGYNNTNNY

Transcript Sequence

Transcript ID	Zm00001d045703_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:33995308:34000710:-1 gene:Zm00001d045703 gene_biotype:protein_coding transcript_biotype:protein_coding description:NHL domain-containing protein
Sequence	GTCCCCAAATGGCCTCCTCGCCCTCTTCACGTTTCCCTTCACCATAAGCACAGGCACCAC TCCCCCCCTGCAAGCTCCTCCCTCTCTCGGCTCTTGGTTCTTGCATTACTCTGTCAGCCC AGAGGCAGAGCAAGTAAGCAAATGGTTGCTATGGCGGCGCCAGGGCGAGTGGCGCTCCTG GCCGCCGCACTCCTGTTCGGCGCCTTCTTCCCATCCGCGTTCGCCACGTCCTCGTACCCC GCAAGGCTTGCGGGCAGGCTCCTGTCCACCACGGCGTCGGCGGTGGCCAAGCAGCTGTGG TCGCTCAAATCGGCCGCCACCAAGACGGCGACGGCGTCCGTGGCGGGGCGGTCCATGGTG CGGTACGAGGGCGGGTACGCGGTGGACACGGTGTTCGACGGCAGCAAGCTGGGGATCGAG CCGCACGCCGCCCAGATCAACCGCGCCGGCGACCTCCTCCTGCTCGACTCCATCAACAGC AACATCTACAGGGTCCAGCTGCCGTTGTCACCATATAGCAGACCAAAGCTCCTTGCTGGT TCTCCAGAAGGTTTATCTGGCCATGTTGATGGAAGACTGCGAGAAGCGAGGATGAACCAT CCTAAGGGGTTCACTGTGGATGATAGGGGCAACATTTATGTTGCAGATGCTATGAACATG GCAATAAGAAAGATCAGTGACACAGGGGTTACAACCATTGCTGGGGGGAAATCAATTAGA GGAGGGTACATAGATGAGCCCAGTGTCAGTGATGATGCAAAATTCTCAACCGATTTTGAA GTCCAATACATCAGCAGTACCTGCTCTCTCTTGGTCATTGATAGAGGAAACCAAGCAATT CGAGAAATTCCACTGAACGATGATGACTGTGCATATCAGTATGAAGCTGGTTTTCCACTA GGGTTTGCATTGCTTTGTGCTGCTGGTTTCTTTGGTTATATGCTTGCATTGCTCCAACAC CGGCTTTTAGGAATGCCGTCAACAATCAATAAACCTCAAGCGCCTCCAAGACCCAGCATT GCAAGTATCCCTCCATACCAGAAACCTTTAAACCCTTATGTTCGTCAACCATTCATCCCA AGAGAAGAAACTGCAAGACAGGAACCTGAAGAGGGGTTCTTCACCTCAGCTGGAAAACTT GTTGGAGGGGCAAAATCATCTGTGGCTGAGGTATTTGGTTTCAAGAAGAAGAGCCTGAGC AACCCATACCATCAGCAGCAACGAAGAGCTAACCCTTGGCCGGTGCAAGAAAGCTATGCC ATCCCACACGACGAACCACCTCCGGCGCTGGACACGAGAGCACCAGCCCCTCAGAAGAAC TACAGCTCCGAGAAGATCCACTACGTCCGCCATGGGCACCCGTATTTCAACAGCTGGGAC GGTCACCGTCTCCCTCAGCAGCAGCCGGACCAGCAGCTGTATCACCAGCAGCAGCAGCAG CACCTGCAGCAGCACAGGCAGTGCTCTGCAGGCCCCCAGACGTTTTACGAGCAGAGTTGT GAGGCTACAAACGAGGTCGTCTTTGGTGCGGTCCAGGAGGTGGACAGCAAGCGGCGAATG GTCGAGATCAAGGCTGTCAACTACGGAGACACATTCTATGAACAGTACGGGATGCGGTAC CGCAACAATTTCATCGGCTACAACAACACTAACAACTATTGAACAGCCTGTCTATTTCTT TGACTTCCCTGTCTCTCTTTTCCTTTCTTTTTTTCCATCTTAGTT