Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045695_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:33746028:33749898:1 gene:Zm00001d045695 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartyl protease APCB1
Sequence	ATGGAGGACGACGAGGGGAAGAAGCAGCACCAACGGATCATCCCCAACGCCAACGGCCAC GTCATGATCGTGGTCCCCGACGACGCGCACGCGCACGCGCTGCCCGCCTCCGCCTCCGCT CCTCCTCGTGACGCCGACGGCCCAGACGAGGAGAGCGGGGACGAGGAGGAGCGGACGCCG GCGGGGGCCACGTCCTCGCTGTGGCGAGCAGCGGTGCTGGCGCTCGCGGCGCTGGCGCTG GCGGCGGCGGCCTACGCCTGCCTGTACGCGGGTGGGGACGACGACGCCGGCGCGGCCTGG CGCCTCTTGGAGGCGCGGCGGCAGGAGGACGGCGGCGACGACGAGCACCCGGGCGGCCGC ACGTCCTTCCTGCTGCCGCTCTACCCGAAGCCACCACGCCGCGGCGGCGACGACTGGCCG CAGAATTCCACGTTATTCCCGCACTCGCTCGCCGGCAACCTCTTCCCGGAAGGGCTATAC TACACCGCTATCTCTTTGGGCAGTCCTCCAAGGCCTTATTTTCTTGACGTCGACACTGGG AGCCACACAACATGGGTCCAGTGCGACGCGCCGCCATGCGCGAGCTGTGCAAAGGGAGCT CACCCTTTATATAGGCCCGCAAGGACGGCGGATGCACTTCCTGCCAGCGACCCACTTTGT GAAGGAGCCCAGCATGAGAACCCAAACCAGTGCGACTATGAGATCAGCTATGCCGACGGA AGCTCCTCCATGGGCGTTTATGTAAGGGACAGTATGCAATTCGTCGGCGAAGATGGTGAA AGGGAGAATGCAGACATTGTGTTTGGGTGCGGGTACGACCAGCAGGGAGTTCTTTTGAAC GCACTAGAAACCACCGACGGAGTTCTCGGCCTGACCAACAAGGCACTGAGCCTTCCTACA CAGCTAGCCAGCAGAGGTATCATTTCCAATGCGTTCGGCCACTGCATGTCGACAGATCCC AGCGGTGCTGGTGGTTACTTGTTTCTTGGCGACGATTACATTCCCAGGTGGGGAATGACT TGGGTCCCTATCCGCGATGGTCCAGCAGATGATGTACGCAGAGCCCAAGTCAAGCAGATA AACCATGGGGATCAACAGCTCAATGCGCAAGGGAAGTTGACTCAAGTGGTCTTTGACACT GGGTCCACATACACATATTTCCCAGACGAGGCGCTTACAAGATTGATATCTTCGCTGAAG GAGGCTGCATCCCCAAGGTTCGTACAAGATGACTCGGACAAAACACTTCCTTTCTGCATG AAATCTGATTTTCCAGTGAGGTCTGTGGAGGATGTGAAGCATTTTTTCAAGCCCTTGAGT CTGCAATTCGAGAAACGGTTTTTCTTCTCCAGGACCTTCAACATCCGCCCCGAACATTAC TTGGTCATCAGTGACAAGGGCAATGTCTGCCTCGGGGTGCTCAATGGGACAACGATCGGT TACGATTCAGTAGTAATAGTCGGAGATGTTTCTCTTCGTGGGAAATTGGTTGCTTACGAC AACGATAAGAATGAGGTCGGGTGGGTTGATTTCGACTGCACCAACCCTCGCAAACGAAGC AGGATTCCTTCCTTCCTGCGACGAGCGTTGCGCAACCAACTTCTGTAA

Peptide Sequence

PEP ID	Zm00001d045695_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:33746028:33749898:1 gene:Zm00001d045695 transcript:Zm00001d045695_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartyl protease APCB1
Sequence	MEDDEGKKQHQRIIPNANGHVMIVVPDDAHAHALPASASAPPRDADGPDEESGDEEERTP AGATSSLWRAAVLALAALALAAAAYACLYAGGDDDAGAAWRLLEARRQEDGGDDEHPGGR TSFLLPLYPKPPRRGGDDWPQNSTLFPHSLAGNLFPEGLYYTAISLGSPPRPYFLDVDTG SHTTWVQCDAPPCASCAKGAHPLYRPARTADALPASDPLCEGAQHENPNQCDYEISYADG SSSMGVYVRDSMQFVGEDGERENADIVFGCGYDQQGVLLNALETTDGVLGLTNKALSLPT QLASRGIISNAFGHCMSTDPSGAGGYLFLGDDYIPRWGMTWVPIRDGPADDVRRAQVKQI NHGDQQLNAQGKLTQVVFDTGSTYTYFPDEALTRLISSLKEAASPRFVQDDSDKTLPFCM KSDFPVRSVEDVKHFFKPLSLQFEKRFFFSRTFNIRPEHYLVISDKGNVCLGVLNGTTIG YDSVVIVGDVSLRGKLVAYDNDKNEVGWVDFDCTNPRKRSRIPSFLRRALRNQLL

Transcript Sequence

Transcript ID	Zm00001d045695_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:33746028:33749898:1 gene:Zm00001d045695 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartyl protease APCB1
Sequence	GACCGACCTCTTTTTTTTTCCTGGGCAACTGAATCGCACGCGGAAATCCCCGTCATGCCC CCCAGAGGGACCACTAGCGGCCCCGCCCCGCCCCGCCCCCACCTCGCGGCGGCTCAAGTC AAACCGGGCGCGCTATACCTATAGCCAGCGCCATCCGCGACCCGCAGGCAGGCCTCAGCG GGGTCGTCGGGACTCGGGACTCGGTCCTCGGATTCGGAGGCGGACCAGTGATATACCAAA CCCAGGCCGCGAAACAAACCAGTCGCCGACCTCCCTCCATCCTTCCCTCTCAGGCACGCA GCTCGCGTGGCATTGCGTTGCGCGGCCTGCTTCTCTCCGGTCTCCACCGCGCCGCGATCG ACAGCCCGGCCAGCGAGCTCCTCTCCTCCGCCTTCTCCTCTTCTACCGCTCCCGATCACG CGGCCGCGACATGGAGGACGACGAGGGGAAGAAGCAGCACCAACGGATCATCCCCAACGC CAACGGCCACGTCATGATCGTGGTCCCCGACGACGCGCACGCGCACGCGCTGCCCGCCTC CGCCTCCGCTCCTCCTCGTGACGCCGACGGCCCAGACGAGGAGAGCGGGGACGAGGAGGA GCGGACGCCGGCGGGGGCCACGTCCTCGCTGTGGCGAGCAGCGGTGCTGGCGCTCGCGGC GCTGGCGCTGGCGGCGGCGGCCTACGCCTGCCTGTACGCGGGTGGGGACGACGACGCCGG CGCGGCCTGGCGCCTCTTGGAGGCGCGGCGGCAGGAGGACGGCGGCGACGACGAGCACCC GGGCGGCCGCACGTCCTTCCTGCTGCCGCTCTACCCGAAGCCACCACGCCGCGGCGGCGA CGACTGGCCGCAGAATTCCACGTTATTCCCGCACTCGCTCGCCGGCAACCTCTTCCCGGA AGGGCTATACTACACCGCTATCTCTTTGGGCAGTCCTCCAAGGCCTTATTTTCTTGACGT CGACACTGGGAGCCACACAACATGGGTCCAGTGCGACGCGCCGCCATGCGCGAGCTGTGC AAAGGGAGCTCACCCTTTATATAGGCCCGCAAGGACGGCGGATGCACTTCCTGCCAGCGA CCCACTTTGTGAAGGAGCCCAGCATGAGAACCCAAACCAGTGCGACTATGAGATCAGCTA TGCCGACGGAAGCTCCTCCATGGGCGTTTATGTAAGGGACAGTATGCAATTCGTCGGCGA AGATGGTGAAAGGGAGAATGCAGACATTGTGTTTGGGTGCGGGTACGACCAGCAGGGAGT TCTTTTGAACGCACTAGAAACCACCGACGGAGTTCTCGGCCTGACCAACAAGGCACTGAG CCTTCCTACACAGCTAGCCAGCAGAGGTATCATTTCCAATGCGTTCGGCCACTGCATGTC GACAGATCCCAGCGGTGCTGGTGGTTACTTGTTTCTTGGCGACGATTACATTCCCAGGTG GGGAATGACTTGGGTCCCTATCCGCGATGGTCCAGCAGATGATGTACGCAGAGCCCAAGT CAAGCAGATAAACCATGGGGATCAACAGCTCAATGCGCAAGGGAAGTTGACTCAAGTGGT CTTTGACACTGGGTCCACATACACATATTTCCCAGACGAGGCGCTTACAAGATTGATATC TTCGCTGAAGGAGGCTGCATCCCCAAGGTTCGTACAAGATGACTCGGACAAAACACTTCC TTTCTGCATGAAATCTGATTTTCCAGTGAGGTCTGTGGAGGATGTGAAGCATTTTTTCAA GCCCTTGAGTCTGCAATTCGAGAAACGGTTTTTCTTCTCCAGGACCTTCAACATCCGCCC CGAACATTACTTGGTCATCAGTGACAAGGGCAATGTCTGCCTCGGGGTGCTCAATGGGAC AACGATCGGTTACGATTCAGTAGTAATAGTCGGAGATGTTTCTCTTCGTGGGAAATTGGT TGCTTACGACAACGATAAGAATGAGGTCGGGTGGGTTGATTTCGACTGCACCAACCCTCG CAAACGAAGCAGGATTCCTTCCTTCCTGCGACGAGCGTTGCGCAACCAACTTCTGTAAAT ACTGGCTACTGTGAGACTGGCTATGCTTGTTCTTATTACAGACGTGCTATTCCGCGTCTG AATTCTGAAACTGCCATGGAACCCTCCTATAATCGTCGCTGTAATCGTGTGGAGGGATGT AACTACGAGGTAGTAAAAAAGCGGTTACAGGACAGGAAATAGTGGAAAGGTAGATAAGCA TAGATAGTATATAGTCAAAAGAGGTCATGTTTGCTATGTTGTAGAGATCTCTCACTTTTT AAGACTAAAGTGGGGAAGCATAATCCATAGCAGTTCATTTAAAAAAATTGGCTGGAGCAC TGCCATGTCATAGAGGCTGGGACAGTTGTGATACTTCTGATTGGTATTCAGTTTCATCAA CCATTTTCTGTTCGATGG