Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045675_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:32681305:32690688:-1 gene:Zm00001d045675 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:asparagine synthetase1 description: asparagine synthetase1
Sequence	ATGTGCGGCATCCTCGCTGTCCTCGGCGTCGCTGAGGTCTCCCTCGCCAAGCGCTCCCGC ATCATTGAGCTCTCGCGCAGGTTACGGCACCGAGGGCCTGATTGGAGTGGTTTGCACTGT CATGAGGATTGTTACCTTGCACACCAGCGGTTGGCTATTATCGATCCTACATCTGGAGAC CAGCCTTTGTACAATGAGGATAAAACAGTTGTTGTAACGGTGAACGGAGAGATCTATAAC CATGAAGAATTGAAAGCTAAGTTGAAAACTCATGAGTTCCAAACTGGCAGTGATTGTGAA GTTATAGCCCATCTTTACGAAGAATATGGCGAAGAATTTGTGGATATGTTGGATGGAATG TTCTCCTTTGTTCTTCTTGATACACGTGATAAAAGCTTCATCGCAGCTCGTGATGCTATT GGCATCTGCCCTTTATACATGGGATGGGGTCTTGATGGATCAGTCTGGTTTTCTTCAGAG ATGAAGGCATTGAGTGATGATTGTGAACGCTTCATAACATTTCCCCCAGGGCATCTCTAC TCCAGCAAGACAGGTGGTCTAAGGAGATGGTACAACCCACCATGGTTTTCAGAGACGGTC CCTTCAACCCCTTACAATGCTCTCTTCCTCCGGGAGATGTTTGAGAAGGCTGTTATTAAG AGGCTGATGACTGATGTGCCATTTGGTGTGCTTTTATCTGGTGGACTCGACTCTTCTTTG GTTGCATCTGTTGCTTCGCGGCACTTAAACGAAACAAAGGTTGACAGGCAGTGGGGAAAT AAATTGCATACTTTCTGTATAGGCTTGAAGGGTTCTCCTGATCTTAAAGCTGCTAGAGAA GTTGCTGATTACCTCAGCACTGTACATCATGAGTTCCACTTCACAGTGCAGGAGGGCATT GATGCCTTGGAAGAAGTCATCTACCATATTGAGACATATGATGTTACAACAATCAGAGCA AGTACCCCAATGTTTTTGATGTCACGCAAAATCAAATCTTTGGGTGTGAAGATGGTTATT TCTGGCGAAGGTTCAGATGAAATTTTTGGTGGTTACCTTTATTTTCACAAGGCACCAAAC AAGAAAGAATTCCATGAGGAAACATGTCGGAAGATAAAAGCACTACATCTGTATGACTGC TTGAGAGCTAACAAAGCAACTTCTGCCTGGGGTGTTGAGGCTCGTGTTCCATTCCTTGAC AAAAGTTTCATCAGTGTAGCAATGGACATTGATCCTGAATGGAAGATGATAAAACGTGAC CTCGGTCGAATTGAGAAATGGGTTATCCGTAATGCATTTGATGATGATGAGAGGCCCTAT TTACCTAAGCACATTCTCTACAGGCAAAAGGAACAGTTCAGTGATGGTGTTGGGTATAGT TGGATCGATGGATTGAAGGACCATGCCAGCCAACATGTCTCCGATTCCATGATGATGAAT GCTGGCTTTGTTTACCCAGAGAACACACCCACAACAAAAGAAGGGTACTACTACAGAATG ATATTCGAGAAATTCTTTCCCAAGCCTGCAGCAAGGTCAACTGTTCCTGGAGGTCCTAGT GTGGCCTGCAGCACTGCCAAAGCTGTTGAATGGGACGCATCCTGGTCCAAGAACCTTGAT CCTTCTGGCCGTGCTGCTTTGGGTGTTCACGATGCTGCGTATGAAGACACTGCAGGGAAA ACTCCTGCCTCTGCTGATCCTGTCTCAGACAAGGGCCTTCGTCCAGCTATTGGCGAAAGC CTAGGGACACCCGTTGCTTCAGCCACAGCTGTCTAA

Peptide Sequence

PEP ID	Zm00001d045675_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:32681305:32690688:-1 gene:Zm00001d045675 transcript:Zm00001d045675_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:asparagine synthetase1 description: asparagine synthetase1
Sequence	MCGILAVLGVAEVSLAKRSRIIELSRRLRHRGPDWSGLHCHEDCYLAHQRLAIIDPTSGD QPLYNEDKTVVVTVNGEIYNHEELKAKLKTHEFQTGSDCEVIAHLYEEYGEEFVDMLDGM FSFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDCERFITFPPGHLY SSKTGGLRRWYNPPWFSETVPSTPYNALFLREMFEKAVIKRLMTDVPFGVLLSGGLDSSL VASVASRHLNETKVDRQWGNKLHTFCIGLKGSPDLKAAREVADYLSTVHHEFHFTVQEGI DALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPN KKEFHEETCRKIKALHLYDCLRANKATSAWGVEARVPFLDKSFISVAMDIDPEWKMIKRD LGRIEKWVIRNAFDDDERPYLPKHILYRQKEQFSDGVGYSWIDGLKDHASQHVSDSMMMN AGFVYPENTPTTKEGYYYRMIFEKFFPKPAARSTVPGGPSVACSTAKAVEWDASWSKNLD PSGRAALGVHDAAYEDTAGKTPASADPVSDKGLRPAIGESLGTPVASATAV

Transcript Sequence

Transcript ID	Zm00001d045675_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:32681305:32690688:-1 gene:Zm00001d045675 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:asparagine synthetase1 description: asparagine synthetase1
Sequence	GCCGCCAACTACACATTCGACGGCCGAGATGCCGTGATTACCTGCGAAGCCCTAATTAAA TCACCATTCCCTGCCTAAAACTCCCATTTCGCCGTCCGTGACGCGAGAGACCTCTTCGCA TCCCGAGGCGGCGCTTTTGGGGTCGGAAGCGACACGGGCGCCGGGCGGGTCCGCGGGTGG TGGTGCTACTGCTAGCAAGCAGCAGCAGGCGACGCTAGGCGAGAGCCCCAGTCGGAGCAG GCCACCATGTGCGGCATCCTCGCTGTCCTCGGCGTCGCTGAGGTCTCCCTCGCCAAGCGC TCCCGCATCATTGAGCTCTCGCGCAGGTTACGGCACCGAGGGCCTGATTGGAGTGGTTTG CACTGTCATGAGGATTGTTACCTTGCACACCAGCGGTTGGCTATTATCGATCCTACATCT GGAGACCAGCCTTTGTACAATGAGGATAAAACAGTTGTTGTAACGGTGAACGGAGAGATC TATAACCATGAAGAATTGAAAGCTAAGTTGAAAACTCATGAGTTCCAAACTGGCAGTGAT TGTGAAGTTATAGCCCATCTTTACGAAGAATATGGCGAAGAATTTGTGGATATGTTGGAT GGAATGTTCTCCTTTGTTCTTCTTGATACACGTGATAAAAGCTTCATCGCAGCTCGTGAT GCTATTGGCATCTGCCCTTTATACATGGGATGGGGTCTTGATGGATCAGTCTGGTTTTCT TCAGAGATGAAGGCATTGAGTGATGATTGTGAACGCTTCATAACATTTCCCCCAGGGCAT CTCTACTCCAGCAAGACAGGTGGTCTAAGGAGATGGTACAACCCACCATGGTTTTCAGAG ACGGTCCCTTCAACCCCTTACAATGCTCTCTTCCTCCGGGAGATGTTTGAGAAGGCTGTT ATTAAGAGGCTGATGACTGATGTGCCATTTGGTGTGCTTTTATCTGGTGGACTCGACTCT TCTTTGGTTGCATCTGTTGCTTCGCGGCACTTAAACGAAACAAAGGTTGACAGGCAGTGG GGAAATAAATTGCATACTTTCTGTATAGGCTTGAAGGGTTCTCCTGATCTTAAAGCTGCT AGAGAAGTTGCTGATTACCTCAGCACTGTACATCATGAGTTCCACTTCACAGTGCAGGAG GGCATTGATGCCTTGGAAGAAGTCATCTACCATATTGAGACATATGATGTTACAACAATC AGAGCAAGTACCCCAATGTTTTTGATGTCACGCAAAATCAAATCTTTGGGTGTGAAGATG GTTATTTCTGGCGAAGGTTCAGATGAAATTTTTGGTGGTTACCTTTATTTTCACAAGGCA CCAAACAAGAAAGAATTCCATGAGGAAACATGTCGGAAGATAAAAGCACTACATCTGTAT GACTGCTTGAGAGCTAACAAAGCAACTTCTGCCTGGGGTGTTGAGGCTCGTGTTCCATTC CTTGACAAAAGTTTCATCAGTGTAGCAATGGACATTGATCCTGAATGGAAGATGATAAAA CGTGACCTCGGTCGAATTGAGAAATGGGTTATCCGTAATGCATTTGATGATGATGAGAGG CCCTATTTACCTAAGCACATTCTCTACAGGCAAAAGGAACAGTTCAGTGATGGTGTTGGG TATAGTTGGATCGATGGATTGAAGGACCATGCCAGCCAACATGTCTCCGATTCCATGATG ATGAATGCTGGCTTTGTTTACCCAGAGAACACACCCACAACAAAAGAAGGGTACTACTAC AGAATGATATTCGAGAAATTCTTTCCCAAGCCTGCAGCAAGGTCAACTGTTCCTGGAGGT CCTAGTGTGGCCTGCAGCACTGCCAAAGCTGTTGAATGGGACGCATCCTGGTCCAAGAAC CTTGATCCTTCTGGCCGTGCTGCTTTGGGTGTTCACGATGCTGCGTATGAAGACACTGCA GGGAAAACTCCTGCCTCTGCTGATCCTGTCTCAGACAAGGGCCTTCGTCCAGCTATTGGC GAAAGCCTAGGGACACCCGTTGCTTCAGCCACAGCTGTCTAACCTTATGTTTATCACCCA GCAATGCTTGAAACAGCAAAGGTTGTCCATTGCTTGTTTCAGTTTCCTTCCGATCATGTT TTTAGTTCCATCAATCAAGCAATGGAGACATGCTTGTGCTTCATACTTGGCAGCATCGTG TTTGGGTTTTCACTGGGCAGTACTGTTTAATTTTTATGGACTGAAAAGACTCAGTTTTGT AAATATTCGTCACTGTGACCAATTCCTGTGGTGGTTTATGTGATTTGCAGATTGCAGTGG TTAGTGTATCTTCC