Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045661_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:32056769:32058471:1 gene:Zm00001d045661 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-CO-like-transcription factor 4 description:Zinc finger protein CONSTANS-LIKE 16

Sequence

ATGATTGCCACGACCACGACCGGCAGCTCGGCGAAGGCGGCGGCGGTGGGTGGCAAGGAG
GCGCGCGCCTGTGACGCGTGCCTGCGCCGGCGGGCCAGGTGGTACTGCGCAGCGGACGAC
GCGTTCCTGTGCCAAGTCTGCGACACGTCGGTGCACTCCGCGAACTCGCTCGCGCGGCGT
CACGAGAGGCTGCGTCTGCGCCCCACGTCTCCGCTGCAGACGCCGCCGCCTCCCACGCCG
GCGTCAGCGAATCGCGAGAGCCACGACGAGGTGGTGCCGGCGTGGTTCAAGCGCAAGGCG
CGCACCCCGCGCGGTGGGCGCGCCAAAAGCGATGTGCGGACGTTGTCGCGGCGCCTCGTT
GTGCCCCATGCGGCGGGCGGGGACTCGCCAGATGGTCGGAACGACGAGGGGGAGTTCGAG
GCCGAGGAGCCGGAGGAGGAGGTGCTTTACCGCGTGCCTGTCTTTGACCCTGCCCTGGCA
GAGTTCTGCTCGCCCCAGCCTCTTGAGGACGCGGCCGCTCTCGCGTCGTCCTGCAACGAA
GACGGCGCCGTCGAGGACCCGGCGAAGACAGATCGAGAGACACCTGCAGCGGCGCCGCTG
GTGCAGTTTTTCCCCGACGGAGGTCATGCCAACTTCGGGCCGACCGACGCCGAGCTCAGG
GAGTTCGCCGCGGACATGGAGGCCTTGCTCGGGTACGGCCTGGACGACGGCAACGAGGAG
AGCTCGTCGTTCTGCATGGAGACGCTGGGCCTCCTGGAACCGGTGGAAGTGGGTGAAGAC
GCGTCGCGAGTCAAGGTGGAGACTGACGCCGGCAGTGCCTGCGAAGCCAGTGGCACGCTG
GCGTGCGCCCTCGAGCTGCTGGACCCAGATGCATCTGACGAGATGCTGGACATCGACTTC
AACTACGGCTCGCCTCAGGACACGACGACGACCGAGAATGCCGCGAGCAGCAGCCACACG
GGAACCGACGGCCAGTTCTTGCAGACGAGCCTCTCGCTCACCCTCAACTACGAGGCCATC
ATCCAGAGCTGGGGGAGCTCGCCGTGGACCGGCGGCGCCGAACGACCACATGTCAAGCTC
GACGACAGCTGGCCCCACGACTGCACGAACATGTGGGTTGTGGGACGAGGAATGGTCGGC
CACGGCGGTGAGGACTTGCTGGGCACGCCGAGGCTGGGGCAGGGCATGGACGACGTTGGC
CGGGAGGCCCGAGTGTCGCGGTACCGGGAGAAGCGCAGGACGCGGCTCTTCTCCAAGAAG
ATCCGGTACGAGGTGCGCAAGCTCAACGCCGAGAAGCGGCCACGGATGAAGGGCCGCTTC
GTCAAGCGCGCCACCGCCGGTGGCAGTCTCACCATCGCTGGCCTCGCTTAG

Peptide Sequence

PEP ID

Zm00001d045661_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:32056769:32058471:1 gene:Zm00001d045661 transcript:Zm00001d045661_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-CO-like-transcription factor 4 description:Zinc finger protein CONSTANS-LIKE 16

Sequence

MIATTTTGSSAKAAAVGGKEARACDACLRRRARWYCAADDAFLCQVCDTSVHSANSLARR
HERLRLRPTSPLQTPPPPTPASANRESHDEVVPAWFKRKARTPRGGRAKSDVRTLSRRLV
VPHAAGGDSPDGRNDEGEFEAEEPEEEVLYRVPVFDPALAEFCSPQPLEDAAALASSCNE
DGAVEDPAKTDRETPAAAPLVQFFPDGGHANFGPTDAELREFAADMEALLGYGLDDGNEE
SSSFCMETLGLLEPVEVGEDASRVKVETDAGSACEASGTLACALELLDPDASDEMLDIDF
NYGSPQDTTTTENAASSSHTGTDGQFLQTSLSLTLNYEAIIQSWGSSPWTGGAERPHVKL
DDSWPHDCTNMWVVGRGMVGHGGEDLLGTPRLGQGMDDVGREARVSRYREKRRTRLFSKK
IRYEVRKLNAEKRPRMKGRFVKRATAGGSLTIAGLA

Transcript Sequence

Transcript ID

Zm00001d045661_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:32056769:32058471:1 gene:Zm00001d045661 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-CO-like-transcription factor 4 description:Zinc finger protein CONSTANS-LIKE 16

Sequence

ACATTTTTTCCCTAACATCTACAGTACATACAAAAACTCAGAGTGTACGTCGGCACATGT
GGATACTATAGGTCCCATCCTACTACATTCAGCGTAGAAGAAGCCATCACTGAGTAGCAC
GCCGGCACACCGCTTTGAAGGGAAATGATTGCCACGACCACGACCGGCAGCTCGGCGAAG
GCGGCGGCGGTGGGTGGCAAGGAGGCGCGCGCCTGTGACGCGTGCCTGCGCCGGCGGGCC
AGGTGGTACTGCGCAGCGGACGACGCGTTCCTGTGCCAAGTCTGCGACACGTCGGTGCAC
TCCGCGAACTCGCTCGCGCGGCGTCACGAGAGGCTGCGTCTGCGCCCCACGTCTCCGCTG
CAGACGCCGCCGCCTCCCACGCCGGCGTCAGCGAATCGCGAGAGCCACGACGAGGTGGTG
CCGGCGTGGTTCAAGCGCAAGGCGCGCACCCCGCGCGGTGGGCGCGCCAAAAGCGATGTG
CGGACGTTGTCGCGGCGCCTCGTTGTGCCCCATGCGGCGGGCGGGGACTCGCCAGATGGT
CGGAACGACGAGGGGGAGTTCGAGGCCGAGGAGCCGGAGGAGGAGGTGCTTTACCGCGTG
CCTGTCTTTGACCCTGCCCTGGCAGAGTTCTGCTCGCCCCAGCCTCTTGAGGACGCGGCC
GCTCTCGCGTCGTCCTGCAACGAAGACGGCGCCGTCGAGGACCCGGCGAAGACAGATCGA
GAGACACCTGCAGCGGCGCCGCTGGTGCAGTTTTTCCCCGACGGAGGTCATGCCAACTTC
GGGCCGACCGACGCCGAGCTCAGGGAGTTCGCCGCGGACATGGAGGCCTTGCTCGGGTAC
GGCCTGGACGACGGCAACGAGGAGAGCTCGTCGTTCTGCATGGAGACGCTGGGCCTCCTG
GAACCGGTGGAAGTGGGTGAAGACGCGTCGCGAGTCAAGGTGGAGACTGACGCCGGCAGT
GCCTGCGAAGCCAGTGGCACGCTGGCGTGCGCCCTCGAGCTGCTGGACCCAGATGCATCT
GACGAGATGCTGGACATCGACTTCAACTACGGCTCGCCTCAGGACACGACGACGACCGAG
AATGCCGCGAGCAGCAGCCACACGGGAACCGACGGCCAGTTCTTGCAGACGAGCCTCTCG
CTCACCCTCAACTACGAGGCCATCATCCAGAGCTGGGGGAGCTCGCCGTGGACCGGCGGC
GCCGAACGACCACATGTCAAGCTCGACGACAGCTGGCCCCACGACTGCACGAACATGTGG
GTTGTGGGACGAGGAATGGTCGGCCACGGCGGTGAGGACTTGCTGGGCACGCCGAGGCTG
GGGCAGGGCATGGACGACGTTGGCCGGGAGGCCCGAGTGTCGCGGTACCGGGAGAAGCGC
AGGACGCGGCTCTTCTCCAAGAAGATCCGGTACGAGGTGCGCAAGCTCAACGCCGAGAAG
CGGCCACGGATGAAGGGCCGCTTCGTCAAGCGCGCCACCGCCGGTGGCAGTCTCACCATC
GCTGGCCTCGCTTAGTGCCGCCGGCATTCTGCATGCTTGGTTGTGCCTGCGTGGCTGCAT
ATATATATATACTGGAGGTGC