Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045644_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:30775101:30779640:1 gene:Zm00001d045644 gene_biotype:protein_coding transcript_biotype:protein_coding description:Encodes a protein whose expression is responsive to nematode infection.
Sequence	ATGGGCAACAGCATCGGCGGGCGGCGCAAGGGCGCCAAGGTGATGCAGCTGGACGGGACG GCGTTCCGCGTGAAGCCTCCGGCGTCCGCGGGCGCGGTGCTGCGCGACCACCCGGGGTTC CAGCTGCTCGAGTCCGAGGAGGTGAAGCTGCTGGGCGTGCGCGCCCGGCCGCTGGCGCAC GACGCACAGCTACGCCCGGGCAGGCTCTACTTCCTCGTGGTGCTGCCCCGGCCGTCCGTC CCGCCGCGCCGCGCCTGGTCCGGCGCGCTCCAGGTGGGCGCGCGGGAGCGGCTGGAGTCG CTCATGCTCACGCGCCGCTCCACCTCCGACCTCTCCCTGCCGGCCTCCGCGGCCACGGCC ACGGCCACGGCGCCGCCGTCCCCGCTCTCCGAGTCTGAGGGCGGGCCTGTCCGGCTCCGG ATGCGCTTGCCCAAGGCGCAGGTCGAGAGGCTCATGGCCGAGAGCCGCGACGGCGCCGAG GCCGCCGCCCGGATCATGCAGCTCTGCGCCGCCGCTAATAACCCCGCCAGCGGCGCCGCC ACGCCCGAGAGGGGGATCTTGCGGACGCCCGAGCGGAGGAGCCCGCGGTTCGTGCCCACT CCGGACTGGGGCGTCGGCGTCGGCGCCACCGCCGCCTCGTCCCCGCAGACGCCCGAGCGG AGCCCCAGGTTCGCGGCGATGACGCCCGACTGGGGGACTGATGGGTTCATGGTGCCGGCG GGCGTTGCGACGGCGCCCAGGACGCCGGAGAGGTGGCCCGCGCTGCCCCGCACCCCGGAG TACGCGTCGCCCGACGTCAGGGCCAGCCGGAAAGAGAAGCGAACGCGGTTCGTGGCGCTG CCGGATGAGATAATCGCAGTCAAGCAGTCGTCCGTGGACACCCAGTCTCTACGCACGGCA TCCTCCGCAGGAGAGTTCGAGGCGCCATACCGCGACCGGTGCGAGCAGCCACGCAGGAAC GAGGCCCTCGACGTCGTCTGCGAACTGTACCGCGACCGGCACGAGCAGACGCACGGGTAC GAGACCCCCGATGCGCCGTCGTTCTCGTCAGGCATCGATGACGACATCGACGTCGTGGAG GAGCTCCACATCCCGGTGAGAGCCCACCAGAAGGAGCAAGCGCATGAGTTCGAGCGCGCC GAGGACACTGCGCCACCCAGTCATGCTCTGTGCTACGACCCGCACCGCGCCGATGTCCCC ACGGTGCACTCCGCGCTCAAAGTGTTCGACCAAATGTCTAGCCGTGGCTCGGACGCCAGC CCAGGCTTTCGGGATCTGGTTTTCCTTGTCGCGTCTGCCTCCTCGTCCTGCAGCGTGGAG GATGAGCGCCCCAAGGTGCCTTCCTCCATCGGCAACGACATGCACTTGGTCTCCAGGTTC CTGTCCTCAAGGCTCGATGGCGGCGTGAAGAAGCCGTCGTAG

Peptide Sequence

PEP ID	Zm00001d045644_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:30775101:30779640:1 gene:Zm00001d045644 transcript:Zm00001d045644_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Encodes a protein whose expression is responsive to nematode infection.
Sequence	MGNSIGGRRKGAKVMQLDGTAFRVKPPASAGAVLRDHPGFQLLESEEVKLLGVRARPLAH DAQLRPGRLYFLVVLPRPSVPPRRAWSGALQVGARERLESLMLTRRSTSDLSLPASAATA TATAPPSPLSESEGGPVRLRMRLPKAQVERLMAESRDGAEAAARIMQLCAAANNPASGAA TPERGILRTPERRSPRFVPTPDWGVGVGATAASSPQTPERSPRFAAMTPDWGTDGFMVPA GVATAPRTPERWPALPRTPEYASPDVRASRKEKRTRFVALPDEIIAVKQSSVDTQSLRTA SSAGEFEAPYRDRCEQPRRNEALDVVCELYRDRHEQTHGYETPDAPSFSSGIDDDIDVVE ELHIPVRAHQKEQAHEFERAEDTAPPSHALCYDPHRADVPTVHSALKVFDQMSSRGSDAS PGFRDLVFLVASASSSCSVEDERPKVPSSIGNDMHLVSRFLSSRLDGGVKKPS

Transcript Sequence

Transcript ID	Zm00001d045644_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:30775101:30779640:1 gene:Zm00001d045644 gene_biotype:protein_coding transcript_biotype:protein_coding description:Encodes a protein whose expression is responsive to nematode infection.
Sequence	CACAAACAACACCTCTCCATCGCGAGCTGCGAAAGACGAGCAGAGGGAGGGAGGGCAAAG CGAAGAGAAACACAACCGCGCCACCCCCGCACCCACCCACCCACCCACGCACCCGGAGCG AAGGGGAGACCGGCCGCAACAGAAGGCAGAGAGAGCTAGAGCCCCGCGCGCGGCAATGGG CAACAGCATCGGCGGGCGGCGCAAGGGCGCCAAGGTGATGCAGCTGGACGGGACGGCGTT CCGCGTGAAGCCTCCGGCGTCCGCGGGCGCGGTGCTGCGCGACCACCCGGGGTTCCAGCT GCTCGAGTCCGAGGAGGTGAAGCTGCTGGGCGTGCGCGCCCGGCCGCTGGCGCACGACGC ACAGCTACGCCCGGGCAGGCTCTACTTCCTCGTGGTGCTGCCCCGGCCGTCCGTCCCGCC GCGCCGCGCCTGGTCCGGCGCGCTCCAGGTGGGCGCGCGGGAGCGGCTGGAGTCGCTCAT GCTCACGCGCCGCTCCACCTCCGACCTCTCCCTGCCGGCCTCCGCGGCCACGGCCACGGC CACGGCGCCGCCGTCCCCGCTCTCCGAGTCTGAGGGCGGGCCTGTCCGGCTCCGGATGCG CTTGCCCAAGGCGCAGGTCGAGAGGCTCATGGCCGAGAGCCGCGACGGCGCCGAGGCCGC CGCCCGGATCATGCAGCTCTGCGCCGCCGCTAATAACCCCGCCAGCGGCGCCGCCACGCC CGAGAGGGGGATCTTGCGGACGCCCGAGCGGAGGAGCCCGCGGTTCGTGCCCACTCCGGA CTGGGGCGTCGGCGTCGGCGCCACCGCCGCCTCGTCCCCGCAGACGCCCGAGCGGAGCCC CAGGTTCGCGGCGATGACGCCCGACTGGGGGACTGATGGGTTCATGGTGCCGGCGGGCGT TGCGACGGCGCCCAGGACGCCGGAGAGGTGGCCCGCGCTGCCCCGCACCCCGGAGTACGC GTCGCCCGACGTCAGGGCCAGCCGGAAAGAGAAGCGAACGCGGTTCGTGGCGCTGCCGGA TGAGATAATCGCAGTCAAGCAGTCGTCCGTGGACACCCAGTCTCTACGCACGGCATCCTC CGCAGGAGAGTTCGAGGCGCCATACCGCGACCGGTGCGAGCAGCCACGCAGGAACGAGGC CCTCGACGTCGTCTGCGAACTGTACCGCGACCGGCACGAGCAGACGCACGGGTACGAGAC CCCCGATGCGCCGTCGTTCTCGTCAGGCATCGATGACGACATCGACGTCGTGGAGGAGCT CCACATCCCGGTGAGAGCCCACCAGAAGGAGCAAGCGCATGAGTTCGAGCGCGCCGAGGA CACTGCGCCACCCAGTCATGCTCTGTGCTACGACCCGCACCGCGCCGATGTCCCCACGGT GCACTCCGCGCTCAAAGTGTTCGACCAAATGTCTAGCCGTGGCTCGGACGCCAGCCCAGG CTTTCGGGATCTGGTTTTCCTTGTCGCGTCTGCCTCCTCGTCCTGCAGCGTGGAGGATGA GCGCCCCAAGGTGCCTTCCTCCATCGGCAACGACATGCACTTGGTCTCCAGGTTCCTGTC CTCAAGGCTCGATGGCGGCGTGAAGAAGCCGTCGTAG