Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045617_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:28909587:28912359:1 gene:Zm00001d045617 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 117 description:Protein NTM1-like 9
Sequence	ATGCGCCCTTACACTGATCATCCATTTTTTGGCAATGCTGGCGACCAAGATCTTTCAGCG TATATAGACAGTATCATCTCTCATCAGGATCTGGAAGGCTTGTTGGCCAGCCCTTCTTTG GCTGACATGGTTGAGCAGGCTACTGTAAATGTTGAGCCCCACCCTATTAATGTACCCGTT CTAGACAACAGCTCAAACAGCAACAGATTGGCTGAAAACAGCCGTGGAAAAGTTGGTTCT GAAACGTTGCTCCTAATCAAGGGTACAGATGGCACAGGTGCTGCTGCTTGCTCTTCTTCT GCAACCAAAATACTCCAAGACAATACTGATGATCACACAGGAGCTCAAAGTAACTTGGCT TCCAGTGCATCAGCTCAAGTGTCTCACTTTTACAACCAATATGAACTCCAATCGGCATTC GTCCCTGAAATGGAACCACCAAATAGTGGAACCTTGTGCTCTGCAGCCTCCCCGACTCCC CATCCCCAGCACTTGTTCAACGGTGTGGTAGCTTCAGATGTCTTCAATGGAATCCAAGGA TGGCCAGCGGAACCTTTGACGGATCCACACCAAGGGAATGCACCAAGAAGGATCCGCCTT GCGCACTCTATTCAGAGGGCATCAGTCACTGAGCCTGTACTAACTTCTGATGTGGAGGAT GAAGATGAACCGGGAATATGTTATAGCGCAGACAGTTCATCCGCCAGCAATACCGAGGAT TATGCCAATGTGTTCTCCCAAACTATGGCTGGAGAAACAATGCGTATTCAACGTGGAGGG GTGATATCTACTCAAGTAGTTTCGTCAACAGAAAAGCTACAAGATTTCACATTTGATGAA GGTACACTGCTACATGGTGAGCTGCATCATGGAGGCAATCTCAGGCAGCGGCGCACGGAG GAGACGAGGCAGGATGTTCGTGATGGCATGCAGCACAGCGTCCATGTGACTAGAGTGGCA GTGCCATCCTTGAGAAGGAAAGGAGAGGCTGCACAGATTGGTTCAGTGGTGCGGTTGCTC CTTTTGGTTCTCCTCCTCGTCGTCATCTTTGTATTTGTAGGATTATGGAAATGTAGCTCG TTCAGATTGTTGCATTAG

Peptide Sequence

PEP ID	Zm00001d045617_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:28909587:28912359:1 gene:Zm00001d045617 transcript:Zm00001d045617_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 117 description:Protein NTM1-like 9
Sequence	MRPYTDHPFFGNAGDQDLSAYIDSIISHQDLEGLLASPSLADMVEQATVNVEPHPINVPV LDNSSNSNRLAENSRGKVGSETLLLIKGTDGTGAAACSSSATKILQDNTDDHTGAQSNLA SSASAQVSHFYNQYELQSAFVPEMEPPNSGTLCSAASPTPHPQHLFNGVVASDVFNGIQG WPAEPLTDPHQGNAPRRIRLAHSIQRASVTEPVLTSDVEDEDEPGICYSADSSSASNTED YANVFSQTMAGETMRIQRGGVISTQVVSSTEKLQDFTFDEGTLLHGELHHGGNLRQRRTE ETRQDVRDGMQHSVHVTRVAVPSLRRKGEAAQIGSVVRLLLLVLLLVVIFVFVGLWKCSS FRLLH

Transcript Sequence

Transcript ID	Zm00001d045617_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:28909587:28912359:1 gene:Zm00001d045617 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 117 description:Protein NTM1-like 9
Sequence	AGGCGGACCATGGTCATGGTCATGCCTTTTACTCCTTTCTCGTCTGCCAGCGCGCGGGGG AAGGAGGGACGAAAGTGATGCAGCCGCCGCCGCAGCTGCCGGCGGCTTTGCCGGTAGGGT TCCGCTTCCGCCCTACGGACGAGGAGCTGGTGCTACACTACCTCAAGCCTAAGATCGCGG GTCGCGCGCACGCGGATTTGCTCCTCATCCCCGATGTCGACCTCTCGGCGTGCGAGCCTT GGGAGCTGCCCGCTAAGGCCCTCATCAGGTCCGACGATCCCGAGTGGTTCTTCTTCGCGC CCCTAGACCGCAAGTACCCTGGAGGCCACCGCTCCAACCGCTCCACCGCAGCCGGGTACT GGAAGGCCACGGGCAAGGACCGCCTCATCCGCTCGCGCCCAGCAGGCACCCTCATCGGCG TCAAGAAGACGCTCGTCTTCCACAGAGGCAGGGCACCCCGAGGACACCGCACCGCCTGGA TCATGCACGAGTACCGTACGGCCGAGCCCCAGCTCCCACAAGGCCAAAACGGTAGCTTCG TGCTCTACCGCCTATTCAACAAGAACGAGGAGGAATCCGAAGCCTCAGACGCTGCCGATT CACCGTCCACGTCGTCTCCGCCCATCGCGCCGGAGGTGAAAACTGAGAATTTGAGCCAAC CGACTTCTGCCAAAATGTCTCCCCATATTGCAACTGTCAGTAGCAATGAGCCAACGTCTA ATCAGTTAACATCTCATTTCAATGAATGCACGCTGCACATTGATTCATGGTGTAACTGTA ACCTATAGCAGGGAGACGTTAATCTTCTGGATGTGTTAACCCAGCTTCCAGACCTACATC CTGAGCAAGCATTCGATGGATTCCCTACCATCACCTCTCCTATGCGCCCTTACACTGATC ATCCATTTTTTGGCAATGCTGGCGACCAAGATCTTTCAGCGTATATAGACAGTATCATCT CTCATCAGGATCTGGAAGGCTTGTTGGCCAGCCCTTCTTTGGCTGACATGGTTGAGCAGG CTACTGTAAATGTTGAGCCCCACCCTATTAATGTACCCGTTCTAGACAACAGCTCAAACA GCAACAGATTGGCTGAAAACAGCCGTGGAAAAGTTGGTTCTGAAACGTTGCTCCTAATCA AGGGTACAGATGGCACAGGTGCTGCTGCTTGCTCTTCTTCTGCAACCAAAATACTCCAAG ACAATACTGATGATCACACAGGAGCTCAAAGTAACTTGGCTTCCAGTGCATCAGCTCAAG TGTCTCACTTTTACAACCAATATGAACTCCAATCGGCATTCGTCCCTGAAATGGAACCAC CAAATAGTGGAACCTTGTGCTCTGCAGCCTCCCCGACTCCCCATCCCCAGCACTTGTTCA ACGGTGTGGTAGCTTCAGATGTCTTCAATGGAATCCAAGGATGGCCAGCGGAACCTTTGA CGGATCCACACCAAGGGAATGCACCAAGAAGGATCCGCCTTGCGCACTCTATTCAGAGGG CATCAGTCACTGAGCCTGTACTAACTTCTGATGTGGAGGATGAAGATGAACCGGGAATAT GTTATAGCGCAGACAGTTCATCCGCCAGCAATACCGAGGATTATGCCAATGTGTTCTCCC AAACTATGGCTGGAGAAACAATGCGTATTCAACGTGGAGGGGTGATATCTACTCAAGTAG TTTCGTCAACAGAAAAGCTACAAGATTTCACATTTGATGAAGGTACACTGCTACATGGTG AGCTGCATCATGGAGGCAATCTCAGGCAGCGGCGCACGGAGGAGACGAGGCAGGATGTTC GTGATGGCATGCAGCACAGCGTCCATGTGACTAGAGTGGCAGTGCCATCCTTGAGAAGGA AAGGAGAGGCTGCACAGATTGGTTCAGTGGTGCGGTTGCTCCTTTTGGTTCTCCTCCTCG TCGTCATCTTTGTATTTGTAGGATTATGGAAATGTAGCTCGTTCAGATTGTTGCATTAGC AGCTACTATTTGTGATTCAGGGGTATCAGTGCATTAGTAGCTAGTTTGCCTGGTTGTCTG ATCTCGTGAAGGAGCAGGGGAAAGTTTATGCAGGATTCACAATGCTCCTCTTGTCTGGCT TGACATAGAAATCTAAAAGTTGTGACTTGTGAGGCAACCTGTTGCCTTGTTCATATAATA ATAGAATGAAACTTGTGTTG