Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045610_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:28669387:28671873:1 gene:Zm00001d045610 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homogentisate 12-dioxygenase
Sequence

ATGGCCATGGAGGAGGAGCAGACACCACCCGAGCTGCGCTACCTCTCGGGCCTGGGCAAC
ACCTCCTTCACCACCCCGCGCGCCCGGAACCTGCGCACGTGGCTGTACCGGATCAAGCCG
TCGGTGACCCACGAACCCTTCTATCCGCGGAACCCCACCAACGAGCGCCTCGTCGGCGAG
TTCGACCGCACCACCACCGTCGCCACGCCCACGCAGCTGCGCTGGAGGCCCGCCGACGTG
CCCCTCCACCCGGGCCTCGACTTCATCGACGGACTCTACACCGTCTGCGGCGCCGGCAGC
TCATGCCTCCGACACGGATACGCCATCCACATGTATGCTGCTAACAAGCCCATGGATGGA
TGCTCCTTGTGCAATGCGGACGGTGACTTCCTCATTGTTCCCCAGCAAGGAAGGTTATTT
ATCACAACCGAGTGCGGAAGGCTGCTGGTTTCACCCGGCGAGATCGTCGTGATCCCTCAA
GGTCTCCGATTTGCTGTCGACTTGCCGGATGGCCCCTCGCGTGGCTATGTCTCTGAGATC
TTCGGCGCCCATTTTCAGCTCCCTGATCTTGGCCCAATTGGTGCCAATGGCTTGGCTTCG
CCGAGGGATTTCCTTTCCCCGACAGCATGGTTTGAGCAGGAGCACCACCCTGGATACACA
ATAGTGCACAAGTATGGTGGCGAGCTGTTCAGCGCCACGCAGGATTTCTCTCCATTCAAC
GTGGTCGCGTGGCATGGGAATTATGTCCCTTACAAGTATGATCTGAGTAAGTTCTGTCCA
TTCAACACCGTCCTCTTGGATCATGGCGACCCGTCAGTGAACACAGTTCTAACTGCGCCA
ACTGATAAGCCTGGCGTCGCGTTGCTTGATTTTGTAATATTCCCACCCAGATGGCTGGTT
GCTGAGAATACATTCCGCCCACCCTACTACCACCGCAACTGCATGAGCGAATTCATGGGC
CTCATCTATGGGATGTACGAGGTATCTATCTATCTATCTATCTATCTATCTATCTTATCT
ATCTATCTCTCTGGCAGTGGCAGCAGTCATGTGAAGAGATGTAAAGACGATGCACATCTG
CAGGCTAAGGCCGATGGTTTTCTTCCTGGTGGCGCCAGCCTTCACAGCTGCATGACACCG
CATGGGCCAGACACCAAGACGTACGAGGCAACGATCAGCCGTGCTGCTGCCAACGAGCCA
TCCAGGCTCAGTGGTACGTTGGCGTTCATGTTTGAGTCTTGGCTTATCCCTCGCGTGTGC
CCATGGGCTCTGGATTCCCCGTGTCGGGACCTCGACTACTACCAGTGCTGGATCGGATTG
AAGTCACACTTTTCACCTCCTGCTGCTGCTGTTGATGATGAGAACGAGTAG

Peptide Sequence

PEP ID

Zm00001d045610_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:28669387:28671873:1 gene:Zm00001d045610 transcript:Zm00001d045610_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homogentisate 12-dioxygenase
Sequence

MAMEEEQTPPELRYLSGLGNTSFTTPRARNLRTWLYRIKPSVTHEPFYPRNPTNERLVGE
FDRTTTVATPTQLRWRPADVPLHPGLDFIDGLYTVCGAGSSCLRHGYAIHMYAANKPMDG
CSLCNADGDFLIVPQQGRLFITTECGRLLVSPGEIVVIPQGLRFAVDLPDGPSRGYVSEI
FGAHFQLPDLGPIGANGLASPRDFLSPTAWFEQEHHPGYTIVHKYGGELFSATQDFSPFN
VVAWHGNYVPYKYDLSKFCPFNTVLLDHGDPSVNTVLTAPTDKPGVALLDFVIFPPRWLV
AENTFRPPYYHRNCMSEFMGLIYGMYEVSIYLSIYLSILSIYLSGSGSSHVKRCKDDAHL
QAKADGFLPGGASLHSCMTPHGPDTKTYEATISRAAANEPSRLSGTLAFMFESWLIPRVC
PWALDSPCRDLDYYQCWIGLKSHFSPPAAAVDDENE

Transcript Sequence

Transcript ID

Zm00001d045610_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:28669387:28671873:1 gene:Zm00001d045610 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homogentisate 12-dioxygenase
Sequence

CTGCTGGTCTCGCCGTTGCCGGCTTGCCCCGTCCGTGCGTCCATCTGTTTCCTCCTTGGA
TCCTCGACAAGCAATGGCCATGGAGGAGGAGCAGACACCACCCGAGCTGCGCTACCTCTC
GGGCCTGGGCAACACCTCCTTCACCACCCCGCGCGCCCGGAACCTGCGCACGTGGCTGTA
CCGGATCAAGCCGTCGGTGACCCACGAACCCTTCTATCCGCGGAACCCCACCAACGAGCG
CCTCGTCGGCGAGTTCGACCGCACCACCACCGTCGCCACGCCCACGCAGCTGCGCTGGAG
GCCCGCCGACGTGCCCCTCCACCCGGGCCTCGACTTCATCGACGGACTCTACACCGTCTG
CGGCGCCGGCAGCTCATGCCTCCGACACGGATACGCCATCCACATGTATGCTGCTAACAA
GCCCATGGATGGATGCTCCTTGTGCAATGCGGACGGTGACTTCCTCATTGTTCCCCAGCA
AGGAAGGTTATTTATCACAACCGAGTGCGGAAGGCTGCTGGTTTCACCCGGCGAGATCGT
CGTGATCCCTCAAGGTCTCCGATTTGCTGTCGACTTGCCGGATGGCCCCTCGCGTGGCTA
TGTCTCTGAGATCTTCGGCGCCCATTTTCAGCTCCCTGATCTTGGCCCAATTGGTGCCAA
TGGCTTGGCTTCGCCGAGGGATTTCCTTTCCCCGACAGCATGGTTTGAGCAGGAGCACCA
CCCTGGATACACAATAGTGCACAAGTATGGTGGCGAGCTGTTCAGCGCCACGCAGGATTT
CTCTCCATTCAACGTGGTCGCGTGGCATGGGAATTATGTCCCTTACAAGTATGATCTGAG
TAAGTTCTGTCCATTCAACACCGTCCTCTTGGATCATGGCGACCCGTCAGTGAACACAGT
TCTAACTGCGCCAACTGATAAGCCTGGCGTCGCGTTGCTTGATTTTGTAATATTCCCACC
CAGATGGCTGGTTGCTGAGAATACATTCCGCCCACCCTACTACCACCGCAACTGCATGAG
CGAATTCATGGGCCTCATCTATGGGATGTACGAGGTATCTATCTATCTATCTATCTATCT
ATCTATCTTATCTATCTATCTCTCTGGCAGTGGCAGCAGTCATGTGAAGAGATGTAAAGA
CGATGCACATCTGCAGGCTAAGGCCGATGGTTTTCTTCCTGGTGGCGCCAGCCTTCACAG
CTGCATGACACCGCATGGGCCAGACACCAAGACGTACGAGGCAACGATCAGCCGTGCTGC
TGCCAACGAGCCATCCAGGCTCAGTGGTACGTTGGCGTTCATGTTTGAGTCTTGGCTTAT
CCCTCGCGTGTGCCCATGGGCTCTGGATTCCCCGTGTCGGGACCTCGACTACTACCAGTG
CTGGATCGGATTGAAGTCACACTTTTCACCTCCTGCTGCTGCTGTTGATGATGAGAACGA
GTAGCTGCTTACAGCAGCAGTCTTGGAACGGACAGGCAGCGAACTGAAACTGGGGTGGAT
ATGCTGTACGTCGTGTCCTGCTTGCTGTCGGTTTCTGAAGCTTTTAGCTGGCAGGGACAG
GCGGCTGTTGGCTTTGCTGATTGCCCAACCCTCTCCTGTAATATTAATCCTACCAGAGAA
ACTTAAACTTGACTCAACCGATATGCTATTAAATAAATAAAGCAAGCAAGTTAGGATACG
AG