Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045606_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:9:28565556:28569858:-1 gene:Zm00001d045606 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxisomal acyl-coenzyme A oxidase 1
Sequence	ATGGCGCGCCTCGTCGCATCCGACCCTGTCTTCCGCAAGGATAACAGGACCATGCTCTCC AGGAAGGAGTTGTTCAAGGACACTCTAAGAAAAGCAGCGCATGCGTGGAAGCGGATTGTC GAGCTACGTCTTACAGAAGAGGAAGCGGATTTGCTGAGACAATATGTTGACCAGCCTGGT TATGTTGATCTGCATTGGGGCATGTTCGTTCCAGCTATAAAAGGCCAAGGAACTGAGGAG CAGCAGCACAAGTGGTTACCACTGGCTTACAAGTTCCAAATAATTGGGTGCTATGCTCAG ACGGAACTTGGTCATGGCTCAAACGTTCAGGGCCTTGAAACAACTGCTACATTCGATCCG AAGACTGATGAGTTTGTCATCCACAGTCCAACTCTCACGTCCAGCAAATGGTGGCCTGGT GGCTTGGGGAAAGCTTCCACCCATGCAGTGGTGTACGCTCGGTTGATAACTGAAGGAAAG GACTATGGCATACATGGTTTCATTGTGCAACTGCGAAGCTTAGAGGATCACTCCCCACTT CCTGGTGTTACCCTCGGTGATATTGGTGGAAAGTTCGGTAGTGGTGCATATAACAGTATG GATAATGGTGTTCTTCGATTTGACCATGTGCGCATCCCAAGGGATCAAATGTTGATGAGG CTTTCACAAGTTACAAGGGAGGGGAAATATGTTCACTCAAATGTTCCAAAGCAGCTGTTG TATGGGACAATGGTTTACGTTCGCCAGTCAATTGTTGCAGATGCTTCTAAGGCTTTGTCC CGTGCTGTTTGCATTGCTGTACGATACAGCGCAGTCAGAAAGCAGTTTGGCTCTCAAGAT GGTGGCCCTGAGACTCAGGTCCTTAATTACAAGACTCAACAGAGCAGACTCTTTCCATTG CTGGCTTCAGCATATGCATTTAGATTTGTGGGTGATTGGCTCAACTGGCTATATACGGAT GTAACTCAGAAACTGGAAGCCAAGGACTTCTCGACCCTGCAGGAAGCTCATGCATGCACT GCTGGTTTGAAAGCTGTGACAACATCAGTAACAGCTGATGCAATTGAAGAATGCCGAAAG CTCTGTGGTGGACATGGTTACTTGAACAGCAGTGGGCTTCCTGAGTTGTTTGCGGTCTAT GTTCCCGCTTGCACTTACGAAGGAGACAACGTCGTTTTGCTTTTGCAGGTTGCAAGGATT CTAATGAAAACCGTTTCTCAGTTGGCATCCGGGAAACAGCCTGTTGGCACAATGGCCTAC ATGGGCAAAGTGCAGTATTTGATGCAATGCAAATCTGCTGTCAGTTCAGCTGAAGATTGG CTTAACCCTGATGCCATACAAGAGGCATTTGAAGCAAGAGCGCTCAGAATGGCGGTAAAC TGTGCCCAGAACATAAGCCAAGCTGCAAGCCAAGAGGAAGGTTTCTATGAGCGGTCCCCA GATTTGCTTGAGGCTGCGGTAGCTCACATCCAGCTGATTATCGTGACCAAGTTCATTGAG AAGGTGCATCAGGAGATTCCTGGACACGGAGTGAAGGAACAGCTCCAGGCCCTCTGCAAC GTGTACGCGCTGTACATCCTCCACAAGCACCTGGGCGACTTCTTGGCGACTGGGTGCATC ACGCCCAGGCAGGGAGCGCTGGCAAACGAGCAGCTGGGCAAGCTGTACGCGCAGGTGCGT CCGAACGCTGTGGCGCTGGTGGATGCGTTCAACTACACGGACCACTACCTGGGGTCTGTG CTGGGGCGGTACGACGGCGACGTGTACCCTGCGCTCTACGAGGAGGCGTGGAAGGACCCG CTGAACGAGACGGTGGTGCCGGAGGGGTACCACGAGTACCTCCGCCCACTCATCAAGCAG CAGCAGCTCAAGCTCTCGAGGCTCTGA

Peptide Sequence

PEP ID	Zm00001d045606_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:9:28565556:28569858:-1 gene:Zm00001d045606 transcript:Zm00001d045606_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxisomal acyl-coenzyme A oxidase 1
Sequence	MARLVASDPVFRKDNRTMLSRKELFKDTLRKAAHAWKRIVELRLTEEEADLLRQYVDQPG YVDLHWGMFVPAIKGQGTEEQQHKWLPLAYKFQIIGCYAQTELGHGSNVQGLETTATFDP KTDEFVIHSPTLTSSKWWPGGLGKASTHAVVYARLITEGKDYGIHGFIVQLRSLEDHSPL PGVTLGDIGGKFGSGAYNSMDNGVLRFDHVRIPRDQMLMRLSQVTREGKYVHSNVPKQLL YGTMVYVRQSIVADASKALSRAVCIAVRYSAVRKQFGSQDGGPETQVLNYKTQQSRLFPL LASAYAFRFVGDWLNWLYTDVTQKLEAKDFSTLQEAHACTAGLKAVTTSVTADAIEECRK LCGGHGYLNSSGLPELFAVYVPACTYEGDNVVLLLQVARILMKTVSQLASGKQPVGTMAY MGKVQYLMQCKSAVSSAEDWLNPDAIQEAFEARALRMAVNCAQNISQAASQEEGFYERSP DLLEAAVAHIQLIIVTKFIEKVHQEIPGHGVKEQLQALCNVYALYILHKHLGDFLATGCI TPRQGALANEQLGKLYAQVRPNAVALVDAFNYTDHYLGSVLGRYDGDVYPALYEEAWKDP LNETVVPEGYHEYLRPLIKQQQLKLSRL

Transcript Sequence

Transcript ID	Zm00001d045606_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:28565556:28569858:-1 gene:Zm00001d045606 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxisomal acyl-coenzyme A oxidase 1
Sequence	CGTCCACGTCGCCGACCGCATGGCGCGCCTCGTCGCATCCGACCCTGTCTTCCGCAAGGA TAACAGGACCATGCTCTCCAGGAAGGAGTTGTTCAAGGACACTCTAAGAAAAGCAGCGCA TGCGTGGAAGCGGATTGTCGAGCTACGTCTTACAGAAGAGGAAGCGGATTTGCTGAGACA ATATGTTGACCAGCCTGGTTATGTTGATCTGCATTGGGGCATGTTCGTTCCAGCTATAAA AGGCCAAGGAACTGAGGAGCAGCAGCACAAGTGGTTACCACTGGCTTACAAGTTCCAAAT AATTGGGTGCTATGCTCAGACGGAACTTGGTCATGGCTCAAACGTTCAGGGCCTTGAAAC AACTGCTACATTCGATCCGAAGACTGATGAGTTTGTCATCCACAGTCCAACTCTCACGTC CAGCAAATGGTGGCCTGGTGGCTTGGGGAAAGCTTCCACCCATGCAGTGGTGTACGCTCG GTTGATAACTGAAGGAAAGGACTATGGCATACATGGTTTCATTGTGCAACTGCGAAGCTT AGAGGATCACTCCCCACTTCCTGGTGTTACCCTCGGTGATATTGGTGGAAAGTTCGGTAG TGGTGCATATAACAGTATGGATAATGGTGTTCTTCGATTTGACCATGTGCGCATCCCAAG GGATCAAATGTTGATGAGGCTTTCACAAGTTACAAGGGAGGGGAAATATGTTCACTCAAA TGTTCCAAAGCAGCTGTTGTATGGGACAATGGTTTACGTTCGCCAGTCAATTGTTGCAGA TGCTTCTAAGGCTTTGTCCCGTGCTGTTTGCATTGCTGTACGATACAGCGCAGTCAGAAA GCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTCAGGTCCTTAATTACAAGACTCAACA GAGCAGACTCTTTCCATTGCTGGCTTCAGCATATGCATTTAGATTTGTGGGTGATTGGCT CAACTGGCTATATACGGATGTAACTCAGAAACTGGAAGCCAAGGACTTCTCGACCCTGCA GGAAGCTCATGCATGCACTGCTGGTTTGAAAGCTGTGACAACATCAGTAACAGCTGATGC AATTGAAGAATGCCGAAAGCTCTGTGGTGGACATGGTTACTTGAACAGCAGTGGGCTTCC TGAGTTGTTTGCGGTCTATGTTCCCGCTTGCACTTACGAAGGAGACAACGTCGTTTTGCT TTTGCAGGTTGCAAGGATTCTAATGAAAACCGTTTCTCAGTTGGCATCCGGGAAACAGCC TGTTGGCACAATGGCCTACATGGGCAAAGTGCAGTATTTGATGCAATGCAAATCTGCTGT CAGTTCAGCTGAAGATTGGCTTAACCCTGATGCCATACAAGAGGCATTTGAAGCAAGAGC GCTCAGAATGGCGGTAAACTGTGCCCAGAACATAAGCCAAGCTGCAAGCCAAGAGGAAGG TTTCTATGAGCGGTCCCCAGATTTGCTTGAGGCTGCGGTAGCTCACATCCAGCTGATTAT CGTGACCAAGTTCATTGAGAAGGTGCATCAGGAGATTCCTGGACACGGAGTGAAGGAACA GCTCCAGGCCCTCTGCAACGTGTACGCGCTGTACATCCTCCACAAGCACCTGGGCGACTT CTTGGCGACTGGGTGCATCACGCCCAGGCAGGGAGCGCTGGCAAACGAGCAGCTGGGCAA GCTGTACGCGCAGGTGCGTCCGAACGCTGTGGCGCTGGTGGATGCGTTCAACTACACGGA CCACTACCTGGGGTCTGTGCTGGGGCGGTACGACGGCGACGTGTACCCTGCGCTCTACGA GGAGGCGTGGAAGGACCCGCTGAACGAGACGGTGGTGCCGGAGGGGTACCACGAGTACCT CCGCCCACTCATCAAGCAGCAGCAGCTCAAGCTCTCGAGGCTCTGAAGTCTGAATCCTCT CTCTCTCT