Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045597_T051
CDS Infomation	cds chromosome:B73_RefGen_v4:9:28032851:28046964:-1 gene:Zm00001d045597 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GTPase activation protein (RhoGAP) with PH domain
Sequence	ATGTCAGCTTCCGAGTTCAGAATTCCATACCAGCAAGTTTCTTCTTCACAGCCTGTTGAG AATGTGAATCAGTTTAAGACCTGTCGATGTGGGGAGGGAGACCCAAACTCCACATCTGAA ACTGGTGACAGCCCGCCGGCCTCTTGTCCTAATTGTCAGGTCCTTAAGAGTGGACATTTA CTACTTTCATCTAAAGGAATTGGATGGACATCATGGAAAAAGCGCTGGTTTATTCTTACA AGGGCATCCCTAGTTTTCTTCAGAAGTGACCCTAATGTACCTCCACCCAGAGGAGCTGAA CCGATTGTTACACTTGGTGGAATCGACTTGAATAGCTCTGGAAGCGTTGCCGTCAAAGAA GAAAGGAAACTTTTGACAGTGTTCTTTCCTGATGGTCGTGATGGACGAACTTTCACTCTG AAGGCAGAAACTACAGAAGACCTAAATGAGTGGAGAAATGCACTGGAGAGTGCTTTAGCA CAGGCACCCAGCGTAGCAAATACAATGGGGCAAAATCCAATATTCAGCACTGATGTAGCA GCAGAACCTGCTGAAGCTCCAGCTGAACAGTCGGAGGACAGTTCTGTTATTGGCAGACCT GCAGAATTTGCACTTGTAGATGCTGATGGTAGTCCATCATTTCTGGAGAAGGCCCTGAAG TTCATTGAAGATCATGGGGTAAAGGTAGAGGGCATCCTGCGTCAGTCTGCTGATGTTGAA GAAGTCAAACGCAGAATTCAGGATTATGAAAAGGGGAAAAACGAGTTCTCTCCAGAAGAG GATGCTCATGTTATTGGTGACTGTATTAAGTATGTTCTTAGAGAGATGCCATCATCTCCA GTTCCTGCATCATGTTGCACTGCCCTGGTTAAAGCATACCGAAGTGACAAGGCAAGAAGA CTTGATGAGATAAGTAGGGTGATATATGAAGTTTTCCCTGAACCAAATCGACAATTGTTG CAGAGGACTCTTAAGATGATGCAAATTGTTGAGTCACACAAAGCTGTGAATAGGATGTCT CAATCTGCTTTGGCAGCTTGCATGGCACCACTTCTTCTCCGACCTCTTCTTCTTGGAGAA TGTGACATAGACAATGAATTTAGTATGGGAGGGGACAGTTCATTTCAGCTACTTCAAGCT GCTGCGGCTGCGAATCATGCACAAGCTATTGTTATTATTATGATGGAGGAATTTGATCAG ATATTTGATGACTTGGAAGAAGGTTCCTGTTCTTCAGATGCTTATACCGAGTCTGAGGAT GATGATGTTGATAAGGAATATTCCACAGATAATGACATTAATGATGATGATGACGGTTCT TATGATTCTGGTGAAGATGACATTGAAGAAGACTTGGACTACTCTGATGACAGTGAACAT GACAGTAAGATCAACACTAATGTCAAGGATGGCAAGGTTAAAAACAATATCTCAGAAACT GCAGAAGTTGCACAGGCAAAGGGTGCTTCTCATATGGAGACCAATAGTCAATCCAACCAG AAACAAGAATCATGTGGACCAAATGGATCCAAAGATCGTATACTAAGATCAACTTCTCGT TCATCATCCTCCAGAGAAAAATCTATGGAGAAATCATGCAGTTCGGCACACAGGGGAAAA AGAACCTTATGGGGCCGTACTTCAGCAAGAAAAGACCTGTCAACAGAGGAGATTGAATGC TGCAGTGATGATGAGTCCCTTATTGAGAAACTTGAGAGCAACAAGGTTGATCTCCAATCG AAAATTGCAAAGGAGGCCAAAGAAAATGCTATTCTACAGTCAAGTCTAGAAAAGCGGAAA GAAGAACTACATGAGCGCCGTTTAGCACTTGAAAAGGAAGTTGAAAATTTGAGGGAGCAG CTGCAGAAGGAGAGAAGTTTGAGGACATCCTTGGAGTCCGGGGTGATGAATTTGCGAAGA GGGCAGGTGTCCTTGCCGTCAACAACAGACAGCAAGACTAAGGCTGATCTTGAGGAGGTT GCAACTGCTGAATCTGATATTATAAACTTGAAGCAAGAGGTTTCTGATCTTCGTGGGCAG GTCAGTGGCCAG

Peptide Sequence

PEP ID	Zm00001d045597_P051
PEP Infomation	pep chromosome:B73_RefGen_v4:9:28032851:28046964:-1 gene:Zm00001d045597 transcript:Zm00001d045597_T051 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GTPase activation protein (RhoGAP) with PH domain
Sequence	MSASEFRIPYQQVSSSQPVENVNQFKTCRCGEGDPNSTSETGDSPPASCPNCQVLKSGHL LLSSKGIGWTSWKKRWFILTRASLVFFRSDPNVPPPRGAEPIVTLGGIDLNSSGSVAVKE ERKLLTVFFPDGRDGRTFTLKAETTEDLNEWRNALESALAQAPSVANTMGQNPIFSTDVA AEPAEAPAEQSEDSSVIGRPAEFALVDADGSPSFLEKALKFIEDHGVKVEGILRQSADVE EVKRRIQDYEKGKNEFSPEEDAHVIGDCIKYVLREMPSSPVPASCCTALVKAYRSDKARR LDEISRVIYEVFPEPNRQLLQRTLKMMQIVESHKAVNRMSQSALAACMAPLLLRPLLLGE CDIDNEFSMGGDSSFQLLQAAAAANHAQAIVIIMMEEFDQIFDDLEEGSCSSDAYTESED DDVDKEYSTDNDINDDDDGSYDSGEDDIEEDLDYSDDSEHDSKINTNVKDGKVKNNISET AEVAQAKGASHMETNSQSNQKQESCGPNGSKDRILRSTSRSSSSREKSMEKSCSSAHRGK RTLWGRTSARKDLSTEEIECCSDDESLIEKLESNKVDLQSKIAKEAKENAILQSSLEKRK EELHERRLALEKEVENLREQLQKERSLRTSLESGVMNLRRGQVSLPSTTDSKTKADLEEV ATAESDIINLKQEVSDLRGQVSGQ

Transcript Sequence

Transcript ID	Zm00001d045597_T051
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:28032851:28046964:-1 gene:Zm00001d045597 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GTPase activation protein (RhoGAP) with PH domain
Sequence	GGAGGAGAGGCGGCTCTTGCAGCTGTCGGGCCGGGGAACAACATCGGAGGGGCTAGTCAT GGTCTTGGCTAGGGGATTTCTGATCGCCTCCTCTCCTCTCCTGCCCCGCCGTGCCGCAAG CCGCAATGCAACTATGAAATCTGAGCTCGCCGCTTCCCTCCGCCATTCACGTCGGTGACA TTTATTCATTTCCTTCATTCAGGATCGTCTCTGTCTGAAAGCACAGCAAGTTGGTATTTG GATCAGGACTCGTAGGGAGCAAAAACGGCAGCGCATTGCCAGGACAGAGGTCATCCTGAA GTTCTCCTTAAGTCGGACACTTAGACCAGGCTGACGATGTCAGCTTCCGAGTTCAGAATT CCATACCAGCAAGTTTCTTCTTCACAGCCTGTTGAGAATGTGAATCAGTTTAAGACCTGT CGATGTGGGGAGGGAGACCCAAACTCCACATCTGAAACTGGTGACAGCCCGCCGGCCTCT TGTCCTAATTGTCAGGTCCTTAAGAGTGGACATTTACTACTTTCATCTAAAGGAATTGGA TGGACATCATGGAAAAAGCGCTGGTTTATTCTTACAAGGGCATCCCTAGTTTTCTTCAGA AGTGACCCTAATGTACCTCCACCCAGAGGAGCTGAACCGATTGTTACACTTGGTGGAATC GACTTGAATAGCTCTGGAAGCGTTGCCGTCAAAGAAGAAAGGAAACTTTTGACAGTGTTC TTTCCTGATGGTCGTGATGGACGAACTTTCACTCTGAAGGCAGAAACTACAGAAGACCTA AATGAGTGGAGAAATGCACTGGAGAGTGCTTTAGCACAGGCACCCAGCGTAGCAAATACA ATGGGGCAAAATCCAATATTCAGCACTGATGTAGCAGCAGAACCTGCTGAAGCTCCAGCT GAACAGTCGGAGGACAGTTCTGTTATTGGCAGACCTGCAGAATTTGCACTTGTAGATGCT GATGGTAGTCCATCATTTCTGGAGAAGGCCCTGAAGTTCATTGAAGATCATGGGGTAAAG GTAGAGGGCATCCTGCGTCAGTCTGCTGATGTTGAAGAAGTCAAACGCAGAATTCAGGAT TATGAAAAGGGGAAAAACGAGTTCTCTCCAGAAGAGGATGCTCATGTTATTGGTGACTGT ATTAAGTATGTTCTTAGAGAGATGCCATCATCTCCAGTTCCTGCATCATGTTGCACTGCC CTGGTTAAAGCATACCGAAGTGACAAGGCAAGAAGACTTGATGAGATAAGTAGGGTGATA TATGAAGTTTTCCCTGAACCAAATCGACAATTGTTGCAGAGGACTCTTAAGATGATGCAA ATTGTTGAGTCACACAAAGCTGTGAATAGGATGTCTCAATCTGCTTTGGCAGCTTGCATG GCACCACTTCTTCTCCGACCTCTTCTTCTTGGAGAATGTGACATAGACAATGAATTTAGT ATGGGAGGGGACAGTTCATTTCAGCTACTTCAAGCTGCTGCGGCTGCGAATCATGCACAA GCTATTGTTATTATTATGATGGAGGAATTTGATCAGATATTTGATGACTTGGAAGAAGGT TCCTGTTCTTCAGATGCTTATACCGAGTCTGAGGATGATGATGTTGATAAGGAATATTCC ACAGATAATGACATTAATGATGATGATGACGGTTCTTATGATTCTGGTGAAGATGACATT GAAGAAGACTTGGACTACTCTGATGACAGTGAACATGACAGTAAGATCAACACTAATGTC AAGGATGGCAAGGTTAAAAACAATATCTCAGAAACTGCAGAAGTTGCACAGGCAAAGGGT GCTTCTCATATGGAGACCAATAGTCAATCCAACCAGAAACAAGAATCATGTGGACCAAAT GGATCCAAAGATCGTATACTAAGATCAACTTCTCGTTCATCATCCTCCAGAGAAAAATCT ATGGAGAAATCATGCAGTTCGGCACACAGGGGAAAAAGAACCTTATGGGGCCGTACTTCA GCAAGAAAAGACCTGTCAACAGAGGAGATTGAATGCTGCAGTGATGATGAGTCCCTTATT GAGAAACTTGAGAGCAACAAGGTTGATCTCCAATCGAAAATTGCAAAGGAGGCCAAAGAA AATGCTATTCTACAGTCAAGTCTAGAAAAGCGGAAAGAAGAACTACATGAGCGCCGTTTA GCACTTGAAAAGGAAGTTGAAAATTTGAGGGAGCAGCTGCAGAAGGAGAGAAGTTTGAGG ACATCCTTGGAGTCCGGGGTGATGAATTTGCGAAGAGGGCAGGTGTCCTTGCCGTCAACA ACAGACAGCAAGACTAAGGCTGATCTTGAGGAGGTTGCAACTGCTGAATCTGATATTATA AACTTGAAGCAAGAGGTTTCTGATCTTCGTGGGCAGGTCAGTGGCCAGC