Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045597_T049
CDS Infomation	cds chromosome:B73_RefGen_v4:9:28031895:28047074:-1 gene:Zm00001d045597 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GTPase activation protein (RhoGAP) with PH domain
Sequence	ATGTCAGCTTCCGAGTTCAGAATTCCATACCAGCAAGTTTCTTCTTCACAGCCTGTTGAG AATGTGAATCAGTTTAAGACCTGTCGATGTGGGGAGGGAGACCCAAACTCCACATCTGAA ACTGGTGACAGCCCGCCGGCCTCTTGTCCTAATTGTCAGGTCCTTAAGAGTGGACATTTA CTACTTTCATCTAAAGGAATTGGATGGACATCATGGAAAAAGCGCTGGTTTATTCTTACA AGGGCATCCCTAGTTTTCTTCAGAAGTGACCCTAATGTACCTCCACCCAGAGGAGCTGAA CCGATTGTTACACTTGGTGGAATCGACTTGAATAGCTCTGGAAGCGTTGCCGTCAAAGAA GAAAGGAAACTTTTGACAGTGTTCTTTCCTGATGGTCGTGATGGACGAACTTTCACTCTG AAGGCAGAAACTACAGAAGACCTAAATGAGTGGAGAAATGCACTGGAGAGTGCTTTAGCA CAGGCACCCAGCGTAGCAAATACAATGGGGCAAAATCCAATATTCAGCACTGATGTAGCA GCAGAACCTGCTGAAGCTCCAGCTGAACAGTCGGAGGACAGTTCTGTTATTGGCAGACCT GCAGAATTTGCACTTGTAGATGCTGATGGTAGTCCATCATTTCTGGAGAAGGCCCTGAAG TTCATTGAAGATCATGGGGTAAAGGTAGAGGGCATCCTGCGTCAGTCTGCTGATGTTGAA GAAGTCAAACGCAGAATTCAGGATTATGAAAAGGGGAAAAACGAGTTCTCTCCAGAAGAG GATGCTCATGTTATTGGTGACTGTATTAAGTATGTTCTTAGAGAGATGCCATCATCTCCA GTTCCTGCATCATGTTGCACTGCCCTGGTTAAAGCATACCGAAGTGACAAGGCAAGAAGA CTTGATGAGATAAGTAGGGTGATATATGAAGTTTTCCCTGAACCAAATCGACAATTGTTG CAGAGGACTTGGAAGAAGGTTCCTGTTCTTCAGATGCTTATACCGAGTCTGAGGATGATG ATGTTGATAAGGAATATTCCACAGATAATGACATTAATGATGATGATGACGGTTCTTATG ATTCTGGTGAAGATGACATTGAAGAAGACTTGGACTACTCTGATGACAGTGAACATGACA GTAAGATCAACACTAATGTCAAGGATGGCAAGGTTAAAAACAATATCTCAGAAACTGCAG AAGTTGCACAGGCAAAGGGTGCTTCTCATATGGAGACCAATAGTCAATCCAACCAGAAAC AAGAATCATGTGGACCAAATGGATCCAAAGATCGTATACTAA

Peptide Sequence

PEP ID	Zm00001d045597_P049
PEP Infomation	pep chromosome:B73_RefGen_v4:9:28031895:28047074:-1 gene:Zm00001d045597 transcript:Zm00001d045597_T049 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GTPase activation protein (RhoGAP) with PH domain
Sequence	MSASEFRIPYQQVSSSQPVENVNQFKTCRCGEGDPNSTSETGDSPPASCPNCQVLKSGHL LLSSKGIGWTSWKKRWFILTRASLVFFRSDPNVPPPRGAEPIVTLGGIDLNSSGSVAVKE ERKLLTVFFPDGRDGRTFTLKAETTEDLNEWRNALESALAQAPSVANTMGQNPIFSTDVA AEPAEAPAEQSEDSSVIGRPAEFALVDADGSPSFLEKALKFIEDHGVKVEGILRQSADVE EVKRRIQDYEKGKNEFSPEEDAHVIGDCIKYVLREMPSSPVPASCCTALVKAYRSDKARR LDEISRVIYEVFPEPNRQLLQRTWKKVPVLQMLIPSLRMMMLIRNIPQIMTLMMMMTVLM ILVKMTLKKTWTTLMTVNMTVRSTLMSRMARLKTISQKLQKLHRQRVLLIWRPIVNPTRN KNHVDQMDPKIVY

Transcript Sequence

Transcript ID	Zm00001d045597_T049
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:28031895:28047074:-1 gene:Zm00001d045597 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GTPase activation protein (RhoGAP) with PH domain
Sequence	ATTGCCAAGAATAGAACGTACTCCAATCGTATCCATAGGGAGCTCAACCAACCAACCATC CATCCATGGATTGGTGCCACAAACAACAAGACCGGCCAAGAGGGAAGAGCGGAGGAGAGG CGGCTCTTGCAGCTGTCGGGGGCTAGTCATGGTCTTGGCTAGGGGATTTCTGATCGCCTC CTCTCCTCTCCTGCCCCGCCGTGCCGCAAGCCGCAATGCAACTATGAAATCTGAGCTCGC CGCTTCCCTCCGCCATTCACGTCGGTGACATTTATTCATTTCCTTCATTCAGATCATGGA TCGACAGTCCATGCCCTTCACACAATCAAAATCGAATCTTGGTTGCACAACTGGAATAAC GCACATCGTTTTCCCCCCTCAACATAGGATCGTCTCTGTCTGAAAGCACAGCAATAGGGA GCAAAAACGGCAGCGCATTGCCAGGACAGAGGTCATCCTGAAGTTCTCCTTAAGTCGGAC ACTTAGACCAGGCTGACGATGTCAGCTTCCGAGTTCAGAATTCCATACCAGCAAGTTTCT TCTTCACAGCCTGTTGAGAATGTGAATCAGTTTAAGACCTGTCGATGTGGGGAGGGAGAC CCAAACTCCACATCTGAAACTGGTGACAGCCCGCCGGCCTCTTGTCCTAATTGTCAGGTC CTTAAGAGTGGACATTTACTACTTTCATCTAAAGGAATTGGATGGACATCATGGAAAAAG CGCTGGTTTATTCTTACAAGGGCATCCCTAGTTTTCTTCAGAAGTGACCCTAATGTACCT CCACCCAGAGGAGCTGAACCGATTGTTACACTTGGTGGAATCGACTTGAATAGCTCTGGA AGCGTTGCCGTCAAAGAAGAAAGGAAACTTTTGACAGTGTTCTTTCCTGATGGTCGTGAT GGACGAACTTTCACTCTGAAGGCAGAAACTACAGAAGACCTAAATGAGTGGAGAAATGCA CTGGAGAGTGCTTTAGCACAGGCACCCAGCGTAGCAAATACAATGGGGCAAAATCCAATA TTCAGCACTGATGTAGCAGCAGAACCTGCTGAAGCTCCAGCTGAACAGTCGGAGGACAGT TCTGTTATTGGCAGACCTGCAGAATTTGCACTTGTAGATGCTGATGGTAGTCCATCATTT CTGGAGAAGGCCCTGAAGTTCATTGAAGATCATGGGGTAAAGGTAGAGGGCATCCTGCGT CAGTCTGCTGATGTTGAAGAAGTCAAACGCAGAATTCAGGATTATGAAAAGGGGAAAAAC GAGTTCTCTCCAGAAGAGGATGCTCATGTTATTGGTGACTGTATTAAGTATGTTCTTAGA GAGATGCCATCATCTCCAGTTCCTGCATCATGTTGCACTGCCCTGGTTAAAGCATACCGA AGTGACAAGGCAAGAAGACTTGATGAGATAAGTAGGGTGATATATGAAGTTTTCCCTGAA CCAAATCGACAATTGTTGCAGAGGACTTGGAAGAAGGTTCCTGTTCTTCAGATGCTTATA CCGAGTCTGAGGATGATGATGTTGATAAGGAATATTCCACAGATAATGACATTAATGATG ATGATGACGGTTCTTATGATTCTGGTGAAGATGACATTGAAGAAGACTTGGACTACTCTG ATGACAGTGAACATGACAGTAAGATCAACACTAATGTCAAGGATGGCAAGGTTAAAAACA ATATCTCAGAAACTGCAGAAGTTGCACAGGCAAAGGGTGCTTCTCATATGGAGACCAATA GTCAATCCAACCAGAAACAAGAATCATGTGGACCAAATGGATCCAAAGATCGTATACTAA GATCAACTTCTCGTTCATCATCCTCCAGAGAAAAATCTATGGAGAAATCATGCAGTTCGG CACACAGGGGAAAAAGAACCTTATGGGGCCGTACTTCAGCAAGAAAAGACCTGTCAACAG AGGAGATTGAATGCTGCAGTGATGATGAGTCCCTTATTGAGAAACTTGAGAGCAACAAGG TTGATCTCCAATCGAAAATTGCAAAGGAGGCCAAAGAAAATGCTATTCTACAGTCAAGTC TAGAAAAGCGGAAAGAAGAACTACATGAGCGCCGTTTAGCACTTGAAAAGGAAGTTGAAA ATTTGAGGGAGCAGCTGCAGAAGGGTGATGAATTTGCGAAGAGGGCAGGTGTCCTTGCCG TCAACAACAGACAGCAAGGTCAGTGGCCAGCAGCTGTGCTGTGAATCATGCAACAAAAGG CTCCTAAACACAGACAGGCTTGGCGGACCTGAAAGCTCATCAGTGGCAGCGTCACCGACC ATTGGGAGTGACTCTGCATCTGGCATGGGTGATATCGAGCAATCAAGGAAGCAGACGGCA CAGGATTCGCCTTCTTCGACAGACAAGCCAGGTCACGAGGCGGTCGGGGGCAGCAGCCAG AGGGCTCCTCAAAGAAGGCAATCGATTGCCAGGGAGGGCCAAGATGGGTGGTCGTCATCA TCCTCTAATTCGAAGTGGAATCTTGCTCAGAAACAATATTCAAATAGCCCATTGATAAGA GGGCTTCATGGATCCAGCAGACTAGAGGATTTCGGTGGAAGCATACCACCAGCAGCGTCA TCGGCATTAGTCAAGCTGACAAACCGGCTCAACTTCCTGAAAGAACGGAGGGCGCTGCTG GCAAGCGAGATGCAGAGCTTGGATCTGGGTCGGCCCCCAGCAGCAGTCCCCAACACCAAA AGGCCATGAAAGGAAGAAGAGTCGAGACTGAGGAAGATGTTGTGCTCTTCTGAATGCTAG TTAGCCTTATGATTACCAGCAGTGTAGTTTGTGTGCATCCCATTCCCTTCCATAGTGCTG TCTGTCTGTACATGTTTCCACAAATTCTACTGCGGATACATAATATAGATACGGCTGGA