Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045589_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:27423699:27425201:-1 gene:Zm00001d045589 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 32 description:Scarecrow-like protein 6
Sequence	ATGTCTGAGCTCCCGGACGGCGGCGCCGGCGGAAATGGCCAAGACGAAGCCGCCGCCTTC GCCTCGCCGGCCAAGCGCCTCCGTAGGTCGCCGGCGCTCGAGCCCACCTCCGTGCTCTAC AACCGCAGCCCGAGCCCGCCCACATCCTCCTCCCTGGTCTCCTCCGCCGCGCCCGAGCCG CCCCCCATCAGCGCCGAGGATTGGGAGGCCGTCCTCTCCGGCGGCGACATGGCCGCGCCA CCAGCCGCCGCGCGGTCTCAAGACGCCTCTTTCCTCCGCTGGATCATGGACGCCGACGCC CAAGTCGACGCCTTCGATCCCTTCCTGCCTTGCCAAGAGACCGCCGTCGTCGAGCCCTTC TTGCAGCCGCAGCTCCCGCTCCCCGTGGCCGACGACCTCGAGCCAGGGGCGACGGTTGAC GAGCTCCTCGAGGCGGTGCGCCGCGCCGACGCCGGGGACTCCACTGGCGCGCGCGAGATA TTGGCGCGGCTCAATCACCGGCTCCCCTCACCGCCGGGGCACCCGCACCCTCCTATCCTC CGCGCCGCGGCTCACCTCCGGGACGCGCTCCTGCGCGTCCTCGTCACGTCCGCGCCCGCA CCCGCCGCCGTCTCGACGACCCCGCTCGACGTCGCGCTCAAGGTAGCCGCGCACAGGGCC CTGGCGGACGCGTCACCGACCGTCCAGTTCGCCAACTTCACGTCCACGCAGGCGCTCCTC GACGCGCTCGGCACCGCGCGCCGCGTGCACGTCGTCGACTTGGACGTCGGCTTCGGCGGC CGGTGGGCGCCGCTCATGCAGGAGCTCGCGCTCCAGTGGCGCCGAGCACCCGTCTCGCCG CTGCCGCCGCCGTGCTTGAAGGTGACGGCCTTGGTCTCGCCAGGGTCATCAGCGCACCCC TTGGAGCTCCACCTCACGCACCAGGGCCTGACGCGCTTCGCCGCCGACCTCGGCATCTCG TTCGAGTTCAACGCCGTCGCGTTCGACCCCTTGGACCCGTTGCCCCCCACGGGGCTGTCC GTCGCGCCCGGCGATGCCGTCGCCGTTCACCTCTCCGTCGGCTCCGGGGTCCCGTCGGCA GCTACTCTCCGCGTCGTGAAGCAGCTCCGCCCTGCCGTCGTGGTGTGCGTCGACCACGGA TGCCACCGCGGCGACCTGCCGCTGTCGCACCACGCGCTGAGCGTCGTGCGCTCCAGCGCG GCGTTCCTCGAGTCGCTGGACGCGGCCGGGGCGCCGGCGGACGCGGTGGCGAGGCTGGAG GAGTACGTCGTGCGTCCCAGGGTGGAGCGCCTGTTGCTAGGCGACAGGATGCCTCCATGG CGGACCATGCTTGACTCCGCCGGATTCGCGCCGGTGCAGCTCAGCAACGCCGCCGAGGCA CAGGCCGAATGCCTCGTCAGGCGCACGCCCACGCCGGGCTTCCATGTGGAGAAGCGGCAG GCGGCGCTCGCGTTGCGGTGGCAGGACTCGGAGCTGGTGATGGTGTCGGCGTGGCGGTGC TGA

Peptide Sequence

PEP ID	Zm00001d045589_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:27423699:27425201:-1 gene:Zm00001d045589 transcript:Zm00001d045589_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 32 description:Scarecrow-like protein 6
Sequence	MSELPDGGAGGNGQDEAAAFASPAKRLRRSPALEPTSVLYNRSPSPPTSSSLVSSAAPEP PPISAEDWEAVLSGGDMAAPPAAARSQDASFLRWIMDADAQVDAFDPFLPCQETAVVEPF LQPQLPLPVADDLEPGATVDELLEAVRRADAGDSTGAREILARLNHRLPSPPGHPHPPIL RAAAHLRDALLRVLVTSAPAPAAVSTTPLDVALKVAAHRALADASPTVQFANFTSTQALL DALGTARRVHVVDLDVGFGGRWAPLMQELALQWRRAPVSPLPPPCLKVTALVSPGSSAHP LELHLTHQGLTRFAADLGISFEFNAVAFDPLDPLPPTGLSVAPGDAVAVHLSVGSGVPSA ATLRVVKQLRPAVVVCVDHGCHRGDLPLSHHALSVVRSSAAFLESLDAAGAPADAVARLE EYVVRPRVERLLLGDRMPPWRTMLDSAGFAPVQLSNAAEAQAECLVRRTPTPGFHVEKRQ AALALRWQDSELVMVSAWRC

Transcript Sequence

Transcript ID	Zm00001d045589_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:27423699:27425201:-1 gene:Zm00001d045589 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 32 description:Scarecrow-like protein 6
Sequence	ATGTCTGAGCTCCCGGACGGCGGCGCCGGCGGAAATGGCCAAGACGAAGCCGCCGCCTTC GCCTCGCCGGCCAAGCGCCTCCGTAGGTCGCCGGCGCTCGAGCCCACCTCCGTGCTCTAC AACCGCAGCCCGAGCCCGCCCACATCCTCCTCCCTGGTCTCCTCCGCCGCGCCCGAGCCG CCCCCCATCAGCGCCGAGGATTGGGAGGCCGTCCTCTCCGGCGGCGACATGGCCGCGCCA CCAGCCGCCGCGCGGTCTCAAGACGCCTCTTTCCTCCGCTGGATCATGGACGCCGACGCC CAAGTCGACGCCTTCGATCCCTTCCTGCCTTGCCAAGAGACCGCCGTCGTCGAGCCCTTC TTGCAGCCGCAGCTCCCGCTCCCCGTGGCCGACGACCTCGAGCCAGGGGCGACGGTTGAC GAGCTCCTCGAGGCGGTGCGCCGCGCCGACGCCGGGGACTCCACTGGCGCGCGCGAGATA TTGGCGCGGCTCAATCACCGGCTCCCCTCACCGCCGGGGCACCCGCACCCTCCTATCCTC CGCGCCGCGGCTCACCTCCGGGACGCGCTCCTGCGCGTCCTCGTCACGTCCGCGCCCGCA CCCGCCGCCGTCTCGACGACCCCGCTCGACGTCGCGCTCAAGGTAGCCGCGCACAGGGCC CTGGCGGACGCGTCACCGACCGTCCAGTTCGCCAACTTCACGTCCACGCAGGCGCTCCTC GACGCGCTCGGCACCGCGCGCCGCGTGCACGTCGTCGACTTGGACGTCGGCTTCGGCGGC CGGTGGGCGCCGCTCATGCAGGAGCTCGCGCTCCAGTGGCGCCGAGCACCCGTCTCGCCG CTGCCGCCGCCGTGCTTGAAGGTGACGGCCTTGGTCTCGCCAGGGTCATCAGCGCACCCC TTGGAGCTCCACCTCACGCACCAGGGCCTGACGCGCTTCGCCGCCGACCTCGGCATCTCG TTCGAGTTCAACGCCGTCGCGTTCGACCCCTTGGACCCGTTGCCCCCCACGGGGCTGTCC GTCGCGCCCGGCGATGCCGTCGCCGTTCACCTCTCCGTCGGCTCCGGGGTCCCGTCGGCA GCTACTCTCCGCGTCGTGAAGCAGCTCCGCCCTGCCGTCGTGGTGTGCGTCGACCACGGA TGCCACCGCGGCGACCTGCCGCTGTCGCACCACGCGCTGAGCGTCGTGCGCTCCAGCGCG GCGTTCCTCGAGTCGCTGGACGCGGCCGGGGCGCCGGCGGACGCGGTGGCGAGGCTGGAG GAGTACGTCGTGCGTCCCAGGGTGGAGCGCCTGTTGCTAGGCGACAGGATGCCTCCATGG CGGACCATGCTTGACTCCGCCGGATTCGCGCCGGTGCAGCTCAGCAACGCCGCCGAGGCA CAGGCCGAATGCCTCGTCAGGCGCACGCCCACGCCGGGCTTCCATGTGGAGAAGCGGCAG GCGGCGCTCGCGTTGCGGTGGCAGGACTCGGAGCTGGTGATGGTGTCGGCGTGGCGGTGC TGA