Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045537_T019
CDS Infomation	cds chromosome:B73_RefGen_v4:9:25841125:25845147:-1 gene:Zm00001d045537 gene_biotype:protein_coding transcript_biotype:protein_coding description:CYCLOPS
Sequence	ATGCAAGCCAGTGACCTACTTCTAGCAAAAGCCTGGTTCCACAGCACTCAACCAATGACT AGAAGTCGTTCGTCAGAGTTAAGGAGGAGGTATGCTGCGATGCAAACTAATATGGCACCA ATAACAATAGGAAGCATTGAAACACCTAACCAATTAAAACAAGATTTTACAAACACAACA AACATCACACCAATGAGCAACACACTTGTTCATACACCAAAGTTTGTATCTCCTTCAAGT TCATCAACATCCCCTCTGGATAATCCACATGTGGCAGCACAAGATACTGTTACCTCAGTG GTGAGCATGCTCAAGGACACACTTGAGCGCAAGAAGCTTGGTAGCCATGCTAACAAAGAC ACCTCAGCAGGCAATTCTTTTGGATTCTATGACACTCAGCAGTTTCAACAAAACATTCTT GGAGGAACAGATTTCTTTCCCATAGTGACAACTGCCCAAGTTCAGGATTCCCTGATGCTT CCCAAGGTTGACAGGCCCATGGAACCAAACAATGGTAACTTCGTTGCTCCTGCAAACCAG GTTTGGTTCAGTGCAGCTTCTCGAGAGCCTTCACACAGTGGATCGTCTACTGCTATGACT ACTCATTCAGCTGGATTTGAAATGTGTGATGAGCTACCTCCTGCAGCGCAAGCGATGAGT GTTTGTGAGAGCACCAGAAAAAATGCTGCAAATGGAACAACCGACTGCAAATCAAAAGGC AAAGAGTATAGAGAGAGGGTACAAAAGGATAATTTGAAAGATGGGAGGAAGAAAGCAGCC CTAACTCGAATAGGATCCATTTCATCTGAACAAGCAGCTGATAATGGAGATCCTACAAAG AAGCGCAGGGTTGAGCGCTCACGCAAAATGGCAGAAGCAAAGGAAAGAAGTTCCACACCA GTAATACCATCTGATATGCAAGCCGTACTTAAACGCTGTGAAACCCTAGAGAAGGAGGTC CGATCACTAAAACTTAACCTGTCTTTCATGAACAGGAAAGATTCAGAACAGACCAAGCAG ATCGAGGAGCTTCAGAAGCAAAACGAGGATTTGGCCGAAGAGAAGGAGCGGCTGGTGGAA GAGATCGAAAGGATTGTCTCTGACCCCAACACATGA

Peptide Sequence

PEP ID	Zm00001d045537_P019
PEP Infomation	pep chromosome:B73_RefGen_v4:9:25841125:25845147:-1 gene:Zm00001d045537 transcript:Zm00001d045537_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:CYCLOPS
Sequence	MQASDLLLAKAWFHSTQPMTRSRSSELRRRYAAMQTNMAPITIGSIETPNQLKQDFTNTT NITPMSNTLVHTPKFVSPSSSSTSPLDNPHVAAQDTVTSVVSMLKDTLERKKLGSHANKD TSAGNSFGFYDTQQFQQNILGGTDFFPIVTTAQVQDSLMLPKVDRPMEPNNGNFVAPANQ VWFSAASREPSHSGSSTAMTTHSAGFEMCDELPPAAQAMSVCESTRKNAANGTTDCKSKG KEYRERVQKDNLKDGRKKAALTRIGSISSEQAADNGDPTKKRRVERSRKMAEAKERSSTP VIPSDMQAVLKRCETLEKEVRSLKLNLSFMNRKDSEQTKQIEELQKQNEDLAEEKERLVE EIERIVSDPNT

Transcript Sequence

Transcript ID	Zm00001d045537_T019
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:25841125:25845147:-1 gene:Zm00001d045537 gene_biotype:protein_coding transcript_biotype:protein_coding description:CYCLOPS
Sequence	AATACAGAGACATGATTTGGCGAGAGGTCCATGTTAGGGAAGGGAGGCTCCAAACCGGCG CTTTTCAGCCTTGCGTCAGTGTTTTATATATATGATTCAAATATGTCGCTGTAATGCCGA GTAAATCTATGGGCACTTATTAGACTGGCCATCCACTTCCTCCAATTGCTGCATCATGTT AGATGCTGTCAGTGTCAAAACACCTAGGACCAAGCTGCTGCAAATTAATCCTTGGACTAG GAATTCTGAGACGTGTTGTTGAATTCAAGCAGTGTACTGCTTTTCTGTTCATACATACAC CTAATATAGGCCGCTTGTGCGTGTTCATTGGCGCGAAAGTGGCCAAATTCTTCACTGGCC GATTTTTCCACTGATGAGACAAAATGAGGAGAACGGAATCTTTGCCTCCGATGAAGGGAA AGATACCTGCCATCACTTTGTTTAGTCCCAGCTAGCTAGTGCCACACTCAACTAGTACAT GTCTTCTGTGCTTGAACTCTTCTGCCAGGCACTATTTTTGTAAGGTTATTTGGTGCTTTA GGTGGGATTCTATTTTATATTATCTCATATGTTTCATTGCTTCTGTTGCTTGAATTTCAA GCGATTGTCCTTAGTAGCCCTGCTACTGCAACACTACTAAAGACAGCTTCTTGTGACTCC CGTTATCAATCTGGTCAATCGTTGCACCAGGAGAGGGGAGGGTGAGCTGAGAGGGGTTTC ATGGAGATGGAGGGCAGAGGCCTGTCTGATTTGTTCAGGAACACCAGCGAGGAGATCTTC CTCAAGGCAGTGATGGAGAACTCGATGGGAGTAGCAGCAGCGCCAAGCATGGAGATGCTG GGGTTCAAGAACACGTCGCGAAGTCTCAGAGAAGACAGCGAGGAGCTGTTCAACAACTGG CTTATGAATGGAGAGATCCCTGGATTTGGGTCAGTGAACAATCACCCTCGACAACCATCT AGGTTGTCATCAGAAGCCGCAGGCCTTCCGAATCAACAGCATGACATTGCTCAACAAAGT TTTCTCACTGACAACTTGGTTCCACAGAATTTAACAATTCCTTCTGTCGAATATCCAAAT AACCACAACCAGCAATCACTCAAGTACTGTATTTATACACCAACATCACCTTCCACAGTT TCTGAAAAAATAAAATTGCATTCTACTTTATGATCTATGTACTATAAGTTTTATTGACCT TGCTCTTTTGCCATAACAGAAATGCAGCAGAGAAGGGAATGCAAGCCAGTGACCTACTTC TAGCAAAAGCCTGGTTCCACAGCACTCAACCAATGACTAGAAGTCGTTCGTCAGAGTTAA GGAGGAGGTATGCTGCGATGCAAACTAATATGGCACCAATAACAATAGGAAGCATTGAAA CACCTAACCAATTAAAACAAGATTTTACAAACACAACAAACATCACACCAATGAGCAACA CACTTGTTCATACACCAAAGTTTGTATCTCCTTCAAGTTCATCAACATCCCCTCTGGATA ATCCACATGTGGCAGCACAAGATACTGTTACCTCAGTGGTGAGCATGCTCAAGGACACAC TTGAGCGCAAGAAGCTTGGTAGCCATGCTAACAAAGACACCTCAGCAGGCAATTCTTTTG GATTCTATGACACTCAGCAGTTTCAACAAAACATTCTTGGAGGAACAGATTTCTTTCCCA TAGTGACAACTGCCCAAGTTCAGGATTCCCTGATGCTTCCCAAGGTTGACAGGCCCATGG AACCAAACAATGGTAACTTCGTTGCTCCTGCAAACCAGGTTTGGTTCAGTGCAGCTTCTC GAGAGCCTTCACACAGTGGATCGTCTACTGCTATGACTACTCATTCAGCTGGATTTGAAA TGTGTGATGAGCTACCTCCTGCAGCGCAAGCGATGAGTGTTTGTGAGAGCACCAGAAAAA ATGCTGCAAATGGAACAACCGACTGCAAATCAAAAGGCAAAGAGTATAGAGAGAGGGTAC AAAAGGATAATTTGAAAGATGGGAGGAAGAAAGCAGCCCTAACTCGAATAGGATCCATTT CATCTGAACAAGCAGCTGATAATGGAGATCCTACAAAGAAGCGCAGGGTTGAGCGCTCAC GCAAAATGGCAGAAGCAAAGGAAAGAAGTTCCACACCAGTAATACCATCTGATATGCAAG CCGTACTTAAACGCTGTGAAACCCTAGAGAAGGAGGTCCGATCACTAAAACTTAACCTGT CTTTCATGAACAGGAAAGATTCAGAACAGACCAAGCAGATCGAGGAGCTTCAGAAGCAAA ACGAGGATTTGGCCGAAGAGAAGGAGCGGCTGGTGGAAGAGATCGAAAGGATTGTCTCTG ACCCCAACACATGACCGCCCAATCATTTCTGACATTTTTTTATATACTAATAGAATTAGA CTTGAAATGGTCCTAGATACAAATACACATACACAATCCAGCAGGGGGCAGCAAGAATTA AGTGCTGGCCTAAATGTACCATTCTTTCCTTGTTTTCACAAGTGTAACGTATACGAATAT CAACAAGCAAAGGGATCAGGGATTACAGT