Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045518_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:25254154:25256961:-1 gene:Zm00001d045518 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGAGGAAGCCAAGCGGCTGCACGCGCGCCTGCTCCGCCGTGGGGAGCGCCGCCTGCAG CCGCTACTCCTGCGCGTGCTGGCGGCGGGGGAACTGCGCTACGCCGCGCGCCTTCTCGGC TCCTGCCCCGCGTCTCCGCCCTCCGCGCCGCTCCACAACCGCCTGCTCCACGCGCTGGCC GCCGCGCGCCACCCGCTGCTGCTCCCTTGCTTCGCGCGCGCGCACCGCCTCCGCGTCCTC ACCCCGCTCTCCTTCACGCTTCTCCTCTCCTCCGCCACCGCCACGGCCGCCGCGTGCGCG CACGCTTTGCTGGCCAAGTCCGGCCACGCCGCGGCGGCGCCCGGCGACCCGTTCCTCGCG TCCGCGCTCGTCTCCTCCTACGCCAGGGCGGGGCTGCTGGCGGAGTCCCGCAGGGCGTTC GACGAGCTGCCTGCCGGGGCCGGGGCCGGGGCCGCGGCCGCGCGCAACGCGATGCTGTCG GCGTACGCGCGAGGCGGGCGCGTGGGCGACGCGGAGCGGCTGTTCGCGGGAATGCCCGAC CGGAGCGTGGTGTCGTGGACCGCGATGGTGTCGGGCTACGCGCAGAACGGGAGGCACGAG GAGGCGGTGCGCACGTTCCTGGACATGTGGGACGGGGCCGGGGTGCGGCCCAACGAGCTC ACCGTCAGCAGCGTCCTGCCCGCGTGCGCTGCGCTCGGGGCCCTCGCGCTGGGGAGGAAG GTGGAGCGCTACGCCAGGGGGAGAGGGATGCTCAGGAACGTCTATGTCGCCAACGCCTTG GTCGAGATGTACGCCAAGTGCGGCAGCATCCGCCGGGCTTGGAAGGTGTTTCGGGGCATG GGGACGCGGAGGGATCTTTGTTCTTGGAACTCCATGATCATGGCGTTTGCCGTGCATGGC CTCTGGACGGAGGCGCTGGCCTTGTTTCATAAACTGAGGATGACAGGGGCAAAACCAGAT GGCATTACATTTGTTGGAGTCATTTTGGCCTGTACTCATGGAGGCTTGGTGGATGAAGGC AAGCTGCTCTTCAACTCGATGAGAGGGGAGTTCGGTCTTAAGCCAAGAATCGAGCACTAT GGTTGCATGGTTGACCTGCTGGGGCGTGCTGGCCTGTTAAAAGAAGCTGACAGTCTGATC GCGAGCATGCCAATGGAGCCTGACGCCGTAATTTGGGGAGCCCTGCTTGGAGCCTGCAGC TTCCATGGCAACTTTGAACTAGCGGAAATAGCAGTGGAAAAACTAATGCACCTGGAGCCA CACAATACAGCTAACCTAGTGATTCTTTCGAATATATACGCGTCATGTGGCAAATGGGAC GGTGTTGCCCGGGTGTGGAAGCTGCTAAAGGAAAAAGATCACAAGAAATCTGCTGGGTAC AGCTTTATTGAGTTAGATGGTAGGATGCACAAGTTCCTGGTTGAAGATAAGTCGCATCCA AGATCTGAGAAGGTATATGACGCCCTGGATAGCATCACGCTGGCCATGAAGCTTGTCAGC TTGGAAAATCCTGAAGTGGAAAGCTGA

Peptide Sequence

PEP ID	Zm00001d045518_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:25254154:25256961:-1 gene:Zm00001d045518 transcript:Zm00001d045518_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MEEAKRLHARLLRRGERRLQPLLLRVLAAGELRYAARLLGSCPASPPSAPLHNRLLHALA AARHPLLLPCFARAHRLRVLTPLSFTLLLSSATATAAACAHALLAKSGHAAAAPGDPFLA SALVSSYARAGLLAESRRAFDELPAGAGAGAAAARNAMLSAYARGGRVGDAERLFAGMPD RSVVSWTAMVSGYAQNGRHEEAVRTFLDMWDGAGVRPNELTVSSVLPACAALGALALGRK VERYARGRGMLRNVYVANALVEMYAKCGSIRRAWKVFRGMGTRRDLCSWNSMIMAFAVHG LWTEALALFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKLLFNSMRGEFGLKPRIEHY GCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSFHGNFELAEIAVEKLMHLEP HNTANLVILSNIYASCGKWDGVARVWKLLKEKDHKKSAGYSFIELDGRMHKFLVEDKSHP RSEKVYDALDSITLAMKLVSLENPEVES

Transcript Sequence

Transcript ID	Zm00001d045518_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:25254154:25256961:-1 gene:Zm00001d045518 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGAGGAAGCCAAGCGGCTGCACGCGCGCCTGCTCCGCCGTGGGGAGCGCCGCCTGCAG CCGCTACTCCTGCGCGTGCTGGCGGCGGGGGAACTGCGCTACGCCGCGCGCCTTCTCGGC TCCTGCCCCGCGTCTCCGCCCTCCGCGCCGCTCCACAACCGCCTGCTCCACGCGCTGGCC GCCGCGCGCCACCCGCTGCTGCTCCCTTGCTTCGCGCGCGCGCACCGCCTCCGCGTCCTC ACCCCGCTCTCCTTCACGCTTCTCCTCTCCTCCGCCACCGCCACGGCCGCCGCGTGCGCG CACGCTTTGCTGGCCAAGTCCGGCCACGCCGCGGCGGCGCCCGGCGACCCGTTCCTCGCG TCCGCGCTCGTCTCCTCCTACGCCAGGGCGGGGCTGCTGGCGGAGTCCCGCAGGGCGTTC GACGAGCTGCCTGCCGGGGCCGGGGCCGGGGCCGCGGCCGCGCGCAACGCGATGCTGTCG GCGTACGCGCGAGGCGGGCGCGTGGGCGACGCGGAGCGGCTGTTCGCGGGAATGCCCGAC CGGAGCGTGGTGTCGTGGACCGCGATGGTGTCGGGCTACGCGCAGAACGGGAGGCACGAG GAGGCGGTGCGCACGTTCCTGGACATGTGGGACGGGGCCGGGGTGCGGCCCAACGAGCTC ACCGTCAGCAGCGTCCTGCCCGCGTGCGCTGCGCTCGGGGCCCTCGCGCTGGGGAGGAAG GTGGAGCGCTACGCCAGGGGGAGAGGGATGCTCAGGAACGTCTATGTCGCCAACGCCTTG GTCGAGATGTACGCCAAGTGCGGCAGCATCCGCCGGGCTTGGAAGGTGTTTCGGGGCATG GGGACGCGGAGGGATCTTTGTTCTTGGAACTCCATGATCATGGCGTTTGCCGTGCATGGC CTCTGGACGGAGGCGCTGGCCTTGTTTCATAAACTGAGGATGACAGGGGCAAAACCAGAT GGCATTACATTTGTTGGAGTCATTTTGGCCTGTACTCATGGAGGCTTGGTGGATGAAGGC AAGCTGCTCTTCAACTCGATGAGAGGGGAGTTCGGTCTTAAGCCAAGAATCGAGCACTAT GGTTGCATGGTTGACCTGCTGGGGCGTGCTGGCCTGTTAAAAGAAGCTGACAGTCTGATC GCGAGCATGCCAATGGAGCCTGACGCCGTAATTTGGGGAGCCCTGCTTGGAGCCTGCAGC TTCCATGGCAACTTTGAACTAGCGGAAATAGCAGTGGAAAAACTAATGCACCTGGAGCCA CACAATACAGCTAACCTAGTGATTCTTTCGAATATATACGCGTCATGTGGCAAATGGGAC GGTGTTGCCCGGGTGTGGAAGCTGCTAAAGGAAAAAGATCACAAGAAATCTGCTGGGTAC AGCTTTATTGAGTTAGATGGTAGGATGCACAAGTTCCTGGTTGAAGATAAGTCGCATCCA AGATCTGAGAAGGTATATGACGCCCTGGATAGCATCACGCTGGCCATGAAGCTTGTCAGC TTGGAAAATCCTGAAGTGGAAAGCTGATTTTAACGTCACCATCTTCTATCCCTTTTATTT ATGGGAGAAGAAACTGAGAAAACCATTTGAGATTGGTCATGGACTTCTTGCTCAGATCCT CCATATCAAGTGAATGCACCACCTGAATATCAATGGATTTTTCCTCTACTACGAAATGGT CATTTCTCTTGTTCTTACAATGAATAATTCAGAGGTGCAAGTGCACCAGACAGATAGAAG CATATCATTGCATGACATACCCAAAGCAGATCATCATGGAAGACACTAGAGGAACTTTCA GACTGTGGGGTTATGCATGAGATTGGTTGGAACTATGACGCAGGAATGACCGGGGTTGTA TACCATATTCTCATGGTTGCCTTCACTTGGCAGCCGTGGTTTGGAGCGCACCCTCATATT GGGTGCAGCCTTGGAAGCAAGGCAAACATGCCCCCCGTCCGCCTTTGCAGTATATGTTTT GGCATGCTTCATTGGATTTACCGTGTTCCTTAGTTTTCTTTTATATATATAGCTGCGGCT CATATGTTGAACAAGTTTACAGCTTTTATCTGAGCACTTCATTTGTGCACTATGGATCAG TCTGGATTCTATCAAACTTGGAAATGACTGCTGCTTCTTAAGGTGTGAACGCACCGGCAC AAACAAGCAGAAAGATCTGCTCAGACTGGACACTTCCAGAAGGACACTGGTCAACGTTCA GAAATTGCCATGTGATTGTGGAAGAAAAGAACAATTTCACCGGGTCAGTTTCACTTTAGG AGCATAACCATAACGTTAGATGCTTGACGATGACTTGTAAATGCTGACGAAATGAACATG ACGCAGCATCTTCCTTCTACTTTTGTCGCTGTTTCTCTTGTTGAAATAACCGGGGTAATG GTCTTGTTTCTTGTCCTTTTGCATTTTAAAAGCTGGGTGATCCTGGAAG