Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045516_T023
CDS Infomation

cds chromosome:B73_RefGen_v4:9:25243925:25249507:1 gene:Zm00001d045516 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable transcriptional regulator SLK2
Sequence

ATGGTGCTGGAGCATGCAAAAGTAGTTCAAAAAAGTGTTTATGAACATCTGCATGTTATA
CACGAGGGACATCTGAGAATAATTTTCACACCAGAACTGAAGATAATGTCTTGGGAGTTC
TGTTCACGACGCCATGAGGAGTACACCACTCGCAAGACTATAGCACCACAGGTTAATAAT
CTTCTGCAAGTTGCCCAGAAATTCCAAGCTGTTGTCAGTGAAAGTGGATCAGCTGGGATA
TCAAATAATGATGCACAAACCATCTGCAACATGTTTGTTAATGCATCACGGCAACTGGCA
AAAAATCTAGAGCATCACACCTTAAATGAACATGGGCTTTCTAAAAGATATGTACGCTGC
CTGCAGATATCGGAGGTGGTGAATCACATGAAGGACTTGATCGAGTTCAGCCACAAGAGC
AAGCTTGGTCCTAAAGAGAGCCTGAACAGTTATTCTAAAACCACGGCAAAGTTTGAGAAT
ATGCATGATTCGAGACAGGCCATGGCTGCCGCTAACCTTGCCAACAACCAGAGCAACACC
AAATTGATGGGGGTCAAACAAGAGACAAGCACTTCTGCGAACAACCAGACTCCTGGTGCC
GGAGCCATTGGCAACAACAATCTACCGATTGCCGCACCTCTAAACACCTACCAGAACATG
CTCAGAAGCTCAGGTGCCAGTACGATTTCGCTGCAGCAGGAGGCGTCGAGTGTCTTCAAA
GGTCCTACAGCAATGCACAACGGCATGCAGCTGGAAGCGGCCAGGTCCTTCCTGGGACCT
AACCAAGTTCAATTCCAGCACCACCCACCGTCGTCGTCGTTTCAGCAGCAGCAGCAAAAC
AGTTTCCATGGCTTTGGTGTCAACCCGCAGTACCAGCAGCATGTCCTCAACCAGCTTCTG
CAGGAAGTTAAGAACAGTAACAACCGCTCGAAAGCGCAGCAACCGCCTCTGGATGCACCA
CCGCCGAATGCGAGCGGCGGGGGTCTCGCGCCAGGAGTTGCTACCCCCAACGTCATTGCT
GCTACTGGGGAGCAGGGGCAGCATGTCAATAACAGTAGCTCTAACCATAACGGCACGGTA
AAGGGTGCTGCTGGTACTGGCCCTAGCAATGTCATCAACAATAGCACAGCCAGCATGGCT
TCGGCCAGAAACAGCAGCTTCAAGTCGGTGAGCAGCAGTCCAGCTGCTGCTGGCAATGCC
GTGAGCTCGAAGGTCGATGACTCCTTCCATCAACTGGAGGACCTCGACGACATGATCGCT
AACGAACTGGTGGAGAGCGGGCTGTTCGGTGCAGGACACGGGTGG

Peptide Sequence

PEP ID

Zm00001d045516_P023
PEP Infomation

pep chromosome:B73_RefGen_v4:9:25243925:25249507:1 gene:Zm00001d045516 transcript:Zm00001d045516_T023 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable transcriptional regulator SLK2
Sequence

MVLEHAKVVQKSVYEHLHVIHEGHLRIIFTPELKIMSWEFCSRRHEEYTTRKTIAPQVNN
LLQVAQKFQAVVSESGSAGISNNDAQTICNMFVNASRQLAKNLEHHTLNEHGLSKRYVRC
LQISEVVNHMKDLIEFSHKSKLGPKESLNSYSKTTAKFENMHDSRQAMAAANLANNQSNT
KLMGVKQETSTSANNQTPGAGAIGNNNLPIAAPLNTYQNMLRSSGASTISLQQEASSVFK
GPTAMHNGMQLEAARSFLGPNQVQFQHHPPSSSFQQQQQNSFHGFGVNPQYQQHVLNQLL
QEVKNSNNRSKAQQPPLDAPPPNASGGGLAPGVATPNVIAATGEQGQHVNNSSSNHNGTV
KGAAGTGPSNVINNSTASMASARNSSFKSVSSSPAAAGNAVSSKVDDSFHQLEDLDDMIA
NELVESGLFGAGHGW

Transcript Sequence

Transcript ID

Zm00001d045516_T023
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:25243925:25249507:1 gene:Zm00001d045516 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable transcriptional regulator SLK2
Sequence

AGAATAACCCTATAACATACTGGAGGAAGCTTGTTGAAGAGTACTTCGCACCTCGAGCAA
GAGAAAGATGGTGTGTCTCTTCTTATGAAAACAGAGGGAATTCTTCAGCTGCTGCTCCAC
AGAAAGCTTTGGATACGTGGCGATGTGGCATTTGCAATACACATGGTGGGAAAGGATATG
AAGTTACCTATGAAGTACTTCCTAGGCTCTGCCAAATTAGATTTGACCATGGTGTTATTG
ATGAATACTTATACTTTGACTCACCCAACGAATTCCGGTTGCCTAATGGACAAATGGTGC
TGGAGCATGCAAAAGTAGTTCAAAAAAGTGTTTATGAACATCTGCATGTTATACACGAGG
GACATCTGAGAATAATTTTCACACCAGAACTGAAGATAATGTCTTGGGAGTTCTGTTCAC
GACGCCATGAGGAGTACACCACTCGCAAGACTATAGCACCACAGGTTAATAATCTTCTGC
AAGTTGCCCAGAAATTCCAAGCTGTTGTCAGTGAAAGTGGATCAGCTGGGATATCAAATA
ATGATGCACAAACCATCTGCAACATGTTTGTTAATGCATCACGGCAACTGGCAAAAAATC
TAGAGCATCACACCTTAAATGAACATGGGCTTTCTAAAAGATATGTACGCTGCCTGCAGA
TATCGGAGGTGGTGAATCACATGAAGGACTTGATCGAGTTCAGCCACAAGAGCAAGCTTG
GTCCTAAAGAGAGCCTGAACAGTTATTCTAAAACCACGGCAAAGTTTGAGAATATGCATG
ATTCGAGACAGGCCATGGCTGCCGCTAACCTTGCCAACAACCAGAGCAACACCAAATTGA
TGGGGGTCAAACAAGAGACAAGCACTTCTGCGAACAACCAGACTCCTGGTGCCGGAGCCA
TTGGCAACAACAATCTACCGATTGCCGCACCTCTAAACACCTACCAGAACATGCTCAGAA
GCTCAGGTGCCAGTACGATTTCGCTGCAGCAGGAGGCGTCGAGTGTCTTCAAAGGTCCTA
CAGCAATGCACAACGGCATGCAGCTGGAAGCGGCCAGGTCCTTCCTGGGACCTAACCAAG
TTCAATTCCAGCACCACCCACCGTCGTCGTCGTTTCAGCAGCAGCAGCAAAACAGTTTCC
ATGGCTTTGGTGTCAACCCGCAGTACCAGCAGCATGTCCTCAACCAGCTTCTGCAGGAAG
TTAAGAACAGTAACAACCGCTCGAAAGCGCAGCAACCGCCTCTGGATGCACCACCGCCGA
ATGCGAGCGGCGGGGGTCTCGCGCCAGGAGTTGCTACCCCCAACGTCATTGCTGCTACTG
GGGAGCAGGGGCAGCATGTCAATAACAGTAGCTCTAACCATAACGGCACGGTAAAGGGTG
CTGCTGGTACTGGCCCTAGCAATGTCATCAACAATAGCACAGCCAGCATGGCTTCGGCCA
GAAACAGCAGCTTCAAGTCGGTGAGCAGCAGTCCAGCTGCTGCTGGCAATGCCGTGAGCT
CGAAGGTCGATGACTCCTTCCATCAACTGGAGGACCTCGACGACATGATCGCTAACGAAC
TGGTGGAGAGCGGGCTGTTCGGTGCAGGACACGGGTGGT