Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045507_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:24956261:24958111:1 gene:Zm00001d045507 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 42 description:Scarecrow-like protein 28
Sequence	ATGTTGGCTGGTTGCTCCTTCTCGTCGTCGAGGCATCAGATGAGCACCGCGCAGCGATTC GACATCCTCCCCTACGGCTTCTCCAAGCGGGCGAGCAACCGCGGCGATGGCTCCGGCGCC GCGCCGCGCGTCGCGGCGCCCGACGCCAGGAGCGGTGGCGGCGGCGGCACCTGCTCCTTC CGCGCCCACCCGGCGCCGCCAGTCACGCAGGCCGTTTCCTGGGGCGCCAAGCCGGAGCCC GGCGGCAATGGCGCTGCGTGGGAGAGGAGCAGGGCCGTTAAGCGGGCCCATGAGGAAGAC GCAGGCGAGGAGTACGGCGGCCCCGTCGTTCGCGCCAAGCGGACGAGGATGGGCGGGGAC GGGGATAAGGTATGGTTCCATCGATCCATTGCAGGGACAGTGCAAGCGGCCGGGTCCGGC GACGGACACGAAGCCGAGGAAGAGAAGGCCTTCCTGGTGCCGAGCGCCGCGGCGTTCCCC CACGGCATGTCCGCCGCCGCCGCGGGCCCGTCGCTGGCCGTGGCCAAGAAAGAGGAGTTC AGCAAGTCGCCGTCCAACTCGCCGGCCTCGTCGGGCGGCACGGACGGCGGCTCGTCGGCT GTCCCGTGGCCGGAGCAGCTCCACGCGCAGAACGGCGCCGCGGCGCGGGTGGAGGCCATG GAGCTCGTCGTCGCGCTCACCGCCTGCGCCGACTCCGTCGCCGCCTGCAACCACGACGCC GCCAACTACTACCTGGCGCGGCTGGGCGAGATGGCCTCCCCCGCGGGGCCCACGCCGATG CACCGCGTGGCCGCCTACTTCGCGGAGGCGCTCACGCTGCGCGTGGTGCGCATGTGGCCC CAGGTGTTCGACGTTAGCCCGCCGCGCGAGCTCACCGACGGCGCCGTCGCCGCCGACGAC GACGCGACGGCGCTGCGGGTGCTCAACGCCGTCACCCCGATCCCGCGCTTCCTGCACTTC ACCCTCAACGAGCGGGTGCTCCGCGCGTTCGACGGCCACGACCGCGTCCACGTCATTGAC TTCGACATCAAGCAGGGGCTGCAGTGGCCGGGCCTCCTCCAGAGCCTCGCCACGCGCGTG GCTCCCCCGGCGCACGTGCGGATCACCGGCGTCGGCGAGTCAAGACAGGAGCTGCAGGAG ACCGGCGCGCGGCTGGGGCGCGTGGCCGCCGCGCTCGGGCTCGCGTTCGAGTTCCACGCC GTGGTGGACCGCCTCGAGGACGTCCGCCTGTGGATGCTCCACGTGAAGCGCGGCGAGTGC GTCGCCGTGAACTGCGTCCTCGCGGCGCACCGCCTGCTCCGCGACGAGACCGGCGCCGCG GTGGCCGACTTCCTCGGGCTCACGCGCAGCACGGGCGCCGCCATCCTCCTCCTGGGCGAG CACGAGGACGCCCTCAACTCCGGGCGGTGGGAGGCGCGGTTCGCGCGCGCGCTGCGGTAC TACGCCGCGGCGTTCGACGCCGTGGAGGCGGCTGGGCTGGCGGACGCCAGCCCCGCGAGG GCCAAGGCGGAGGAGATGTTCGCGCGGGAGATCCGCAACGCGGTGGCGTTCGAGGCCGCG GACCGCTTCGAGCGGCACGAGACCTTCACCGGGTGGCGGCAGCGCATGCAGGAAGGCGGG TTCCAGAACGCCGGCATCGGCGACCGGGAGGCGTTGCAGGGGCGCATGATCGCGAGGATG TTCGCGCCGGGCAACTACAGCGTGCAGGTGCAGGGCGACGGCGAGGGGCTCACGCTCCGG TGGATGGACCAGGCCATGTACACCGTGTCCGCGTGGACGCCGGTCAGCGACGGGGGCAGC ACGGTGTCTGCGTCTGTCTCCACCACAGCATCCCATTCTCAGCATAGCTGA

Peptide Sequence

PEP ID	Zm00001d045507_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:24956261:24958111:1 gene:Zm00001d045507 transcript:Zm00001d045507_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 42 description:Scarecrow-like protein 28
Sequence	MLAGCSFSSSRHQMSTAQRFDILPYGFSKRASNRGDGSGAAPRVAAPDARSGGGGGTCSF RAHPAPPVTQAVSWGAKPEPGGNGAAWERSRAVKRAHEEDAGEEYGGPVVRAKRTRMGGD GDKVWFHRSIAGTVQAAGSGDGHEAEEEKAFLVPSAAAFPHGMSAAAAGPSLAVAKKEEF SKSPSNSPASSGGTDGGSSAVPWPEQLHAQNGAAARVEAMELVVALTACADSVAACNHDA ANYYLARLGEMASPAGPTPMHRVAAYFAEALTLRVVRMWPQVFDVSPPRELTDGAVAADD DATALRVLNAVTPIPRFLHFTLNERVLRAFDGHDRVHVIDFDIKQGLQWPGLLQSLATRV APPAHVRITGVGESRQELQETGARLGRVAAALGLAFEFHAVVDRLEDVRLWMLHVKRGEC VAVNCVLAAHRLLRDETGAAVADFLGLTRSTGAAILLLGEHEDALNSGRWEARFARALRY YAAAFDAVEAAGLADASPARAKAEEMFAREIRNAVAFEAADRFERHETFTGWRQRMQEGG FQNAGIGDREALQGRMIARMFAPGNYSVQVQGDGEGLTLRWMDQAMYTVSAWTPVSDGGS TVSASVSTTASHSQHS

Transcript Sequence

Transcript ID	Zm00001d045507_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:24956261:24958111:1 gene:Zm00001d045507 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 42 description:Scarecrow-like protein 28
Sequence	ATGTTGGCTGGTTGCTCCTTCTCGTCGTCGAGGCATCAGATGAGCACCGCGCAGCGATTC GACATCCTCCCCTACGGCTTCTCCAAGCGGGCGAGCAACCGCGGCGATGGCTCCGGCGCC GCGCCGCGCGTCGCGGCGCCCGACGCCAGGAGCGGTGGCGGCGGCGGCACCTGCTCCTTC CGCGCCCACCCGGCGCCGCCAGTCACGCAGGCCGTTTCCTGGGGCGCCAAGCCGGAGCCC GGCGGCAATGGCGCTGCGTGGGAGAGGAGCAGGGCCGTTAAGCGGGCCCATGAGGAAGAC GCAGGCGAGGAGTACGGCGGCCCCGTCGTTCGCGCCAAGCGGACGAGGATGGGCGGGGAC GGGGATAAGGTATGGTTCCATCGATCCATTGCAGGGACAGTGCAAGCGGCCGGGTCCGGC GACGGACACGAAGCCGAGGAAGAGAAGGCCTTCCTGGTGCCGAGCGCCGCGGCGTTCCCC CACGGCATGTCCGCCGCCGCCGCGGGCCCGTCGCTGGCCGTGGCCAAGAAAGAGGAGTTC AGCAAGTCGCCGTCCAACTCGCCGGCCTCGTCGGGCGGCACGGACGGCGGCTCGTCGGCT GTCCCGTGGCCGGAGCAGCTCCACGCGCAGAACGGCGCCGCGGCGCGGGTGGAGGCCATG GAGCTCGTCGTCGCGCTCACCGCCTGCGCCGACTCCGTCGCCGCCTGCAACCACGACGCC GCCAACTACTACCTGGCGCGGCTGGGCGAGATGGCCTCCCCCGCGGGGCCCACGCCGATG CACCGCGTGGCCGCCTACTTCGCGGAGGCGCTCACGCTGCGCGTGGTGCGCATGTGGCCC CAGGTGTTCGACGTTAGCCCGCCGCGCGAGCTCACCGACGGCGCCGTCGCCGCCGACGAC GACGCGACGGCGCTGCGGGTGCTCAACGCCGTCACCCCGATCCCGCGCTTCCTGCACTTC ACCCTCAACGAGCGGGTGCTCCGCGCGTTCGACGGCCACGACCGCGTCCACGTCATTGAC TTCGACATCAAGCAGGGGCTGCAGTGGCCGGGCCTCCTCCAGAGCCTCGCCACGCGCGTG GCTCCCCCGGCGCACGTGCGGATCACCGGCGTCGGCGAGTCAAGACAGGAGCTGCAGGAG ACCGGCGCGCGGCTGGGGCGCGTGGCCGCCGCGCTCGGGCTCGCGTTCGAGTTCCACGCC GTGGTGGACCGCCTCGAGGACGTCCGCCTGTGGATGCTCCACGTGAAGCGCGGCGAGTGC GTCGCCGTGAACTGCGTCCTCGCGGCGCACCGCCTGCTCCGCGACGAGACCGGCGCCGCG GTGGCCGACTTCCTCGGGCTCACGCGCAGCACGGGCGCCGCCATCCTCCTCCTGGGCGAG CACGAGGACGCCCTCAACTCCGGGCGGTGGGAGGCGCGGTTCGCGCGCGCGCTGCGGTAC TACGCCGCGGCGTTCGACGCCGTGGAGGCGGCTGGGCTGGCGGACGCCAGCCCCGCGAGG GCCAAGGCGGAGGAGATGTTCGCGCGGGAGATCCGCAACGCGGTGGCGTTCGAGGCCGCG GACCGCTTCGAGCGGCACGAGACCTTCACCGGGTGGCGGCAGCGCATGCAGGAAGGCGGG TTCCAGAACGCCGGCATCGGCGACCGGGAGGCGTTGCAGGGGCGCATGATCGCGAGGATG TTCGCGCCGGGCAACTACAGCGTGCAGGTGCAGGGCGACGGCGAGGGGCTCACGCTCCGG TGGATGGACCAGGCCATGTACACCGTGTCCGCGTGGACGCCGGTCAGCGACGGGGGCAGC ACGGTGTCTGCGTCTGTCTCCACCACAGCATCCCATTCTCAGCATAGCTGA