Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045482_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:9:24090988:24097860:-1 gene:Zm00001d045482 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
Sequence	ATGGCTATGATTGATGAGCCTCTGTACCCAATTGCTGTACTGATTGATGAGCTTAAGAAT GAGGACATCCAGTTGCGTCTAAACTCCATTAGAAGACTTTCGACAATTGCACGGGCTCTT GGAGAAGAAAGAACCAGGAAGGAGCTGATTCCCTTTCTTAGTGAAAACAATGACGATGAA GATGAGGTGCTTCTTGCAATGGCTGAGGAATTGGGTGTGTTCATTCCTTATGTTGGGGGT GTAGAACATGCTCATGTTTTGCTTCCCCCTTTGGAAACATTGTGTACAGTAGAAGAAACT TGTGTCCGTGATAAGGCAGTTGAATCTCTGTGCCGTATTGGTGCACAAATGAAGGAAACT GACATAGTCGACTGGTTCATTCCAGTAGTAAAGAGGCTAGCAGCTGGTGAGTGGTTTACA GCTCGTGTATCATCCTGTGGTCTTTTCCACATAGCCTATCCAAGTGCATTGGACCAATTG AAAACAGAATTAAGGACTATCTATGGTCAGTTATGTCAGGATGACATGCCTATGGTCAGA AGAGCTGCTGCATCAAATCTTGGAAAGTTTGCAGCCACAGTTGAACAGAATCATTTGAAG ACAGAAATAATGTCAATATTTGATGACTTAACCCAAGATGTTGCAGGAATCATCTCTTGT TCCCTGTCTTTCTTGTTTGAGATAACTGTTTGTGAATTGTCATCAGATTCATCCCAGCAT GTTCGTTCAGCTTTAGCCTCAGTCATTATGGGAATGGCTCCTGTACTGGGAAAGGATGCT ACCATGGAACAGCTTCTTCCAATTTTTCTCTCTTTGCTGAAGGATGAATTTCCAGATGTT CGGCTTAACATAATCAGCAAGCTTGATCAGGTTAATCAGGTTATTGGCATTGACTTTTTA TCCCAAACACTGCTACCAGCCATTGTAGAACTTGCAGAGGATAGGCACTGGAGAGTCCGG CTTGCAATAATTGAGTACATCCCATTGCTGGCGAGTCAGTTAGGTGTTGGGTTTTTTGAT GACAAGCTGGGGGCACTCTGCATGCAATGGTTGGAAGATAAGGTCTTCTCAATCAGAGAT GCTGCCGCCAACAACTTGAAGCGCCTTGCGGAAGAGTTCGGTCCAGAGTGGGCAATGCAG CATATAATTCCTCAGGTGCTGGAGAAGATCAACAATCCGCACTATTTGTACCGCATGACG ATTCTGCAGGCTATCTCCTTGCTAGCTCCCGTCATGGGTGCAGAGATCACTTGTCAAAAG CTGCTTCCAGTCGTCATTAATTCTTCAAAGGACAGGGTTCCTAACATCAAGTTCAACGTT GCAAAAGTACTAAAGTCACTTGTACCGATCCTCGATCAATCTGTCGTGGAGAAGACCGTG AAACCATGCCTTGTTGAGCTCAGCGAGGACCCTGACGTCGATGTGAGGTACTACGCGAAC CAGGCGCTGCAGGCGTGCGATCAAATGATGGTGTCGAGCTAA

Peptide Sequence

PEP ID	Zm00001d045482_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:9:24090988:24097860:-1 gene:Zm00001d045482 transcript:Zm00001d045482_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
Sequence	MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKET DIVDWFIPVVKRLAAGEWFTARVSSCGLFHIAYPSALDQLKTELRTIYGQLCQDDMPMVR RAAASNLGKFAATVEQNHLKTEIMSIFDDLTQDVAGIISCSLSFLFEITVCELSSDSSQH VRSALASVIMGMAPVLGKDATMEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDFL SQTLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRD AAANNLKRLAEEFGPEWAMQHIIPQVLEKINNPHYLYRMTILQAISLLAPVMGAEITCQK LLPVVINSSKDRVPNIKFNVAKVLKSLVPILDQSVVEKTVKPCLVELSEDPDVDVRYYAN QALQACDQMMVSS

Transcript Sequence

Transcript ID	Zm00001d045482_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:24090988:24097860:-1 gene:Zm00001d045482 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
Sequence	CGGATCGTATCTGAGAACGGGTCGACCGCCCTTTCAGGCCCAGGCCCACTTCGCACGCCC CACAGGCCTCGACATCCACTGCGTCCCCTCCTCCCCCGTCGCATTCTGCAGCGCCAGCTC GCTCCTCGCCCCGCCCCCTTCTCTCAGCGGCGACGCCTCGGGCGTTCCTACCCTGCCCCC TCTCCGGACCCCCACGCCGTCGGCGAAGCAGCCGGGCAAGAGCCCGATCCAGACCCCGCG AGCAATCCTTGATATACCTGATGGCTATGATTGATGAGCCTCTGTACCCAATTGCTGTAC TGATTGATGAGCTTAAGAATGAGGACATCCAGTTGCGTCTAAACTCCATTAGAAGACTTT CGACAATTGCACGGGCTCTTGGAGAAGAAAGAACCAGGAAGGAGCTGATTCCCTTTCTTA GTGAAAACAATGACGATGAAGATGAGGTGCTTCTTGCAATGGCTGAGGAATTGGGTGTGT TCATTCCTTATGTTGGGGGTGTAGAACATGCTCATGTTTTGCTTCCCCCTTTGGAAACAT TGTGTACAGTAGAAGAAACTTGTGTCCGTGATAAGGCAGTTGAATCTCTGTGCCGTATTG GTGCACAAATGAAGGAAACTGACATAGTCGACTGGTTCATTCCAGTAGTAAAGAGGCTAG CAGCTGGTGAGTGGTTTACAGCTCGTGTATCATCCTGTGGTCTTTTCCACATAGCCTATC CAAGTGCATTGGACCAATTGAAAACAGAATTAAGGACTATCTATGGTCAGTTATGTCAGG ATGACATGCCTATGGTCAGAAGAGCTGCTGCATCAAATCTTGGAAAGTTTGCAGCCACAG TTGAACAGAATCATTTGAAGACAGAAATAATGTCAATATTTGATGACTTAACCCAAGATG TTGCAGGAATCATCTCTTGTTCCCTGTCTTTCTTGTTTGAGATAACTGTTTGTGAATTGT CATCAGATTCATCCCAGCATGTTCGTTCAGCTTTAGCCTCAGTCATTATGGGAATGGCTC CTGTACTGGGAAAGGATGCTACCATGGAACAGCTTCTTCCAATTTTTCTCTCTTTGCTGA AGGATGAATTTCCAGATGTTCGGCTTAACATAATCAGCAAGCTTGATCAGGTTAATCAGG TTATTGGCATTGACTTTTTATCCCAAACACTGCTACCAGCCATTGTAGAACTTGCAGAGG ATAGGCACTGGAGAGTCCGGCTTGCAATAATTGAGTACATCCCATTGCTGGCGAGTCAGT TAGGTGTTGGGTTTTTTGATGACAAGCTGGGGGCACTCTGCATGCAATGGTTGGAAGATA AGGTCTTCTCAATCAGAGATGCTGCCGCCAACAACTTGAAGCGCCTTGCGGAAGAGTTCG GTCCAGAGTGGGCAATGCAGCATATAATTCCTCAGGTGCTGGAGAAGATCAACAATCCGC ACTATTTGTACCGCATGACGATTCTGCAGGCTATCTCCTTGCTAGCTCCCGTCATGGGTG CAGAGATCACTTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCAAAGGACAGGGTTC CTAACATCAAGTTCAACGTTGCAAAAGTACTAAAGTCACTTGTACCGATCCTCGATCAAT CTGTCGTGGAGAAGACCGTGAAACCATGCCTTGTTGAGCTCAGCGAGGACCCTGACGTCG ATGTGAGGTACTACGCGAACCAGGCGCTGCAGGCGTGCGATCAAATGATGGTGTCGAGCT AACTAGCCGTGTGCCCGAGTACTTAGAGTTCGATGCCTCATAGTCCAATTTTGGATTACC TGTAATTTGTTGGGCCTTTTAGATTGAAGAGTTTTCCGTCTAGCCTCGGTGGCTGATAAA TGGACGGTCCTGATCCATTGTTCGTTGTGTTATTAATGTTGTATAATTGAGCAGGACACA ACACGTACGTTACTCTCTGTGTCTGTGTGTGTTTGCATGGCATTGTCTCGCAGGT